Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for pdlim5a

Gene Name Gene ID Reads Annotation
pdlim5a ENSDARG00000101777 357 PDZ and LIM domain 5a [Source:ZFIN;Acc:ZDB-GENE-040718-401]










Genes with expression patterns similar to pdlim5a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pdlim5a ENSDARG00000101777 357 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 PDZ and LIM domain 5a [Source:ZFIN;Acc:ZDB-GENE-040718-401]
2. AKT3 AKT3 1729 2.493 - 0.784 - - - 0.819 - - 0.890
3. irx5a ENSDARG00000034043 1694 2.405 - - - - - 0.772 0.718 - 0.915 iroquois homeobox 5a [Source:ZFIN;Acc:ZDB-GENE-010716-2]
4. kcnn1b ENSDARG00000023546 152 2.258 0.778 - - - - 0.778 - 0.702 - potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1b [Source:ZFIN;Acc:ZDB-GENE-060503-397]
5. rdh12 ENSDARG00000018069 396 1.864 - 0.983 - - - 0.881 - - - retinol dehydrogenase 12 [Source:ZFIN;Acc:ZDB-GENE-040718-9]
6. dopey1 438 1.86 - 0.949 - - - - - - 0.911 dopey family member 1, transcript variant X4
7. st8sia5 ENSDARG00000036584 529 1.826 - - - - - 0.901 - - 0.925 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 [Source:ZFIN;Acc:ZDB-GENE-060322-8]
8. caly ENSDARG00000036008 1002 1.797 - - - - - 0.891 - - 0.906 calcyon neuron-specific vesicular protein [Source:ZFIN;Acc:ZDB-GENE-090313-405]
9. st8sia2 ENSDARG00000018788 2183 1.789 - - - - - 0.838 - - 0.951 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-020919-4]
10. thsd7ba ENSDARG00000095022 231 1.781 - - - - - 0.857 - - 0.924 thrombospondin, type I, domain containing 7Ba [Source:ZFIN;Acc:ZDB-GENE-070621-2]
11. JPH3 ENSDARG00000102204 283 1.743 - 0.960 - - - 0.783 - - - junctophilin 3 [Source:ZFIN;Acc:ZDB-GENE-060503-415]
12. cd99l2 ENSDARG00000056722 5036 1.738 - - - - - 0.919 - - 0.819 CD99 molecule-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1986]
13. si:dkey-153k10.9 ENSDARG00000004386, ENSDARG00000109564, ENSDARG00000111507 319 1.737 - - - - - 0.817 - - 0.920 si:dkey-153k10.9 [Source:ZFIN;Acc:ZDB-GENE-030131-3893]
14. nrxn3b ENSDARG00000062693 192 1.736 - - - - - 0.834 - - 0.902 neurexin 3b [Source:ZFIN;Acc:ZDB-GENE-070206-10]
15. ppp1r14c ENSDARG00000077341 1587 1.734 - - - - - 0.887 - - 0.847 protein phosphatase 1, regulatory (inhibitor) subunit 14C [Source:ZFIN;Acc:ZDB-GENE-050706-92]
16. daxx ENSDARG00000000729 734 1.732 - - - - - 0.803 - - 0.929 death-domain associated protein [Source:ZFIN;Acc:ZDB-GENE-010110-3]
17. TDG TDG 1191 1.729 - - - - - 0.797 0.932 - -
18. her15.2 her15.2 1701 1.726 - - - - - 0.895 - - 0.831
19. sc:d0413 sc:d0413 121 1.724 - 0.960 - - - - - 0.764 -
20. ZNF462 ENSDARG00000112909 1132 1.723 - - - - - 0.794 - - 0.929 zinc finger protein 462 [Source:HGNC Symbol;Acc:HGNC:21684]
21. ptpro ENSDARG00000100422, ENSDARG00000110470 1850 1.721 - - - - - 0.851 - - 0.870 protein tyrosine phosphatase, receptor type, O [Source:ZFIN;Acc:ZDB-GENE-070424-54]
22. phc2b_1 ENSDARG00000013224 1316 1.721 - - - - - 0.792 - - 0.929 polyhomeotic homolog 2b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-1113]
23. nadl1.2 695 1.719 - - - - - 0.854 - - 0.865 neural adhesion molecule L1.2, transcript variant X1
24. xpr1 xpr1 840 1.717 - - - - - 0.880 - - 0.837
25. nrn1a ENSDARG00000071860 1311 1.712 - - - - - 0.866 - - 0.846 neuritin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-212]
26. CASK CASK 1750 1.707 - - - - - 0.891 - - 0.816
27. zgc:113348 ENSDARG00000103795 1351 1.702 - - - - - 0.762 - - 0.940 zgc:113348 [Source:ZFIN;Acc:ZDB-GENE-050227-10]
28. mex3b ENSDARG00000058369 1867 1.7 - - - - - 0.795 - - 0.905 mex-3 RNA binding family member B [Source:ZFIN;Acc:ZDB-GENE-030131-2628]
29. znf804a ENSDARG00000027079 121 1.697 - 0.960 - - - - - 0.737 - zinc finger protein 804A [Source:ZFIN;Acc:ZDB-GENE-070912-632]
30. ZNF337_4 ZNF337_4 409 1.695 - - - - - - - 0.772 0.923
31. rimkla ENSDARG00000016830, ENSDARG00000112193 4111 1.695 - - - - - 0.819 - - 0.876 ribosomal modification protein rimK-like family member A [Source:ZFIN;Acc:ZDB-GENE-040912-20]
32. RBM6 ENSDARG00000077060 3521 1.694 - - - - - 0.834 - - 0.860 RNA binding motif protein 6 [Source:ZFIN;Acc:ZDB-GENE-050309-79]
33. cenpk ENSDARG00000039616 744 1.692 - - - - - 0.772 - - 0.920 centromere protein K [Source:ZFIN;Acc:ZDB-GENE-090313-204]
34. stmn2a ENSDARG00000033234 2272 1.684 - - - - - 0.890 - - 0.794 stathmin 2a [Source:ZFIN;Acc:ZDB-GENE-041010-85]
35. gpr157 ENSDARG00000034975, ENSDARG00000115075 61 1.682 - 0.940 - - - 0.742 - - - G protein-coupled receptor 157 [Source:ZFIN;Acc:ZDB-GENE-050809-126]
36. plp1a ENSDARG00000103732 3544 1.676 - - - - - 0.940 - - 0.736 proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
37. phf10 ENSDARG00000070084 1210 1.673 - - - - - 0.738 - - 0.935 PHD finger protein 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1573]
38. gng2_1 ENSDARG00000056831 113 1.668 - 0.940 - - - 0.728 - - - guanine nucleotide binding protein (G protein), gamma 2 [Source:ZFIN;Acc:ZDB-GENE-050417-59]
39. lhx5 ENSDARG00000057936 785 1.668 - - - - - 0.831 - - 0.837 LIM homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-484]
40. SNAP91 ENSDARG00000098809 556 1.667 - - - - - 0.751 - - 0.916 synaptosomal-associated protein 91 [Source:ZFIN;Acc:ZDB-GENE-100422-6]
41. stmn1b ENSDARG00000033655 9491 1.664 - - - - - 0.880 - - 0.784 stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
42. cpsf1 ENSDARG00000034178 2036 1.662 - - - - - 0.767 - - 0.895 cleavage and polyadenylation specific factor 1 [Source:ZFIN;Acc:ZDB-GENE-040709-2]
43. mvb12ba ENSDARG00000091619 18 1.659 - 0.920 - - - - 0.739 - - multivesicular body subunit 12Ba [Source:ZFIN;Acc:ZDB-GENE-060929-372]
44. kifap3b ENSDARG00000006862 613 1.658 - 0.845 - - - 0.813 - - - kinesin-associated protein 3b [Source:ZFIN;Acc:ZDB-GENE-030131-2219]
45. kif18a ENSDARG00000008022 546 1.657 - - - - - 0.771 - - 0.886 kinesin family member 18A [Source:ZFIN;Acc:ZDB-GENE-040426-862]
46. DBF4B ENSDARG00000086550 374 1.656 - - - - - 0.794 - 0.862 - DBF4 zinc finger B [Source:ZFIN;Acc:ZDB-GENE-121214-269]
47. sema6e ENSDARG00000000189 35 1.656 - 0.940 - - 0.716 - - - - sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6E [Source:ZFIN;Acc:ZDB-GENE-040724-119]
48. si:ch211-133l11.10 ENSDARG00000005626 381 1.655 - - - - - 0.747 - - 0.908 si:ch211-133l11.10 [Source:ZFIN;Acc:ZDB-GENE-141219-14]
49. mamdc1 mamdc1 156 1.654 - 0.875 - - - 0.779 - - -
50. dtnbb ENSDARG00000013020 280 1.651 - - - - - 0.849 - 0.802 - dystrobrevin, beta b [Source:ZFIN;Acc:ZDB-GENE-070117-3]
51. klhdc10 ENSDARG00000007764 529 1.644 - - - - - 0.766 - - 0.878 kelch domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-040426-776]
52. tox4 tox4 1671 1.642 - - - - - 0.761 - - 0.881
53. appb ENSDARG00000055543, ENSDARG00000109552 4461 1.641 - - - - - 0.920 - - 0.721 amyloid beta (A4) precursor protein b [Source:ZFIN;Acc:ZDB-GENE-020220-1]
54. sacs ENSDARG00000091042 314 1.64 - - - - - 0.882 - 0.758 - sacsin molecular chaperone [Source:ZFIN;Acc:ZDB-GENE-110411-146]
55. srsf6b ENSDARG00000016783 9926 1.637 - - - - - 0.781 - - 0.856 serine/arginine-rich splicing factor 6b [Source:ZFIN;Acc:ZDB-GENE-041219-1]
56. fastkd1 ENSDARG00000056128 141 1.634 - 0.885 - - - - - 0.749 - FAST kinase domains 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1833]
57. MAN2A2 ENSDARG00000063101 922 1.634 - - - - - 0.724 - - 0.910 mannosidase, alpha, class 2A, member 2 [Source:ZFIN;Acc:ZDB-GENE-110331-1]
58. ZFAT ENSDARG00000077987 205 1.629 - - - - - - - 0.730 0.899 zinc finger and AT hook domain containing [Source:ZFIN;Acc:ZDB-GENE-130204-2]
59. espl1 ENSDARG00000075354 818 1.628 - - - - - 0.811 - - 0.817 extra spindle pole bodies like 1, separase [Source:ZFIN;Acc:ZDB-GENE-030131-5188]
60. pspc1 ENSDARG00000006621 966 1.626 - - - - - 0.731 - - 0.895 paraspeckle component 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9530]
61. myt1b ENSDARG00000102879 5411 1.624 - - - - - 0.885 - - 0.739 myelin transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-090313-67]
62. palm1b ENSDARG00000007818 2128 1.623 - - - - - 0.779 - - 0.844 paralemmin 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1147]
63. gpr27 ENSDARG00000006607 125 1.622 - - - - - 0.858 0.764 - - G protein-coupled receptor 27 [Source:ZFIN;Acc:ZDB-GENE-071022-3]
64. smad3b ENSDARG00000010207 951 1.618 - 0.758 - - - 0.860 - - - SMAD family member 3b [Source:ZFIN;Acc:ZDB-GENE-030128-4]
65. si:dkey-79f11.1 si:dkey-79f11.1 91 1.615 - - - - - 0.819 0.796 - -
66. gpm6ba ENSDARG00000005739, ENSDARG00000110895 1177 1.615 - - - - - 0.757 - - 0.858 glycoprotein M6Ba [Source:ZFIN;Acc:ZDB-GENE-030710-9]
67. hnrnpc ENSDARG00000053810, ENSDARG00000113662 66 1.614 - 0.847 - - - - - 0.767 - heterogeneous nuclear ribonucleoprotein C [Source:ZFIN;Acc:ZDB-GENE-040426-2043]
68. si:ch73-362m14.4 ENSDARG00000023940 88 1.61 - - - - - 0.870 - 0.740 - si:ch73-362m14.4 [Source:ZFIN;Acc:ZDB-GENE-120215-30]
69. cwc25 ENSDARG00000003382 2134 1.606 - - - - - 0.725 - - 0.881 CWC25 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-2817]
70. hug 4100 1.603 - - - - - 0.769 - - 0.834 HuG, transcript variant X2
71. zgc:109889 ENSDARG00000069600, ENSDARG00000113538 554 1.599 - 0.820 - - - 0.779 - - - zgc:109889 [Source:ZFIN;Acc:ZDB-GENE-050522-547]
72. ADAM22 ENSDARG00000060532 2259 1.598 - - - - - 0.878 - - 0.720 ADAM metallopeptidase domain 22 [Source:ZFIN;Acc:ZDB-GENE-070810-1]
73. vezf1a ENSDARG00000008247 1449 1.589 - - - 0.739 - 0.850 - - - vascular endothelial zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-040108-4]
74. bcl11ab ENSDARG00000063153 3032 1.585 - - - 0.729 - 0.856 - - - B cell CLL/lymphoma 11Ab [Source:ZFIN;Acc:ZDB-GENE-061009-4]
75. pcdh18a ENSDARG00000089805 1096 1.582 - - - - - 0.716 - - 0.866 protocadherin 18a [Source:ZFIN;Acc:ZDB-GENE-000607-1]
76. abi2b ENSDARG00000014875 2259 1.574 - - - - - 0.734 - - 0.840 abl-interactor 2b [Source:ZFIN;Acc:ZDB-GENE-060519-5]
77. ctbp1 ENSDARG00000057007, ENSDARG00000115804 5795 1.565 - - - - - 0.818 - - 0.747 C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]
78. ldb2b ENSDARG00000034896, ENSDARG00000113987, ENSDARG00000116485 976 1.563 - 0.769 - - - - - - 0.794 LIM domain binding 2b [Source:ZFIN;Acc:ZDB-GENE-990415-137]
79. fscn1a ENSDARG00000059680 3999 1.558 - - - - - 0.823 - - 0.735 fascin actin-bundling protein 1a [Source:ZFIN;Acc:ZDB-GENE-031009-1]
80. zgc:174275 ENSDARG00000099845 172 1.555 0.824 - - - - - - 0.731 - zgc:174275 [Source:ZFIN;Acc:ZDB-GENE-080305-5]
81. cadm4 ENSDARG00000040291 2284 1.554 - - - - - 0.796 - - 0.758 cell adhesion molecule 4 [Source:ZFIN;Acc:ZDB-GENE-041114-138]
82. iqca1 ENSDARG00000057276, ENSDARG00000113642 161 1.552 - 0.813 - - - - 0.739 - - IQ motif containing with AAA domain 1 [Source:ZFIN;Acc:ZDB-GENE-050208-768]
83. pax3a ENSDARG00000010192 626 1.552 - 0.722 - - - 0.830 - - - paired box 3a [Source:ZFIN;Acc:ZDB-GENE-980526-52]
84. sost ENSDARG00000061259 216 1.539 - 0.784 - - - - 0.755 - - sclerostin [Source:ZFIN;Acc:ZDB-GENE-110411-139]
85. her4.1 ENSDARG00000056732 1264 1.538 - - - - - 0.763 - - 0.775 hairy-related 4, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-980526-521]
86. slc1a2b ENSDARG00000102453 3136 1.537 - - - - - 0.763 - - 0.774 solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
87. b4galt6 ENSDARG00000010301 2005 1.535 - - - - - 0.705 - - 0.830 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6 [Source:ZFIN;Acc:ZDB-GENE-040426-789]
88. GRAMD2 GRAMD2 300 1.532 - 0.810 - - - 0.722 - - -
89. irx1b ENSDARG00000056594 2224 1.525 - - - - - 0.737 - - 0.788 iroquois homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-010716-1]
90. TNRC6B ENSDARG00000074161 2464 1.522 - - - - - 0.725 - - 0.797 trinucleotide repeat containing 6b [Source:ZFIN;Acc:ZDB-GENE-030131-13]
91. KLHL14 ENSDARG00000045275 155 1.518 - - - - - 0.749 - 0.769 - kelch-like family member 14 [Source:ZFIN;Acc:ZDB-GENE-091204-223]
92. shisa7 shisa7 181 1.511 - - - - - 0.754 - 0.757 -
93. bend3 ENSDARG00000076903 320 1.511 - 0.743 - - - 0.768 - - - BEN domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-090312-181]
94. stmn2b ENSDARG00000070537 1586 1.504 - - - - - 0.790 0.714 - - stathmin 2b [Source:ZFIN;Acc:ZDB-GENE-050522-207]
95. npas3b npas3b 1446 1.495 - - - - - 0.726 - - 0.769
96. nova2 ENSDARG00000017673 7685 1.493 - - - - - 0.790 - - 0.703 neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
97. ebf3 ebf3 4238 1.49 - - 0.726 - - - - - 0.764
98. msi1 ENSDARG00000010710 2634 1.488 - - - - - 0.749 - - 0.739 musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
99. slc29a1a ENSDARG00000101289 2074 1.483 - - - - - 0.733 - - 0.750 solute carrier family 29 (equilibrative nucleoside transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-050913-138]
100. uhrf1 ENSDARG00000103409 3282 1.462 - - - - - 0.716 - - 0.746 ubiquitin-like with PHD and ring finger domains 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2039]

There are 1946 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA