Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for pdgfra_1

Gene Name Gene ID Reads Annotation
pdgfra_1 ENSDARG00000070494, ENSDARG00000113952 1996 platelet-derived growth factor receptor, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-208]










Genes with expression patterns similar to pdgfra_1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pdgfra_1 ENSDARG00000070494, ENSDARG00000113952 1996 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 platelet-derived growth factor receptor, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-208]
2. cetn4 ENSDARG00000041215 898 1.727 - - - - - - 0.804 - 0.923 centrin 4 [Source:ZFIN;Acc:ZDB-GENE-030826-21]
3. chd2 ENSDARG00000060687 3832 1.718 - 0.847 - - - 0.871 - - - chromodomain helicase DNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-050419-256]
4. qdpra ENSDARG00000040190 4064 1.717 - - - - - - 0.820 - 0.897 quinoid dihydropteridine reductase a [Source:ZFIN;Acc:ZDB-GENE-070705-197]
5. wdfy2 ENSDARG00000040453 406 1.714 - 0.804 - - - - - - 0.910 WD repeat and FYVE domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-041111-211]
6. si:dkeyp-55f12.3 ENSDARG00000042345 1812 1.706 - - - - - - 0.846 - 0.860 si:dkeyp-55f12.3 [Source:ZFIN;Acc:ZDB-GENE-041001-118]
7. sdr16c5a ENSDARG00000016233 2413 1.697 - 0.799 - - - - - - 0.898 short chain dehydrogenase/reductase family 16C, member 5a [Source:ZFIN;Acc:ZDB-GENE-040426-2049]
8. s1pr5a ENSDARG00000040526 923 1.673 - - - - - 0.761 - - 0.912 sphingosine-1-phosphate receptor 5a [Source:ZFIN;Acc:ZDB-GENE-041114-188]
9. trim33 ENSDARG00000016181 1718 1.649 - - - - - - 0.735 - 0.914 tripartite motif containing 33 [Source:ZFIN;Acc:ZDB-GENE-030131-2773]
10. slc35f6 ENSDARG00000016745, ENSDARG00000114790 3823 1.639 - - - - - - 0.797 - 0.842 solute carrier family 35, member F6 [Source:ZFIN;Acc:ZDB-GENE-040718-297]
11. psmd12 ENSDARG00000052377 7763 1.638 - - - - - - 0.715 - 0.923 proteasome 26S subunit, non-ATPase 12 [Source:ZFIN;Acc:ZDB-GENE-030131-617]
12. sgut1 3470 1.632 0.728 - - - - - - - 0.904 SGT1 homolog, MIS12 kinetochore complex assembly cochaperone, transcript variant X1
13. otud5a ENSDARG00000059006 2073 1.63 - - - - - - 0.746 - 0.884 OTU deubiquitinase 5a [Source:ZFIN;Acc:ZDB-GENE-030616-61]
14. bcl2l1 ENSDARG00000008434 1956 1.629 - - - - - - 0.719 - 0.910 bcl2-like 1 [Source:ZFIN;Acc:ZDB-GENE-010730-1]
15. zgc:114045 ENSDARG00000069334, ENSDARG00000112063 991 1.621 - 0.717 - - - - - - 0.904 zgc:114045 [Source:ZFIN;Acc:ZDB-GENE-050913-119]
16. elk3 ENSDARG00000018688, ENSDARG00000110853 1108 1.621 - - - - - - 0.708 - 0.913 ELK3, ETS-domain protein [Source:ZFIN;Acc:ZDB-GENE-030716-2]
17. yipf3 ENSDARG00000020449 3312 1.607 - - - - - - 0.741 - 0.866 Yip1 domain family, member 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6443]
18. nfe2l3 ENSDARG00000019810 3682 1.605 - - - - - - 0.821 - 0.784 nuclear factor, erythroid 2-like 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2334]
19. ahcyl1 ENSDARG00000056331 1765 1.605 - - - - - - 0.710 - 0.895 adenosylhomocysteinase-like 1 [Source:ZFIN;Acc:ZDB-GENE-021206-7]
20. faub ENSDARG00000043663, ENSDARG00000111416, ENSDARG00000113054 1451 1.604 - - - - - - 0.700 - 0.904 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed b [Source:ZFIN;Acc:ZDB-GENE-050417-416]
21. oxsr1a ENSDARG00000034189 4314 1.601 - 0.721 - - - - 0.880 - - oxidative stress responsive 1a [Source:ZFIN;Acc:ZDB-GENE-070620-25]
22. cbfa2t2 ENSDARG00000074337 4323 1.601 - - - - - - 0.792 - 0.809 core-binding factor, runt domain, alpha subunit 2; translocated to, 2 [Source:ZFIN;Acc:ZDB-GENE-070209-1]
23. tfg ENSDARG00000003641, ENSDARG00000115188 3834 1.588 - 0.807 - - - - 0.781 - - trk-fused gene [Source:ZFIN;Acc:ZDB-GENE-030131-8410]
24. si:ch211-208h7.4 si:ch211-208h7.4 1334 1.583 - 0.775 - - - - 0.808 - -
25. ilf3a ENSDARG00000058660, ENSDARG00000116860 3760 1.582 - - - - - - 0.780 - 0.802 interleukin enhancer binding factor 3a [Source:ZFIN;Acc:ZDB-GENE-030131-3151]
26. thoc7 ENSDARG00000015394 3824 1.582 - - - - - - 0.731 - 0.851 THO complex 7 [Source:ZFIN;Acc:ZDB-GENE-040801-17]
27. gnmt ENSDARG00000006840 2422 1.554 - - - - - - 0.712 - 0.842 glycine N-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-040227-1]
28. CABZ01013938.1 CABZ01013938.1 4497 1.547 - 0.721 - - - - 0.826 - -
29. sec23a ENSDARG00000104230 3910 1.533 - - - - - - 0.812 - 0.721 Sec23 homolog A, COPII coat complex component [Source:ZFIN;Acc:ZDB-GENE-040426-2823]
30. pnp5a ENSDARG00000078619 1461 1.532 - 0.774 - - - - 0.758 - - purine nucleoside phosphorylase 5a [Source:ZFIN;Acc:ZDB-GENE-040426-2553]
31. PPAP2A PPAP2A 2409 1.531 - 0.706 - - - - 0.825 - -
32. cpne1 ENSDARG00000075536 4063 1.524 - - - - - - 0.741 - 0.783 copine I [Source:ZFIN;Acc:ZDB-GENE-030131-3562]
33. emilin1b ENSDARG00000026166 1530 1.515 - - - - - - 0.734 - 0.781 elastin microfibril interfacer 1b [Source:ZFIN;Acc:ZDB-GENE-060818-36]
34. myl6 ENSDARG00000008494, ENSDARG00000115496 16296 1.508 - - - - - - 0.771 - 0.737 myosin, light chain 6, alkali, smooth muscle and non-muscle [Source:ZFIN;Acc:ZDB-GENE-041010-28]
35. hsdl2 ENSDARG00000002523 2746 1.508 - - - - - - 0.785 - 0.723 hydroxysteroid dehydrogenase like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1066]
36. mogat3b ENSDARG00000003635 394 1.494 0.702 - - - - - 0.792 - - monoacylglycerol O-acyltransferase 3b [Source:ZFIN;Acc:ZDB-GENE-110302-2]
37. appbp2 ENSDARG00000007566 1961 1.493 - - - - - 0.747 - - 0.746 amyloid beta precursor protein (cytoplasmic tail) binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1715]
38. tbca ENSDARG00000016754 6427 1.487 - - - - - 0.703 0.784 - - tubulin cofactor a [Source:ZFIN;Acc:ZDB-GENE-040426-962]
39. thrap3b ENSDARG00000098228 4396 1.481 - 0.753 - - - 0.728 - - - thyroid hormone receptor associated protein 3b [Source:ZFIN;Acc:ZDB-GENE-040516-9]
40. mst4 mst4 1672 1.48 0.750 0.730 - - - - - - -
41. MTHFS ENSDARG00000104487 770 1.478 - 0.721 - - - - 0.757 - - 5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase) [Source:ZFIN;Acc:ZDB-GENE-130103-5]
42. si:dkey-226l10.6 ENSDARG00000087483 1651 1.47 - - - - - - 0.724 - 0.746 si:dkey-226l10.6 [Source:ZFIN;Acc:ZDB-GENE-030131-1550]
43. arhgef39 ENSDARG00000013476, ENSDARG00000114412 632 1.464 - 0.741 - - - - 0.723 - - Rho guanine nucleotide exchange factor (GEF) 39 [Source:ZFIN;Acc:ZDB-GENE-041114-28]
44. ctsf ENSDARG00000063095 4564 1.463 - - - - - - 0.738 - 0.725 cathepsin F [Source:ZFIN;Acc:ZDB-GENE-030131-9831]
45. naa40 ENSDARG00000024109, ENSDARG00000090570 4759 1.46 - 0.705 - - - - 0.755 - - N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050417-105]
46. lsm14ab ENSDARG00000100553 3837 1.452 - 0.710 - - - - - - 0.742 LSM14A mRNA processing body assembly factor b [Source:ZFIN;Acc:ZDB-GENE-040426-2462]
47. sorbs2b ENSDARG00000061603 2491 1.44 - 0.723 - - - - 0.717 - - sorbin and SH3 domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-070308-3]
48. CABIN1 ENSDARG00000079326 905 1.412 - 0.710 - - - - 0.702 - - calcineurin binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1735]
49. rap2b ENSDARG00000103032 2080 0.937 - - - - - - - - 0.937 RAP2B, member of RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040426-2818]
50. MRPS12_1 MRPS12_1 2714 0.937 - - - - - - - - 0.937
51. prrg4 ENSDARG00000030753 1008 0.934 - - - - - - - - 0.934 proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane) [Source:ZFIN;Acc:ZDB-GENE-050417-112]
52. scoca ENSDARG00000087333 1739 0.934 - - - - - - - - 0.934 short coiled-coil protein a [Source:ZFIN;Acc:ZDB-GENE-061013-114]
53. xrn1 ENSDARG00000091652 2864 0.931 - - - - - - - - 0.931 5'-3' exoribonuclease 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1203]
54. PHTF2 ENSDARG00000102123, ENSDARG00000114503 898 0.929 - - - - - - - - 0.929 putative homeodomain transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-040711-4]
55. xpot ENSDARG00000099652 3026 0.928 - - - - - - - - 0.928 exportin, tRNA (nuclear export receptor for tRNAs) [Source:ZFIN;Acc:ZDB-GENE-041210-4]
56. mark3 mark3 1375 0.928 - - - - - - - - 0.928
57. ypel5 ENSDARG00000088929 1011 0.926 - - - - - - - - 0.926 yippee-like 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1220]
58. strbp ENSDARG00000021455 1279 0.926 - - - - - - - - 0.926 spermatid perinuclear RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030729-18]
59. nucb1 ENSDARG00000054833 2009 0.926 - - - - - - - - 0.926 nucleobindin 1 [Source:ZFIN;Acc:ZDB-GENE-060825-222]
60. cdipt ENSDARG00000070686 1318 0.926 - - - - - - - - 0.926 CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase) [Source:ZFIN;Acc:ZDB-GENE-040426-2536]
61. uchl3 ENSDARG00000030177, ENSDARG00000109434 2843 0.926 - - - - - - - - 0.926 ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase) [Source:ZFIN;Acc:ZDB-GENE-050522-158]
62. wnk1b ENSDARG00000039392 3587 0.926 - - - - - - - - 0.926 WNK lysine deficient protein kinase 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2656]
63. copa ENSDARG00000004173 3977 0.926 - - - - - - - - 0.926 coatomer protein complex, subunit alpha [Source:ZFIN;Acc:ZDB-GENE-020905-2]
64. ctdsp1 ENSDARG00000040674 2828 0.926 - - - - - - - - 0.926 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-050522-523]
65. sel1l ENSDARG00000004581 2246 0.925 - - - - - - - - 0.925 SEL1L, ERAD E3 ligase adaptor subunit [Source:ZFIN;Acc:ZDB-GENE-041001-122]
66. CDC42EP1_1 CDC42EP1_1 449 0.925 - - - - - - - - 0.925
67. senp3b ENSDARG00000056741 1296 0.924 - - - - - - - - 0.924 SUMO specific peptidase 3b [Source:ZFIN;Acc:ZDB-GENE-030131-6714]
68. CT030204.3 CT030204.3 486 0.923 - - - - - - - - 0.923
69. ARHGEF15 ENSDARG00000100293 553 0.923 - - - - - - - - 0.923 Rho guanine nucleotide exchange factor (GEF) 15 [Source:ZFIN;Acc:ZDB-GENE-060526-292]
70. BX294110.1 ENSDARG00000096875 1761 0.923 - - - - - - - - 0.923
71. cnksr1 ENSDARG00000032932, ENSDARG00000109531 2272 0.922 - - - - - - - - 0.922 connector enhancer of kinase suppressor of Ras 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1802]
72. plekhh1 ENSDARG00000053835 2123 0.922 - - - - - - - - 0.922 pleckstrin homology domain containing, family H (with MyTH4 domain) member 1 [Source:ZFIN;Acc:ZDB-GENE-061219-1]
73. BX682552.2 BX682552.2 1427 0.921 - - - - - - - - 0.921
74. fam60a 825 0.92 - - - - - - - - 0.920 family with sequence similarity 60, member A
75. ecsit ENSDARG00000062834 896 0.92 - - - - - - - - 0.920 ECSIT signalling integrator [Source:ZFIN;Acc:ZDB-GENE-030131-1332]
76. traf2b ENSDARG00000101036 429 0.92 - - - - - - - - 0.920 Tnf receptor-associated factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5345]
77. rab11al ENSDARG00000014340 2116 0.919 - - - - - - - - 0.919 RAB11a, member RAS oncogene family, like [Source:ZFIN;Acc:ZDB-GENE-031118-188]
78. pank2 ENSDARG00000003311 881 0.919 - - - - - - - - 0.919 pantothenate kinase 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1952]
79. rab5if ENSDARG00000074790 8807 0.919 - - - - - - - - 0.919 RAB5 interacting factor [Source:ZFIN;Acc:ZDB-GENE-030131-5938]
80. TP53BP1 ENSDARG00000079000 997 0.919 - - - - - - - - 0.919 tumor protein p53 binding protein, 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3695]
81. aacs ENSDARG00000012468 1138 0.919 - - - - - - - - 0.919 acetoacetyl-CoA synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-903]
82. PPFIBP1_2 PPFIBP1_2 1274 0.918 - - - - - - - - 0.918
83. CTTNBP2NL CTTNBP2NL 260 0.918 - - - - - - - - 0.918
84. mfap2 ENSDARG00000059367 3774 0.918 - - - - - - - - 0.918 microfibril associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6710]
85. eci1 ENSDARG00000018002 2141 0.918 - - - - - - - - 0.918 enoyl-CoA delta isomerase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6033]
86. ing5b ENSDARG00000068175 2502 0.917 - - - - - - - - 0.917 inhibitor of growth family, member 5b [Source:ZFIN;Acc:ZDB-GENE-030616-462]
87. rel ENSDARG00000055276 571 0.916 - - - - - - - - 0.916 v-rel avian reticuloendotheliosis viral oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-040718-255]
88. rarga ENSDARG00000034117 1238 0.916 - - - - - - - - 0.916 retinoic acid receptor gamma a [Source:ZFIN;Acc:ZDB-GENE-980526-531]
89. ATF6B 960 0.916 - - - - - - - - 0.916 activating transcription factor 6 beta
90. dnajb9a ENSDARG00000052072 578 0.916 - - - - - - - - 0.916 DnaJ (Hsp40) homolog, subfamily B, member 9a [Source:ZFIN;Acc:ZDB-GENE-050626-115]
91. junbb ENSDARG00000104773 2536 0.916 - - - - - - - - 0.916 JunB proto-oncogene, AP-1 transcription factor subunit b [Source:ZFIN;Acc:ZDB-GENE-040426-2666]
92. zgc:174160 484 0.916 - - - - - - - - 0.916 zgc:174160, transcript variant X1
93. dlg1 ENSDARG00000009677 706 0.916 - - - - - - - - 0.916 discs, large homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-010724-8]
94. uck2b ENSDARG00000022213 1542 0.916 - - - - - - - - 0.916 uridine-cytidine kinase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5265]
95. TRAPPC10 ENSDARG00000098118 954 0.915 - - - - - - - - 0.915 trafficking protein particle complex 10 [Source:ZFIN;Acc:ZDB-GENE-131115-1]
96. NAIF1 ENSDARG00000062753 696 0.915 - - - - - - - - 0.915 nuclear apoptosis inducing factor 1 [Source:ZFIN;Acc:ZDB-GENE-081104-236]
97. NACC2 160 0.915 - - - - - - - - 0.915 NACC family member 2
98. sin3aa ENSDARG00000079716 580 0.915 - - - - - - - - 0.915 SIN3 transcription regulator family member Aa [Source:ZFIN;Acc:ZDB-GENE-070620-3]
99. acot9.2 ENSDARG00000058390, ENSDARG00000113544 438 0.914 - - - - - - - - 0.914 acyl-CoA thioesterase 9, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-051113-136]
100. wnt10a ENSDARG00000017155 491 0.914 - - - - - - - - 0.914 wingless-type MMTV integration site family, member 10a [Source:ZFIN;Acc:ZDB-GENE-990415-278]

There are 954 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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