Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for pdk3a

Gene Name Gene ID Reads Annotation
pdk3a ENSDARG00000014527 15 pyruvate dehydrogenase kinase, isozyme 3a [Source:ZFIN;Acc:ZDB-GENE-061220-3]










Genes with expression patterns similar to pdk3a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pdk3a ENSDARG00000014527 15 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 pyruvate dehydrogenase kinase, isozyme 3a [Source:ZFIN;Acc:ZDB-GENE-061220-3]
2. si:busm1-228j01.5 si:busm1-228j01.5 9 2.523 - 0.905 - - - 0.833 0.785 - -
3. zgc:112234_5 ENSDARG00000099514, ENSDARG00000102806, ENSDARG00000104588, ENSDARG00000105340, ENSDARG00000105393, ENSDARG00000105414, ENSDARG00000105468, ENSDARG00000105483, ENSDARG00000105507, ENSDARG00000111934 6 1.983 - - 0.983 1.000 - - - - - zgc:112234 [Source:NCBI gene;Acc:554097]
4. si:dkey-167i21.4 si:dkey-167i21.4 12 1.94 - - 0.940 - - - - - 1.000
5. CABZ01074899.1 CABZ01074899.1 89 1.911 - 0.935 - - - 0.976 - - -
6. si:ch211-219a15.3 ENSDARG00000087659 12 1.899 - - - - - 1.000 - - 0.899 si:ch211-219a15.3 [Source:ZFIN;Acc:ZDB-GENE-060503-214]
7. sox11a ENSDARG00000077811 25 1.872 - - 0.872 - - 1.000 - - - SRY (sex determining region Y)-box 11a [Source:ZFIN;Acc:ZDB-GENE-980526-395]
8. CR854827.2 ENSDARG00000097227 15 1.86 - - 0.993 - - 0.867 - - -
9. PLCG2 ENSDARG00000068763 11 1.848 - 0.905 - - - 0.943 - - - phospholipase C, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9532]
10. RBM33_1 RBM33_1 7 1.837 - - - 0.893 - - - - 0.944
11. tm4sf4 ENSDARG00000040747 65 1.832 - - 0.935 - - - 0.897 - - transmembrane 4 L six family member 4 [Source:ZFIN;Acc:ZDB-GENE-040801-231]
12. RD3L RD3L 15 1.81 - - - 1.000 - - 0.810 - -
13. m17 ENSDARG00000035435 28 1.803 - 0.803 - - - 1.000 - - - IL-6 subfamily cytokine M17 [Source:ZFIN;Acc:ZDB-GENE-060526-368]
14. TSPAN1 ENSDARG00000052027 4 1.802 - - - - 0.802 1.000 - - - tetraspanin 1 [Source:ZFIN;Acc:ZDB-GENE-070502-5]
15. ntf7 ntf7 72 1.791 - 0.881 - - - 0.910 - - -
16. zeb1a ENSDARG00000016788 48 1.777 - 0.815 - 0.962 - - - - - zinc finger E-box binding homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-070912-124]
17. ZC2HC1C ENSDARG00000070526 14 1.772 - - - - - 1.000 - - 0.772 zinc finger, C2HC-type containing 1C [Source:ZFIN;Acc:ZDB-GENE-111020-1]
18. arrb2a ENSDARG00000039215 5 1.771 - - - 1.000 0.771 - - - - arrestin, beta 2a [Source:ZFIN;Acc:ZDB-GENE-030131-29]
19. zgc:152891 ENSDARG00000016789 11 1.768 - 0.905 - - - 0.863 - - - zgc:152891 [Source:ZFIN;Acc:ZDB-GENE-061013-229]
20. si:ch211-117m20.4 ENSDARG00000094286 7 1.757 - - 0.985 - - - - - 0.772 si:ch211-117m20.4 [Source:ZFIN;Acc:ZDB-GENE-060526-20]
21. FAIM2 FAIM2 43 1.755 - - - - - 0.945 0.810 - -
22. si:ch211-208f21.2 ENSDARG00000094177 61 1.754 - - - 1.000 - 0.754 - - - si:ch211-208f21.2 [Source:ZFIN;Acc:ZDB-GENE-110914-134]
23. paqr7a ENSDARG00000100462 15 1.753 - 0.753 - 1.000 - - - - - progestin and adipoQ receptor family member VII, a [Source:ZFIN;Acc:ZDB-GENE-070705-346]
24. cyb5d1 ENSDARG00000056007 67 1.745 - - - - - 0.905 0.840 - - cytochrome b5 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050417-173]
25. rnf220b ENSDARG00000075183 53 1.713 - - 0.835 - - - 0.878 - - ring finger protein 220b [Source:ZFIN;Acc:ZDB-GENE-081104-195]
26. si:ch211-23l10.3 ENSDARG00000073998 113 1.713 - 0.843 - - - 0.870 - - - si:ch211-23l10.3 [Source:ZFIN;Acc:ZDB-GENE-091204-25]
27. gcnt3 ENSDARG00000060471 37 1.699 - 0.786 - - - 0.913 - - - glucosaminyl (N-acetyl) transferase 3, mucin type [Source:ZFIN;Acc:ZDB-GENE-110411-253]
28. cacnb2b ENSDARG00000055565 20 1.698 - 0.845 - - - 0.853 - - - calcium channel, voltage-dependent, beta 2b [Source:ZFIN;Acc:ZDB-GENE-050208-129]
29. ptk6b ENSDARG00000059956 44 1.697 - - - - 0.802 0.895 - - - PTK6 protein tyrosine kinase 6b [Source:ZFIN;Acc:ZDB-GENE-060929-1150]
30. cryba2a ENSDARG00000030349 1342 1.69 - 0.905 - - - - - - 0.785 crystallin, beta A2a [Source:ZFIN;Acc:ZDB-GENE-040625-8]
31. ftr64 ENSDARG00000101514 33 1.687 - - - - - 0.843 0.844 - - finTRIM family, member 64 [Source:ZFIN;Acc:ZDB-GENE-090508-8]
32. CU855815.2 CU855815.2 80 1.682 - 0.759 - - - - 0.923 - -
33. C25H12orf5 C25H12orf5 65 1.678 - 0.882 - - - 0.796 - - -
34. bfb ENSDARG00000005616, ENSDARG00000110364 30 1.673 - 0.800 0.873 - - - - - - complement component bfb [Source:ZFIN;Acc:ZDB-GENE-990415-34]
35. FP236276.2 FP236276.2 43 1.663 - - - - - 0.885 0.778 - -
36. ugt5b4 ENSDARG00000091916 130 1.657 - 0.893 0.764 - - - - - - UDP glucuronosyltransferase 5 family, polypeptide B4 [Source:ZFIN;Acc:ZDB-GENE-070112-2332]
37. si:ch211-137i24.10 ENSDARG00000057706, ENSDARG00000116375 99 1.646 - - 0.709 - - - 0.937 - - si:ch211-137i24.10 [Source:ZFIN;Acc:ZDB-GENE-060526-34]
38. lingo2 lingo2 67 1.623 - 0.903 - - - - - - 0.720
39. mir34 176 1.61 - 0.769 0.841 - - - - - - microRNA 34
40. zgc:112408 ENSDARG00000016207, ENSDARG00000116632, ENSDARG00000117067 19 1.608 - - - - - 0.833 0.775 - - zgc:112408 [Source:ZFIN;Acc:ZDB-GENE-050417-63]
41. NUGGC_1 NUGGC_1 8 1.605 - - - - 0.802 - - 0.803 -
42. TRPM4 TRPM4 60 1.604 - 0.820 - - - 0.784 - - -
43. abcd1 ENSDARG00000074876 6 1.598 - - - 0.826 - - - - 0.772 ATP-binding cassette, sub-family D (ALD), member 1 [Source:ZFIN;Acc:ZDB-GENE-050517-27]
44. CABZ01012857.1 CABZ01012857.1 78 1.591 - 0.843 - - - - 0.748 - -
45. C3H17orf53 C3H17orf53 191 1.558 - 0.814 - - - - - 0.744 -
46. BX323064.1 ENSDARG00000099914 11 1.542 - - 0.759 - - - 0.783 - -
47. SNORA73_1 SNORA73_1 85 1.536 - 0.814 - - - - 0.722 - -
48. hsf4 ENSDARG00000013251 5 1.535 - - - - - - 0.810 - 0.725 heat shock transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-050306-18]
49. chrnb2b ENSDARG00000017790 155 1.533 - 0.758 0.775 - - - - - - cholinergic receptor, nicotinic, beta 2b [Source:ZFIN;Acc:ZDB-GENE-070821-3]
50. eng2b eng2b 865 1.518 - - - - - - 0.810 - 0.708
51. irg1l ENSDARG00000062788 503 1.512 - 0.701 - - - - 0.811 - - immunoresponsive gene 1, like [Source:ZFIN;Acc:ZDB-GENE-061103-301]
52. mmachc ENSDARG00000043877 29 1.502 - - - - - - 0.786 0.716 - methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria [Source:ZFIN;Acc:ZDB-GENE-030131-3167]
53. 5S_rRNA_2 5S_rRNA_2 89 1.466 - 0.765 - - - 0.701 - - -
54. ugt2b5 ugt2b5 17 1.465 - - - - - 0.734 0.731 - -
55. ccdc11 ccdc11 79 1.437 - 0.707 - - - 0.730 - - -
56. acot7 ENSDARG00000018653 693 1.435 - 0.702 0.733 - - - - - - acyl-CoA thioesterase 7 [Source:ZFIN;Acc:ZDB-GENE-040912-42]
57. zgc:194930 ENSDARG00000079584 326 1.428 - - - - - 0.701 0.727 - - zgc:194930 [Source:ZFIN;Acc:ZDB-GENE-081022-166]
58. agpat9l ENSDARG00000006491, ENSDARG00000109952, ENSDARG00000112415 191 1.428 - - 0.727 - - 0.701 - - - 1-acylglycerol-3-phosphate O-acyltransferase 9, like [Source:ZFIN;Acc:ZDB-GENE-060531-19]
59. v2rh11 ENSDARG00000115088 1 1 - - - - - 1.000 - - - vomeronasal 2 receptor, h11 [Source:ZFIN;Acc:ZDB-GENE-050419-222]
60. FAM78B FAM78B 1 1 - - - - - - - - 1.000
61. CR853287.1 CR853287.1 6 1 - - - 1.000 - - - - -
62. syndig1l ENSDARG00000042390, ENSDARG00000113400 17 1 - - - - - 1.000 - - - synapse differentiation inducing 1-like [Source:ZFIN;Acc:ZDB-GENE-041001-116]
63. CABZ01064973.2 CABZ01064973.2 0 1 - - - 1.000 - - - - -
64. cldn17 ENSDARG00000099950 14 1 - - - 1.000 - - - - - claudin 17 [Source:ZFIN;Acc:ZDB-GENE-070821-2]
65. slc25a19 ENSDARG00000100385 2 1 - - - - - 1.000 - - - solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19 [Source:ZFIN;Acc:ZDB-GENE-050417-292]
66. si:ch73-176g19.2 si:ch73-176g19.2 2 1 - - - 1.000 - - - - -
67. HMGXB3 ENSDARG00000077823 2 1 - - - - - 1.000 - - - HMG box domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-111012-1]
68. si:dkey-199m13.9 si:dkey-199m13.9 20 1 - - - 1.000 - - - - -
69. NINL ENSDARG00000098414 0 1 - - - 1.000 - - - - - ninein-like [Source:ZFIN;Acc:ZDB-GENE-130530-768]
70. si:dkey-58f10.4 ENSDARG00000094820 3 1 - - - 1.000 - - - - - si:dkey-58f10.4 [Source:ZFIN;Acc:ZDB-GENE-060526-318]
71. wnt8b ENSDARG00000006911 98 1 - - - - - - 1.000 - - wingless-type MMTV integration site family, member 8b [Source:ZFIN;Acc:ZDB-GENE-990415-279]
72. si:ch211-10j20.1 si:ch211-10j20.1 24 1 - - - 1.000 - - - - -
73. ripply2 ENSDARG00000070535 18 1 - - - - - 1.000 - - - ripply transcriptional repressor 2 [Source:ZFIN;Acc:ZDB-GENE-060113-2]
74. CMA1_8 CMA1_8 10 1 - - - - - 1.000 - - -
75. zgc:114037_3 17 1 - - - 1.000 - - - - - zgc:114037
76. CELA1_2 CELA1_2 2 1 - - - - - 1.000 - - -
77. ANO2 ENSDARG00000101363 1 1 - - - 1.000 - - - - - anoctamin 2 [Source:ZFIN;Acc:ZDB-GENE-060503-62]
78. cnn1b ENSDARG00000102398 40 1 - - - - - - 1.000 - - calponin 1, basic, smooth muscle, b [Source:ZFIN;Acc:ZDB-GENE-091118-54]
79. zgc:114037_1 10 1 - - - 1.000 - - - - - zgc:114037
80. COPS6 5 1 - - - 1.000 - - - - - COP9 signalosome subunit 6
81. NMI 3 1 - - - - - 1.000 - - - N-myc (and STAT) interactor
82. APOD_1 APOD_1 7 1 - - - 1.000 - - - - -
83. NAT14 ENSDARG00000115349 21 1 - - - - - 1.000 - - - N-acetyltransferase 14 (GCN5-related, putative) [Source:ZFIN;Acc:ZDB-GENE-060825-15]
84. zdhhc18b ENSDARG00000105034 1 1 - - - 1.000 - - - - - zinc finger, DHHC-type containing 18b [Source:ZFIN;Acc:ZDB-GENE-030131-6315]
85. CU550716.4 CU550716.4 14 1 - - - 1.000 - - - - -
86. BICD1 BICD1 9 1 - - - - - 1.000 - - -
87. BX284672.1 BX284672.1 11 1 - - - - - 1.000 - - -
88. UNC119 UNC119 104 1 - - - 1.000 - - - - -
89. BX323793.3 BX323793.3 7 1 - - - - - 1.000 - - -
90. mag ENSDARG00000104023 7 1 - - - 1.000 - - - - - myelin associated glycoprotein [Source:ZFIN;Acc:ZDB-GENE-041217-24]
91. gp1bb ENSDARG00000074441 116 1 - - - - - 1.000 - - - glycoprotein Ib platelet subunit beta [Source:ZFIN;Acc:ZDB-GENE-081104-406]
92. crygm2d11 ENSDARG00000069827 1 1 - - - - - - - - 1.000 crystallin, gamma M2d11 [Source:ZFIN;Acc:ZDB-GENE-071004-42]
93. POGK POGK 1 1 - - - - - 1.000 - - -
94. gnb3a ENSDARG00000004358, ENSDARG00000113470 11 1 - - - 1.000 - - - - - guanine nucleotide binding protein (G protein), beta polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-040718-134]
95. lactbl1a ENSDARG00000089063, ENSDARG00000114144, ENSDARG00000116950 0 1 - - - 1.000 - - - - - lactamase, beta-like 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7625]
96. SPAG16 7 1 - - - 1.000 - - - - - sperm associated antigen 16
97. oscp1a ENSDARG00000101222, ENSDARG00000104403 17 1 - - - - - 1.000 - - - organic solute carrier partner 1a [Source:ZFIN;Acc:ZDB-GENE-080204-2]
98. oxt ENSDARG00000042845 2 1 - - - - - - - - 1.000 oxytocin [Source:ZFIN;Acc:ZDB-GENE-030407-1]
99. SLC22A7_1 SLC22A7_1 2 1 - - - 1.000 - - - - -
100. PRTFDC1 ENSDARG00000011683 11 1 - - - - - 1.000 - - - phosphoribosyl transferase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-980526-324]

There are 1185 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA