Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for pdlim1

Gene Name Gene ID Reads Annotation
pdlim1 ENSDARG00000019845 5765 PDZ and LIM domain 1 (elfin) [Source:ZFIN;Acc:ZDB-GENE-030131-5227]










Genes with expression patterns similar to pdlim1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pdlim1 ENSDARG00000019845 5765 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 PDZ and LIM domain 1 (elfin) [Source:ZFIN;Acc:ZDB-GENE-030131-5227]
2. slc35f6 ENSDARG00000016745, ENSDARG00000114790 3823 3.209 0.844 0.765 - - - 0.713 0.887 - - solute carrier family 35, member F6 [Source:ZFIN;Acc:ZDB-GENE-040718-297]
3. rer1 ENSDARG00000012747 6939 3.191 0.714 - - - 0.964 0.723 0.790 - - retention in endoplasmic reticulum sorting receptor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1494]
4. tagln2 ENSDARG00000033466, ENSDARG00000110753 7636 3.174 0.775 0.777 - - - 0.755 0.867 - - transgelin 2 [Source:ZFIN;Acc:ZDB-GENE-020802-2]
5. C7H20orf27 C7H20orf27 1864 3.072 - 0.709 0.847 - - 0.754 0.762 - -
6. CABZ01092303.1 CABZ01092303.1 8825 3.034 0.748 - - - 0.877 0.702 0.707 - -
7. spcs1 ENSDARG00000059298 5327 2.554 - 0.858 - - 0.973 - 0.723 - - signal peptidase complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-050809-130]
8. lamp2 ENSDARG00000014914 5035 2.553 - - - - - 0.864 0.927 - 0.762 lysosomal-associated membrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-030729-9]
9. CABZ01013938.1 CABZ01013938.1 4497 2.533 - 0.818 - - 0.933 - 0.782 - -
10. fbxw11b ENSDARG00000017230, ENSDARG00000112841 2593 2.531 - - 0.840 - 0.979 - 0.712 - - F-box and WD repeat domain containing 11b [Source:ZFIN;Acc:ZDB-GENE-040426-2903]
11. arcn1b ENSDARG00000031214 4529 2.467 0.723 - - - 0.973 - 0.771 - - archain 1b [Source:ZFIN;Acc:ZDB-GENE-040121-7]
12. sid4 sid4 1358 2.465 - 0.908 - - - 0.773 0.784 - -
13. gpm6ab ENSDARG00000004621 5825 2.458 - 0.712 - - 0.970 - 0.776 - - glycoprotein M6Ab [Source:ZFIN;Acc:ZDB-GENE-030710-8]
14. atp6v0ca ENSDARG00000057853 23277 2.424 0.739 - - - - 0.790 0.895 - - ATPase H+ transporting V0 subunit ca [Source:ZFIN;Acc:ZDB-GENE-020419-23]
15. SVIL SVIL 2589 2.416 - - 0.854 - - 0.813 0.749 - -
16. SLC22A23 ENSDARG00000078856 2921 2.412 - 0.766 - - - 0.760 0.886 - - solute carrier family 22, member 23 [Source:ZFIN;Acc:ZDB-GENE-030131-3564]
17. zgc:162193 ENSDARG00000098171, ENSDARG00000116836 1773 2.404 - - 0.855 - - - 0.733 0.816 - zgc:162193 [Source:ZFIN;Acc:ZDB-GENE-030131-2035]
18. wls ENSDARG00000009534 8719 2.403 - - - - 0.822 0.776 0.805 - - wntless Wnt ligand secretion mediator [Source:ZFIN;Acc:ZDB-GENE-040426-2161]
19. ptger4b ENSDARG00000035415, ENSDARG00000109430 970 2.398 - - 0.856 - - 0.785 0.757 - - prostaglandin E receptor 4 (subtype EP4) b [Source:ZFIN;Acc:ZDB-GENE-060531-102]
20. vasp vasp 3925 2.395 - - - - - 0.757 0.868 - 0.770
21. myh9a ENSDARG00000063295 27935 2.385 - 0.706 - - - - 0.949 - 0.730 myosin, heavy chain 9a, non-muscle [Source:ZFIN;Acc:ZDB-GENE-030131-5870]
22. ppp1r13l ENSDARG00000013777 2260 2.375 - 0.810 - - - 0.802 0.763 - - protein phosphatase 1, regulatory subunit 13 like [Source:ZFIN;Acc:ZDB-GENE-050327-33]
23. mvp ENSDARG00000021242 6875 2.373 0.784 - 0.748 - - - 0.841 - - major vault protein [Source:ZFIN;Acc:ZDB-GENE-030826-33]
24. sec61b ENSDARG00000076568 11859 2.36 - - - - - 0.743 0.794 - 0.823 Sec61 translocon beta subunit [Source:ZFIN;Acc:ZDB-GENE-040718-260]
25. nme3 ENSDARG00000100990 3889 2.349 0.769 - 0.836 - - - 0.744 - - NME/NM23 nucleoside diphosphate kinase 3 [Source:ZFIN;Acc:ZDB-GENE-000210-34]
26. slc26a5 ENSDARG00000022424 976 2.34 0.709 - - - - 0.741 0.890 - - solute carrier family 26 (anion exchanger), member 5 [Source:ZFIN;Acc:ZDB-GENE-030131-1566]
27. ndfip1 ENSDARG00000013979, ENSDARG00000111470, ENSDARG00000112351 2550 2.337 - 0.761 - - - 0.723 0.853 - - Nedd4 family interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2767]
28. tbca ENSDARG00000016754 6427 2.324 0.747 - - - - 0.711 0.866 - - tubulin cofactor a [Source:ZFIN;Acc:ZDB-GENE-040426-962]
29. lama5 ENSDARG00000058543 2782 2.299 - 0.792 - - - 0.728 0.779 - - laminin, alpha 5 [Source:ZFIN;Acc:ZDB-GENE-030131-9823]
30. pfn1 ENSDARG00000088091 71242 2.296 0.714 - - - - - 0.840 - 0.742 profilin 1 [Source:ZFIN;Acc:ZDB-GENE-031002-33]
31. ppifb ENSDARG00000052842 3533 2.261 0.740 - 0.821 - - 0.700 - - - peptidylprolyl isomerase Fb [Source:ZFIN;Acc:ZDB-GENE-051030-126]
32. fermt1 ENSDARG00000052652 2394 2.253 0.784 0.735 - - - 0.734 - - - fermitin family member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3264]
33. soul2 ENSDARG00000039499 1469 2.211 0.712 - - - - 0.786 0.713 - - heme-binding protein soul2 [Source:ZFIN;Acc:ZDB-GENE-030131-2524]
34. furina ENSDARG00000062909, ENSDARG00000117158 6313 1.834 - - - - - 0.926 0.908 - - furin (paired basic amino acid cleaving enzyme) a [Source:ZFIN;Acc:ZDB-GENE-040901-1]
35. mrpl11 ENSDARG00000013075 2927 1.822 - - 0.843 - 0.979 - - - - mitochondrial ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040718-294]
36. gnmt ENSDARG00000006840 2422 1.819 - - - - - 0.914 0.905 - - glycine N-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-040227-1]
37. gm2a ENSDARG00000088439 5387 1.8 0.906 - - - - - 0.894 - - GM2 ganglioside activator [Source:ZFIN;Acc:ZDB-GENE-050417-373]
38. pls3 ENSDARG00000037655 5175 1.782 - - - - - - 0.918 - 0.864 plastin 3 (T isoform) [Source:ZFIN;Acc:ZDB-GENE-040718-10]
39. arf6b ENSDARG00000052928 4585 1.773 - 0.797 - - 0.976 - - - - ADP-ribosylation factor 6b [Source:ZFIN;Acc:ZDB-GENE-030131-9056]
40. znf207a ENSDARG00000015538 2630 1.765 - - 0.822 - 0.943 - - - - zinc finger protein 207, a [Source:ZFIN;Acc:ZDB-GENE-040426-2273]
41. vtnb ENSDARG00000053831 2364 1.761 - 0.838 - - - - 0.923 - - vitronectin b [Source:ZFIN;Acc:ZDB-GENE-041116-1]
42. pitx2 ENSDARG00000036194 2279 1.759 - - - - 0.971 - 0.788 - - paired-like homeodomain 2 [Source:ZFIN;Acc:ZDB-GENE-990714-27]
43. pak4 ENSDARG00000018110 1962 1.74 - - 0.909 - - 0.831 - - - p21 protein (Cdc42/Rac)-activated kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040704-69]
44. g6pca.1 ENSDARG00000031616 401 1.737 - - 0.855 - - - 0.882 - - glucose-6-phosphatase a, catalytic subunit, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-031001-4]
45. sf3b3_1 ENSDARG00000103553 1191 1.733 - 0.755 - - 0.978 - - - - splicing factor 3b, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2901]
46. USP24 ENSDARG00000059925 1294 1.732 - - - - 0.983 0.749 - - - ubiquitin specific peptidase 24 [Source:ZFIN;Acc:ZDB-GENE-030131-4356]
47. acsl4a ENSDARG00000004078 4241 1.726 - 0.823 - - - - 0.903 - - acyl-CoA synthetase long chain family member 4a [Source:ZFIN;Acc:ZDB-GENE-040426-1565]
48. btbd10b ENSDARG00000020252 7251 1.725 - - - - - 0.867 0.858 - - BTB (POZ) domain containing 10b [Source:ZFIN;Acc:ZDB-GENE-080104-5]
49. ttc13 ENSDARG00000063242 1360 1.724 - - - - 0.979 - 0.745 - - tetratricopeptide repeat domain 13 [Source:ZFIN;Acc:ZDB-GENE-080722-25]
50. atic ENSDARG00000016706 6032 1.723 - 0.772 - - - - 0.951 - - 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase [Source:ZFIN;Acc:ZDB-GENE-011212-4]
51. gmfb ENSDARG00000028327 6522 1.721 - - - - - 0.854 0.867 - - glia maturation factor, beta [Source:ZFIN;Acc:ZDB-GENE-040426-2114]
52. rcan1a ENSDARG00000003109, ENSDARG00000112478 3319 1.72 - - - - 0.974 - 0.746 - - regulator of calcineurin 1a [Source:ZFIN;Acc:ZDB-GENE-040801-135]
53. sult2st1_1 ENSDARG00000033170 3074 1.719 - - - - - 0.841 0.878 - - sulfotransferase family 2, cytosolic sulfotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030219-114]
54. gpd1b ENSDARG00000043180 6002 1.717 - 0.834 - - - - 0.883 - - glycerol-3-phosphate dehydrogenase 1b [Source:ZFIN;Acc:ZDB-GENE-030131-3906]
55. rab5c ENSDARG00000026712 4733 1.71 - - 0.846 - - - 0.864 - - RAB5C, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-031118-30]
56. cldne ENSDARG00000043128 6960 1.706 - - - - - - 0.882 - 0.824 claudin e [Source:ZFIN;Acc:ZDB-GENE-010328-5]
57. tfg ENSDARG00000003641, ENSDARG00000115188 3834 1.705 - 0.873 - - - - 0.832 - - trk-fused gene [Source:ZFIN;Acc:ZDB-GENE-030131-8410]
58. sec31a ENSDARG00000021082, ENSDARG00000111434, ENSDARG00000114514 6991 1.704 - - - - 0.947 0.757 - - - SEC31 homolog A, COPII coat complex component [Source:ZFIN;Acc:ZDB-GENE-020919-2]
59. naga ENSDARG00000099313 2483 1.704 - - - - - 0.848 0.856 - - N-acetylgalactosaminidase, alpha [Source:ZFIN;Acc:ZDB-GENE-051113-256]
60. aldh9a1a.1 ENSDARG00000069100, ENSDARG00000114905 30071 1.702 - - - - 0.898 - 0.804 - - aldehyde dehydrogenase 9 family, member A1a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1257]
61. rhoae rhoae 4047 1.699 0.791 - - - - - 0.908 - -
62. bnip4 ENSDARG00000022832, ENSDARG00000117207 3100 1.699 - - - - 0.974 - 0.725 - - BCL2 interacting protein 4 [Source:ZFIN;Acc:ZDB-GENE-051113-212]
63. GPA33 2465 1.691 - 0.927 - - - - 0.764 - - glycoprotein A33 (transmembrane)
64. efnb3b ENSDARG00000042277 5823 1.688 - - 0.772 - 0.916 - - - - ephrin-B3b [Source:ZFIN;Acc:ZDB-GENE-010618-3]
65. glud1a ENSDARG00000008816, ENSDARG00000114252 3468 1.688 - - - - 0.986 0.702 - - - glutamate dehydrogenase 1a [Source:ZFIN;Acc:ZDB-GENE-030114-2]
66. cst3 ENSDARG00000007795 13753 1.687 - - - - - 0.766 0.921 - - cystatin C (amyloid angiopathy and cerebral hemorrhage) [Source:ZFIN;Acc:ZDB-GENE-030131-373]
67. pqlc2 ENSDARG00000043624 1056 1.687 - 0.904 - - - 0.783 - - - PQ loop repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-050306-4]
68. f10 ENSDARG00000088581 4968 1.686 - - - - - 0.745 0.941 - - coagulation factor X [Source:ZFIN;Acc:ZDB-GENE-021206-9]
69. rxraa ENSDARG00000057737 750 1.682 - - 0.849 - - 0.833 - - - retinoid X receptor, alpha a [Source:ZFIN;Acc:ZDB-GENE-070314-2]
70. gart ENSDARG00000101089 6062 1.682 0.748 - - - 0.934 - - - - phosphoribosylglycinamide formyltransferase [Source:ZFIN;Acc:ZDB-GENE-000616-14]
71. CU633744.1 CU633744.1 2074 1.68 - 0.778 - - - - 0.902 - -
72. zgc:158309 zgc:158309 2696 1.679 - - - - - 0.850 0.829 - -
73. MPC2 ENSDARG00000024478 4194 1.677 0.778 - - - - - 0.899 - - mitochondrial pyruvate carrier 2 [Source:ZFIN;Acc:ZDB-GENE-030131-330]
74. suclg2 ENSDARG00000044914 7950 1.674 - - - - - 0.760 0.914 - - succinate-CoA ligase, GDP-forming, beta subunit [Source:ZFIN;Acc:ZDB-GENE-030114-3]
75. epas1a ENSDARG00000008697 3225 1.674 - - 0.824 - - - 0.850 - - endothelial PAS domain protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4490]
76. neu1 ENSDARG00000008832 2848 1.667 - 0.771 - - - - 0.896 - - neuraminidase 1 [Source:ZFIN;Acc:ZDB-GENE-060503-592]
77. ube2a ENSDARG00000098466 12765 1.665 - - 0.758 - 0.907 - - - - ubiquitin-conjugating enzyme E2A (RAD6 homolog) [Source:ZFIN;Acc:ZDB-GENE-030616-72]
78. SLC13A4 ENSDARG00000059053 2114 1.664 0.774 - - - - - 0.890 - - solute carrier family 13 (sodium/sulfate symporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-070424-71]
79. ctsh ENSDARG00000041108 2873 1.663 - - - - - 0.758 0.905 - - cathepsin H [Source:ZFIN;Acc:ZDB-GENE-030131-3539]
80. fam32al fam32al 5716 1.663 - 0.716 - - 0.947 - - - -
81. SH3D21 ENSDARG00000099448 1726 1.659 0.800 - - - - - 0.859 - - SH3 domain containing 21 [Source:ZFIN;Acc:ZDB-GENE-051120-57]
82. GCA GCA 5211 1.655 - - - - - - 0.773 - 0.882
83. sptbn2 ENSDARG00000053956 8452 1.654 - - 0.811 - - 0.843 - - - spectrin, beta, non-erythrocytic 2 [Source:ZFIN;Acc:ZDB-GENE-030131-787]
84. CABZ01007794.1 CABZ01007794.1 14290 1.654 - 0.883 - - - - 0.771 - -
85. vta1 ENSDARG00000013732 6072 1.651 - - 0.859 - - - 0.792 - - vesicle (multivesicular body) trafficking 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2154]
86. zgc:152830 ENSDARG00000079932 12194 1.65 - - - - - 0.743 0.907 - - zgc:152830 [Source:ZFIN;Acc:ZDB-GENE-090312-55]
87. mthfd1b ENSDARG00000040492 3784 1.649 - - - - - 0.767 0.882 - - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1b [Source:ZFIN;Acc:ZDB-GENE-020905-4]
88. cldnb ENSDARG00000009544 6036 1.649 0.753 - - - - - 0.896 - - claudin b [Source:ZFIN;Acc:ZDB-GENE-010328-2]
89. zgc:92066 ENSDARG00000031776, ENSDARG00000116586 12826 1.648 - - - - 0.818 - - - 0.830 zgc:92066 [Source:ZFIN;Acc:ZDB-GENE-040718-72]
90. itm2bb ENSDARG00000041505 2734 1.647 - - - - - 0.792 0.855 - - integral membrane protein 2Bb [Source:ZFIN;Acc:ZDB-GENE-040426-2139]
91. efhd2 ENSDARG00000055759 7777 1.644 - 0.868 - - - 0.776 - - - EF-hand domain family, member D2 [Source:ZFIN;Acc:ZDB-GENE-060531-152]
92. rrm2b ENSDARG00000033367, ENSDARG00000115899 2754 1.643 0.818 - - - - - 0.825 - - ribonucleotide reductase M2 b [Source:ZFIN;Acc:ZDB-GENE-030616-614]
93. rnf183 ENSDARG00000068851 2427 1.642 - - 0.854 - - - 0.788 - - ring finger protein 183 [Source:ZFIN;Acc:ZDB-GENE-060929-1090]
94. coro1ca ENSDARG00000035598 9278 1.64 0.836 - - - - - 0.804 - - coronin, actin binding protein, 1Ca [Source:ZFIN;Acc:ZDB-GENE-030114-6]
95. bcl2l1 ENSDARG00000008434 1956 1.639 0.767 - - - - - 0.872 - - bcl2-like 1 [Source:ZFIN;Acc:ZDB-GENE-010730-1]
96. sec23b ENSDARG00000019360 6210 1.638 0.763 - - - - - 0.875 - - Sec23 homolog B, COPII coat complex component [Source:ZFIN;Acc:ZDB-GENE-030131-5479]
97. tmed4 ENSDARG00000024954 3476 1.637 - - 0.839 - - - - - 0.798 transmembrane p24 trafficking protein 4 [Source:ZFIN;Acc:ZDB-GENE-040625-140]
98. pdap1a ENSDARG00000092546, ENSDARG00000116115 7617 1.637 - - - - 0.936 0.701 - - - pdgfa associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1693]
99. si:ch73-18b11.1 si:ch73-18b11.1 3840 1.635 - 0.830 0.805 - - - - - -
100. COLGALT1 ENSDARG00000073974 5069 1.633 - - 0.920 - - - 0.713 - - collagen beta(1-O)galactosyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-070720-6]

There are 1548 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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