Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for pdk3a

Gene Name Gene ID Reads Annotation
pdk3a ENSDARG00000014527 15 pyruvate dehydrogenase kinase, isozyme 3a [Source:ZFIN;Acc:ZDB-GENE-061220-3]










Genes with expression patterns similar to pdk3a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pdk3a ENSDARG00000014527 15 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 pyruvate dehydrogenase kinase, isozyme 3a [Source:ZFIN;Acc:ZDB-GENE-061220-3]
2. si:busm1-228j01.5 si:busm1-228j01.5 9 2.523 - 0.905 - - - 0.833 0.785 - -
3. zgc:112234_5 ENSDARG00000099514, ENSDARG00000102806, ENSDARG00000104588, ENSDARG00000105340, ENSDARG00000105393, ENSDARG00000105414, ENSDARG00000105468, ENSDARG00000105483, ENSDARG00000105507, ENSDARG00000111934 6 1.983 - - 0.983 1.000 - - - - - zgc:112234 [Source:NCBI gene;Acc:554097]
4. si:dkey-167i21.4 si:dkey-167i21.4 12 1.94 - - 0.940 - - - - - 1.000
5. CABZ01074899.1 CABZ01074899.1 89 1.911 - 0.935 - - - 0.976 - - -
6. si:ch211-219a15.3 ENSDARG00000087659 12 1.899 - - - - - 1.000 - - 0.899 si:ch211-219a15.3 [Source:ZFIN;Acc:ZDB-GENE-060503-214]
7. sox11a ENSDARG00000077811 25 1.872 - - 0.872 - - 1.000 - - - SRY (sex determining region Y)-box 11a [Source:ZFIN;Acc:ZDB-GENE-980526-395]
8. CR854827.2 ENSDARG00000097227 15 1.86 - - 0.993 - - 0.867 - - -
9. PLCG2 ENSDARG00000068763 11 1.848 - 0.905 - - - 0.943 - - - phospholipase C, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9532]
10. RBM33_1 RBM33_1 7 1.837 - - - 0.893 - - - - 0.944
11. tm4sf4 ENSDARG00000040747 65 1.832 - - 0.935 - - - 0.897 - - transmembrane 4 L six family member 4 [Source:ZFIN;Acc:ZDB-GENE-040801-231]
12. RD3L RD3L 15 1.81 - - - 1.000 - - 0.810 - -
13. m17 ENSDARG00000035435 28 1.803 - 0.803 - - - 1.000 - - - IL-6 subfamily cytokine M17 [Source:ZFIN;Acc:ZDB-GENE-060526-368]
14. TSPAN1 ENSDARG00000052027 4 1.802 - - - - 0.802 1.000 - - - tetraspanin 1 [Source:ZFIN;Acc:ZDB-GENE-070502-5]
15. ntf7 ntf7 72 1.791 - 0.881 - - - 0.910 - - -
16. zeb1a ENSDARG00000016788 48 1.777 - 0.815 - 0.962 - - - - - zinc finger E-box binding homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-070912-124]
17. ZC2HC1C ENSDARG00000070526 14 1.772 - - - - - 1.000 - - 0.772 zinc finger, C2HC-type containing 1C [Source:ZFIN;Acc:ZDB-GENE-111020-1]
18. arrb2a ENSDARG00000039215 5 1.771 - - - 1.000 0.771 - - - - arrestin, beta 2a [Source:ZFIN;Acc:ZDB-GENE-030131-29]
19. zgc:152891 ENSDARG00000016789 11 1.768 - 0.905 - - - 0.863 - - - zgc:152891 [Source:ZFIN;Acc:ZDB-GENE-061013-229]
20. si:ch211-117m20.4 ENSDARG00000094286 7 1.757 - - 0.985 - - - - - 0.772 si:ch211-117m20.4 [Source:ZFIN;Acc:ZDB-GENE-060526-20]
21. FAIM2 FAIM2 43 1.755 - - - - - 0.945 0.810 - -
22. si:ch211-208f21.2 ENSDARG00000094177 61 1.754 - - - 1.000 - 0.754 - - - si:ch211-208f21.2 [Source:ZFIN;Acc:ZDB-GENE-110914-134]
23. paqr7a ENSDARG00000100462 15 1.753 - 0.753 - 1.000 - - - - - progestin and adipoQ receptor family member VII, a [Source:ZFIN;Acc:ZDB-GENE-070705-346]
24. cyb5d1 ENSDARG00000056007 67 1.745 - - - - - 0.905 0.840 - - cytochrome b5 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050417-173]
25. rnf220b ENSDARG00000075183 53 1.713 - - 0.835 - - - 0.878 - - ring finger protein 220b [Source:ZFIN;Acc:ZDB-GENE-081104-195]
26. si:ch211-23l10.3 ENSDARG00000073998 113 1.713 - 0.843 - - - 0.870 - - - si:ch211-23l10.3 [Source:ZFIN;Acc:ZDB-GENE-091204-25]
27. gcnt3 ENSDARG00000060471 37 1.699 - 0.786 - - - 0.913 - - - glucosaminyl (N-acetyl) transferase 3, mucin type [Source:ZFIN;Acc:ZDB-GENE-110411-253]
28. cacnb2b ENSDARG00000055565 20 1.698 - 0.845 - - - 0.853 - - - calcium channel, voltage-dependent, beta 2b [Source:ZFIN;Acc:ZDB-GENE-050208-129]
29. ptk6b ENSDARG00000059956 44 1.697 - - - - 0.802 0.895 - - - PTK6 protein tyrosine kinase 6b [Source:ZFIN;Acc:ZDB-GENE-060929-1150]
30. cryba2a ENSDARG00000030349 1342 1.69 - 0.905 - - - - - - 0.785 crystallin, beta A2a [Source:ZFIN;Acc:ZDB-GENE-040625-8]
31. ftr64 ENSDARG00000101514 33 1.687 - - - - - 0.843 0.844 - - finTRIM family, member 64 [Source:ZFIN;Acc:ZDB-GENE-090508-8]
32. CU855815.2 CU855815.2 80 1.682 - 0.759 - - - - 0.923 - -
33. C25H12orf5 C25H12orf5 65 1.678 - 0.882 - - - 0.796 - - -
34. bfb ENSDARG00000005616, ENSDARG00000110364 30 1.673 - 0.800 0.873 - - - - - - complement component bfb [Source:ZFIN;Acc:ZDB-GENE-990415-34]
35. FP236276.2 FP236276.2 43 1.663 - - - - - 0.885 0.778 - -
36. ugt5b4 ENSDARG00000091916 130 1.657 - 0.893 0.764 - - - - - - UDP glucuronosyltransferase 5 family, polypeptide B4 [Source:ZFIN;Acc:ZDB-GENE-070112-2332]
37. si:ch211-137i24.10 ENSDARG00000057706, ENSDARG00000116375 99 1.646 - - 0.709 - - - 0.937 - - si:ch211-137i24.10 [Source:ZFIN;Acc:ZDB-GENE-060526-34]
38. lingo2 lingo2 67 1.623 - 0.903 - - - - - - 0.720
39. mir34 176 1.61 - 0.769 0.841 - - - - - - microRNA 34
40. zgc:112408 ENSDARG00000016207, ENSDARG00000116632, ENSDARG00000117067 19 1.608 - - - - - 0.833 0.775 - - zgc:112408 [Source:ZFIN;Acc:ZDB-GENE-050417-63]
41. NUGGC_1 NUGGC_1 8 1.605 - - - - 0.802 - - 0.803 -
42. TRPM4 TRPM4 60 1.604 - 0.820 - - - 0.784 - - -
43. abcd1 ENSDARG00000074876 6 1.598 - - - 0.826 - - - - 0.772 ATP-binding cassette, sub-family D (ALD), member 1 [Source:ZFIN;Acc:ZDB-GENE-050517-27]
44. CABZ01012857.1 CABZ01012857.1 78 1.591 - 0.843 - - - - 0.748 - -
45. C3H17orf53 C3H17orf53 191 1.558 - 0.814 - - - - - 0.744 -
46. BX323064.1 ENSDARG00000099914 11 1.542 - - 0.759 - - - 0.783 - -
47. SNORA73_1 SNORA73_1 85 1.536 - 0.814 - - - - 0.722 - -
48. hsf4 ENSDARG00000013251 5 1.535 - - - - - - 0.810 - 0.725 heat shock transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-050306-18]
49. chrnb2b ENSDARG00000017790 155 1.533 - 0.758 0.775 - - - - - - cholinergic receptor, nicotinic, beta 2b [Source:ZFIN;Acc:ZDB-GENE-070821-3]
50. eng2b eng2b 865 1.518 - - - - - - 0.810 - 0.708
51. irg1l ENSDARG00000062788 503 1.512 - 0.701 - - - - 0.811 - - immunoresponsive gene 1, like [Source:ZFIN;Acc:ZDB-GENE-061103-301]
52. mmachc ENSDARG00000043877 29 1.502 - - - - - - 0.786 0.716 - methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria [Source:ZFIN;Acc:ZDB-GENE-030131-3167]
53. 5S_rRNA_2 5S_rRNA_2 89 1.466 - 0.765 - - - 0.701 - - -
54. ugt2b5 ugt2b5 17 1.465 - - - - - 0.734 0.731 - -
55. ccdc11 ccdc11 79 1.437 - 0.707 - - - 0.730 - - -
56. acot7 ENSDARG00000018653 693 1.435 - 0.702 0.733 - - - - - - acyl-CoA thioesterase 7 [Source:ZFIN;Acc:ZDB-GENE-040912-42]
57. agpat9l ENSDARG00000006491, ENSDARG00000109952, ENSDARG00000112415 191 1.428 - - 0.727 - - 0.701 - - - 1-acylglycerol-3-phosphate O-acyltransferase 9, like [Source:ZFIN;Acc:ZDB-GENE-060531-19]
58. zgc:194930 ENSDARG00000079584 326 1.428 - - - - - 0.701 0.727 - - zgc:194930 [Source:ZFIN;Acc:ZDB-GENE-081022-166]
59. si:dkey-119g10.4 si:dkey-119g10.4 7 1 - - - - - 1.000 - - -
60. ftr06 ENSDARG00000018506, ENSDARG00000053450 17 1 - - - - - 1.000 - - - finTRIM family, member 6 [Source:ZFIN;Acc:ZDB-GENE-070912-228]
61. AC024175.21 AC024175.21 10 1 - - - 1.000 - - - - -
62. trpm5 ENSDARG00000059792 3 1 - - - - - 1.000 - - - transient receptor potential cation channel, subfamily M, member 5 [Source:ZFIN;Acc:ZDB-GENE-060503-736]
63. si:dkey-29b11.3 ENSDARG00000087388 29 1 - - - 1.000 - - - - - si:dkey-29b11.3 [Source:ZFIN;Acc:ZDB-GENE-100922-178]
64. fam166b ENSDARG00000100292 14 1 - - - - - 1.000 - - - family with sequence similarity 166, member B [Source:ZFIN;Acc:ZDB-GENE-070209-41]
65. NINJ1 ENSDARG00000103663 43 1 - - - - - 1.000 - - - ninjurin 1 [Source:HGNC Symbol;Acc:HGNC:7824]
66. CR774179.1 ENSDARG00000086969 3 1 - - - 1.000 - - - - -
67. OTOS ENSDARG00000108475 180 1 - - - - - 1.000 - - - otospiralin [Source:ZFIN;Acc:ZDB-GENE-120601-1]
68. ENSDARG00000062524 ENSDARG00000062524 1 1 - - - - - - - - 1.000
69. si:ch211-244h4.1 si:ch211-244h4.1 1 1 - - - 1.000 - - - - -
70. C1QTNF6 C1QTNF6 2 1 - - - - - 1.000 - - -
71. CR356223.1 ENSDARG00000093865 1 1 - - - - - 1.000 - - -
72. Metazoa_SRP_15 Metazoa_SRP_15 2 1 - - - 1.000 - - - - -
73. dok1a ENSDARG00000078108 9 1 - - - - - 1.000 - - - docking protein 1a [Source:ZFIN;Acc:ZDB-GENE-080721-2]
74. CR855273.1 CR855273.1 2 1 - - - 1.000 - - - - -
75. or115-12 ENSDARG00000044748 2 1 - - - - - 1.000 - - - odorant receptor, family F, subfamily 115, member 12 [Source:ZFIN;Acc:ZDB-GENE-070806-13]
76. NRP2 NRP2 5 1 - - - 1.000 - - - - -
77. CABZ01084273.1 CABZ01084273.1 16 1 - - - - - 1.000 - - -
78. CMKLR1_1 CMKLR1_1 2 1 - - - 1.000 - - - - -
79. CT583679.2 CT583679.2 10 1 - - - 1.000 - - - - -
80. zgc:153681 ENSDARG00000086017 0 1 - - - 1.000 - - - - - zgc:153681 [Source:ZFIN;Acc:ZDB-GENE-060825-299]
81. FNDC3A ENSDARG00000105503 11 1 - - - - - 1.000 - - - fibronectin type III domain containing 3A [Source:ZFIN;Acc:ZDB-GENE-030131-7015]
82. BX323854.4 BX323854.4 3 1 - - - - - 1.000 - - -
83. pcdh15b ENSDARG00000008127 2 1 - - - 1.000 - - - - - protocadherin-related 15b [Source:ZFIN;Acc:ZDB-GENE-050214-1]
84. si:zfos-754c12.2 ENSDARG00000089747 0 1 - - - 1.000 - - - - - si:zfos-754c12.2 [Source:ZFIN;Acc:ZDB-GENE-130531-27]
85. pcsk9 ENSDARG00000074185 8 1 - - - 1.000 - - - - - proprotein convertase subtilisin/kexin type 9 [Source:ZFIN;Acc:ZDB-GENE-060927-1]
86. si:ch211-234c11.3 ENSDARG00000093615 1 1 - - - 1.000 - - - - - si:ch211-234c11.3 [Source:ZFIN;Acc:ZDB-GENE-110914-93]
87. asic2 ENSDARG00000006849 18 1 - - - - - - - - 1.000 acid-sensing (proton-gated) ion channel 2 [Source:ZFIN;Acc:ZDB-GENE-040513-4]
88. si:ch211-133l5.4 ENSDARG00000092533 5 1 - - - 1.000 - - - - - si:ch211-133l5.4 [Source:ZFIN;Acc:ZDB-GENE-081104-114]
89. foxi1 ENSDARG00000104566 176 1 - - - - - 1.000 - - - forkhead box i1 [Source:ZFIN;Acc:ZDB-GENE-030505-1]
90. GMEB2 ENSDARG00000093240 6 1 - - - - - 1.000 - - - glucocorticoid modulatory element binding protein 2 [Source:HGNC Symbol;Acc:HGNC:4371]
91. syt15 ENSDARG00000079926 8 1 - - - - - 1.000 - - - synaptotagmin XV [Source:ZFIN;Acc:ZDB-GENE-090527-2]
92. itga2.1 ENSDARG00000069390 6 1 - - - - - 1.000 - - - integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-111011-4]
93. TMEM220 ENSDARG00000088981 28 1 - - - - 1.000 - - - - transmembrane protein 220 [Source:ZFIN;Acc:ZDB-GENE-131121-194]
94. thbs4a ENSDARG00000102777 625 1 - - - - - 1.000 - - - thrombospondin 4a [Source:ZFIN;Acc:ZDB-GENE-080215-11]
95. nkx3.3 ENSDARG00000069327, ENSDARG00000110589 66 1 - - - - - 1.000 - - - NK3 homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-050306-27]
96. irak1 ENSDARG00000025949 19 1 - - - - - 1.000 - - - interleukin-1 receptor-associated kinase 1 [Source:ZFIN;Acc:ZDB-GENE-071116-5]
97. BX324003.3 BX324003.3 1 1 - - - 1.000 - - - - -
98. si:dkey-112e17.1 ENSDARG00000093201 1 1 - - - - - 1.000 - - - si:dkey-112e17.1 [Source:ZFIN;Acc:ZDB-GENE-060526-193]
99. CT573356.3 CT573356.3 2 1 - - - - - 1.000 - - -
100. tmem125b ENSDARG00000075980 2 1 - - - 1.000 - - - - - transmembrane protein 125b [Source:ZFIN;Acc:ZDB-GENE-080220-54]

There are 1185 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA