Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for pdlim3a

Gene Name Gene ID Reads Annotation
pdlim3a ENSDARG00000011023, ENSDARG00000115861 3 PDZ and LIM domain 3a [Source:ZFIN;Acc:ZDB-GENE-050505-1]










Genes with expression patterns similar to pdlim3a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pdlim3a ENSDARG00000011023, ENSDARG00000115861 3 3 - - 1.000 1.000 1.000 - - - - PDZ and LIM domain 3a [Source:ZFIN;Acc:ZDB-GENE-050505-1]
2. CR352256.1 CR352256.1 3 1 - - 1.000 - - - - - -
3. zmiz2 ENSDARG00000098683 1 1 - - 1.000 - - - - - - zinc finger, MIZ-type containing 2 [Source:ZFIN;Acc:ZDB-GENE-090313-285]
4. BX465203.1 ENSDARG00000113985 8 1 - - - - 1.000 - - - -
5. si:dkeyp-104f11.4 si:dkeyp-104f11.4 40 1 - - 1.000 - - - - - -
6. phc2b ENSDARG00000013224 3 1 - - 1.000 - - - - - - polyhomeotic homolog 2b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-1113]
7. ren ENSDARG00000041858 0 1 - - 1.000 - - - - - - renin [Source:ZFIN;Acc:ZDB-GENE-040630-3]
8. p2rx1 ENSDARG00000016695, ENSDARG00000110431 9 1 - - - - 1.000 - - - - purinergic receptor P2X, ligand-gated ion channel, 1 [Source:ZFIN;Acc:ZDB-GENE-030319-1]
9. col5a3b ENSDARG00000101816 56 1 - - - 1.000 - - - - - collagen, type V, alpha 3b [Source:ZFIN;Acc:ZDB-GENE-110728-4]
10. DOCK1_1 DOCK1_1 2 1 - - - - 1.000 - - - -
11. CCBL2 0 1 - - 1.000 - - - - - - cysteine conjugate-beta lyase 2, transcript variant X4
12. zgc:112966 ENSDARG00000095369, ENSDARG00000099057, ENSDARG00000101612 7 1 - - - - 1.000 - - - - zgc:112966 [Source:ZFIN;Acc:ZDB-GENE-050320-137]
13. vtg2 ENSDARG00000055809, ENSDARG00000111529, ENSDARG00000114568 3 1 - - - 1.000 - - - - - vitellogenin 2 [Source:ZFIN;Acc:ZDB-GENE-001201-2]
14. KCNMB3 KCNMB3 5 1 - - 1.000 - - - - - -
15. ECM1_1 ECM1_1 4 1 - - 1.000 - - - - - -
16. si:dkey-115f9.3 7 1 - - 1.000 - - - - - - si:dkey-115f9.3, transcript variant X2
17. CR388163.1 ENSDARG00000096928 5 1 - - - - 1.000 - - - -
18. CR759882.1 ENSDARG00000097207 0 1 - - 1.000 - - - - - -
19. camta2 ENSDARG00000092799 5 1 - - 1.000 - - - - - - calmodulin binding transcription activator 2 [Source:ZFIN;Acc:ZDB-GENE-090313-6]
20. CACNA1H CACNA1H 34 1 - - 1.000 - - - - - -
21. si:ch211-151h10.2 ENSDARG00000068250 14 1 - - - 1.000 - - - - - si:ch211-151h10.2 [Source:ZFIN;Acc:ZDB-GENE-050419-29]
22. abcc9 ENSDARG00000015985 20 1 - - 1.000 - - - - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 9 [Source:ZFIN;Acc:ZDB-GENE-050517-23]
23. si:dkey-11f7.4 si:dkey-11f7.4 1 1 - - 1.000 - - - - - -
24. CABZ01044346.1 CABZ01044346.1 12 1 - - - 1.000 - - - - -
25. cx39.4 ENSDARG00000070357 17 1 - - - 1.000 - - - - - connexin 39.4 [Source:ZFIN;Acc:ZDB-GENE-050616-6]
26. zgc:112242 11 1 - - - 1.000 - - - - - zgc:112242
27. pigf ENSDARG00000032780 7 1 - - 1.000 - - - - - - phosphatidylinositol glycan anchor biosynthesis, class F [Source:ZFIN;Acc:ZDB-GENE-040426-1801]
28. cacna2d2 cacna2d2 16 1 - - - 1.000 - - - - -
29. zgc:171750 ENSDARG00000078638 4 1 - - 1.000 - - - - - - zgc:171750 [Source:ZFIN;Acc:ZDB-GENE-071004-30]
30. si:dkey-178e17.1 ENSDARG00000080000 4 1 - - 1.000 - - - - - - si:dkey-178e17.1 [Source:ZFIN;Acc:ZDB-GENE-081104-41]
31. nmbr ENSDARG00000054152 0 1 - - 1.000 - - - - - - neuromedin B receptor [Source:ZFIN;Acc:ZDB-GENE-041014-369]
32. CU856520.1 ENSDARG00000098941 2 1 - - 1.000 - - - - - -
33. zgc:175135 ENSDARG00000077741, ENSDARG00000079534, ENSDARG00000105499 0 1 - - 1.000 - - - - - - zgc:175135 [Source:ZFIN;Acc:ZDB-GENE-080214-1]
34. palmda ENSDARG00000001913 26 1 - - - 1.000 - - - - - palmdelphin a [Source:ZFIN;Acc:ZDB-GENE-070705-48]
35. camkvl ENSDARG00000057000 40 1 - - 1.000 - - - - - - CaM kinase-like vesicle-associated, like [Source:ZFIN;Acc:ZDB-GENE-090311-58]
36. slco1f3 ENSDARG00000105691 6 1 - - - - 1.000 - - - - solute carrier organic anion transporter family, member 1F3 [Source:ZFIN;Acc:ZDB-GENE-080212-5]
37. CABZ01081656.1 CABZ01081656.1 14 1 - - 1.000 - - - - - -
38. si:ch211-76l23.6 si:ch211-76l23.6 68 1 - - - 1.000 - - - - -
39. si:ch211-207e19.16 si:ch211-207e19.16 3 1 - - - 1.000 - - - - -
40. crygm2e ENSDARG00000044875 1 1 - - 1.000 - - - - - - crystallin, gamma M2e [Source:ZFIN;Acc:ZDB-GENE-081105-116]
41. C24H16orf11 C24H16orf11 32 1 - - 1.000 - - - - - -
42. ydjc ENSDARG00000062655 5 1 - - 1.000 - - - - - - YdjC chitooligosaccharide deacetylase homolog [Source:ZFIN;Acc:ZDB-GENE-060526-182]
43. si:dkey-26i24.2 si:dkey-26i24.2 3 1 - - 1.000 - - - - - -
44. si:dkey-233h12.3 si:dkey-233h12.3 4 1 - - 1.000 - - - - - -
45. tmem8c 10 1 - - - - 1.000 - - - - transmembrane protein 8C, transcript variant X1
46. si:dkey-163m14.6 5 1 - - 1.000 - - - - - - si:dkey-163m14.6
47. si:dkey-54j5.1 si:dkey-54j5.1 4 1 - - - - 1.000 - - - -
48. lsm10 5 1 - - - 1.000 - - - - - LSM10, U7 small nuclear RNA associated
49. si:ch211-113a14.26 5 1 - - - - 1.000 - - - - si:ch211-113a14.26
50. flt3 ENSDARG00000058503 32 1 - - 1.000 - - - - - - fms-related tyrosine kinase 3 [Source:ZFIN;Acc:ZDB-GENE-050114-4]
51. prpf4 ENSDARG00000067639, ENSDARG00000114457, ENSDARG00000114653 10 1 - - - 1.000 - - - - - PRP4 pre-mRNA processing factor 4 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-5143]
52. gabbr1a ENSDARG00000018967 2 1 - - 1.000 - - - - - - gamma-aminobutyric acid (GABA) B receptor, 1a [Source:ZFIN;Acc:ZDB-GENE-030904-5]
53. Metazoa_SRP_19 Metazoa_SRP_19 17 1 - - 1.000 - - - - - -
54. CABZ01083473.1 CABZ01083473.1 0 1 - - 1.000 - - - - - -
55. CR388413.1 ENSDARG00000100537 1 1 - - 1.000 - - - - - -
56. tyro3 ENSDARG00000005356 4 1 - - - 1.000 - - - - - TYRO3 protein tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-990714-13]
57. si:dkey-58f10.13 ENSDARG00000095532 11 1 - - 1.000 - - - - - - si:dkey-58f10.13 [Source:ZFIN;Acc:ZDB-GENE-060526-315]
58. si:ch211-207c6.6 si:ch211-207c6.6 32 1 - - 1.000 - - - - - -
59. irf3 ENSDARG00000076251 8 1 - - 1.000 - - - - - - interferon regulatory factor 3 [Source:ZFIN;Acc:ZDB-GENE-071120-7]
60. crhb ENSDARG00000027657 9 1 - - 1.000 - - - - - - corticotropin releasing hormone b [Source:ZFIN;Acc:ZDB-GENE-041114-75]
61. NPTN NPTN 3 1 - - 1.000 - - - - - -
62. si:dkey-29n19.3 si:dkey-29n19.3 0 1 - - 1.000 - - - - - -
63. BX571823.5 BX571823.5 4 1 - - - 1.000 - - - - -
64. or111-11 ENSDARG00000041019 5 1 - - 1.000 - - - - - - odorant receptor, family D, subfamily 111, member 11 [Source:ZFIN;Acc:ZDB-GENE-010308-10]
65. GPC5 GPC5 11 1 - - - 1.000 - - - - -
66. CU464087.1 ENSDARG00000105588 2 1 - - - - 1.000 - - - -
67. BX323876.2 ENSDARG00000104577 62 1 - - 1.000 - - - - - -
68. CU855880.2 CU855880.2 3 1 - - 1.000 - - - - - -
69. iqsec3a ENSDARG00000099850, ENSDARG00000116182 12 1 - - 1.000 - - - - - - IQ motif and Sec7 domain 3a [Source:ZFIN;Acc:ZDB-GENE-041210-343]
70. CABZ01075242.1 ENSDARG00000114227 9 1 - - 1.000 - - - - - -
71. PCBP3 ENSDARG00000054378 17 1 - - - 1.000 - - - - - poly(rC) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-050522-157]
72. ATP13A5 ATP13A5 13 1 - - - 1.000 - - - - -
73. SLC26A3 SLC26A3 8 1 - - 1.000 - - - - - -
74. or112-1 ENSDARG00000077211 2 1 - - 1.000 - - - - - - odorant receptor, family A, subfamily 112, member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-195]
75. slc5a9 ENSDARG00000005518 16 1 - - 1.000 - - - - - - solute carrier family 5 (sodium/sugar cotransporter), member 9 [Source:ZFIN;Acc:ZDB-GENE-080513-3]
76. inpp5k inpp5k 2 1 - - 1.000 - - - - - -
77. CUZD1_3 CUZD1_3 9 1 - - 1.000 - - - - - -
78. SLC5A10 ENSDARG00000074212 11 1 - - 1.000 - - - - - - solute carrier family 5 member 10 [Source:HGNC Symbol;Acc:HGNC:23155]
79. hsp70l_1 ENSDARG00000055723 72 0.99 - - - - 0.990 - - - - heat shock cognate 70-kd protein, like [Source:ZFIN;Acc:ZDB-GENE-050321-1]
80. NAGS ENSDARG00000077193 8 0.984 - - 0.984 - - - - - - N-acetylglutamate synthase [Source:ZFIN;Acc:ZDB-GENE-121219-2]
81. abhd2b ENSDARG00000045804, ENSDARG00000115068 23 0.979 - - 0.979 - - - - - - abhydrolase domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-061027-74]
82. si:dkeyp-66a7.1 si:dkeyp-66a7.1 6 0.979 - - - 0.979 - - - - -
83. si:ch73-95a24.1 si:ch73-95a24.1 11 0.979 - - - 0.979 - - - - -
84. FAM83F FAM83F 8 0.974 - - 0.974 - - - - - -
85. exosc4 ENSDARG00000103432 21 0.971 - - - - 0.971 - - - - exosome component 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1702]
86. ndufv3_1 ENSDARG00000090389 25 0.971 - - - - 0.971 - - - - NADH:ubiquinone oxidoreductase subunit V3 [Source:ZFIN;Acc:ZDB-GENE-030131-6500]
87. rnf150a_1 ENSDARG00000024827 12 0.966 - - - - 0.966 - - - - ring finger protein 150a [Source:ZFIN;Acc:ZDB-GENE-060213-1]
88. KCNS1 KCNS1 24 0.965 - - - 0.965 - - - - -
89. CR356223.6 CR356223.6 4 0.961 - - - 0.961 - - - - -
90. tacr2 ENSDARG00000074509, ENSDARG00000109849, ENSDARG00000112566 4 0.961 - - - 0.961 - - - - - tachykinin receptor 2 [Source:ZFIN;Acc:ZDB-GENE-090312-188]
91. dzank1 ENSDARG00000055787, ENSDARG00000111473 26 0.956 - - - 0.956 - - - - - double zinc ribbon and ankyrin repeat domains 1 [Source:ZFIN;Acc:ZDB-GENE-051113-296]
92. rbp1b rbp1b 36 0.956 - - - - 0.956 - - - -
93. gcgb ENSDARG00000040907 182 0.955 - - 0.955 - - - - - - glucagon b [Source:ZFIN;Acc:ZDB-GENE-040712-2]
94. grn1 ENSDARG00000089362 20 0.955 - - 0.955 - - - - - - granulin 1 [Source:ZFIN;Acc:ZDB-GENE-060103-1]
95. pde8a ENSDARG00000087941 11 0.955 - - 0.955 - - - - - - phosphodiesterase 8A [Source:ZFIN;Acc:ZDB-GENE-070112-622]
96. si:dkey-43f9.1 si:dkey-43f9.1 7 0.955 - - - - 0.955 - - - -
97. gfi1aa ENSDARG00000020746 30 0.952 - - - - 0.952 - - - - growth factor independent 1A transcription repressor a [Source:ZFIN;Acc:ZDB-GENE-050522-534]
98. oard1 ENSDARG00000057426, ENSDARG00000110693 42 0.948 - - 0.948 - - - - - - O-acyl-ADP-ribose deacylase 1 [Source:ZFIN;Acc:ZDB-GENE-050522-480]
99. bhik bhik 23 0.945 - - - - 0.945 - - - -
100. CABZ01061146.1 CABZ01061146.1 28 0.941 - - - 0.941 - - - - -

There are 139 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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