Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for pdgfra

Gene Name Gene ID Reads Annotation
pdgfra ENSDARG00000070494, ENSDARG00000113952 6 platelet-derived growth factor receptor, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-208]










Genes with expression patterns similar to pdgfra

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pdgfra ENSDARG00000070494, ENSDARG00000113952 6 5 1.000 1.000 1.000 - 1.000 1.000 - - - platelet-derived growth factor receptor, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-208]
2. si:ch211-196n4.5 si:ch211-196n4.5 63 1.978 - 0.978 - - - 1.000 - - -
3. acoxl ENSDARG00000020149 14 1.909 - 1.000 0.909 - - - - - - acyl-CoA oxidase-like [Source:ZFIN;Acc:ZDB-GENE-081107-18]
4. si:ch211-155d24.7 si:ch211-155d24.7 17 1.909 - - 0.909 - - 1.000 - - -
5. TECPR1 TECPR1 173 1.907 1.000 0.907 - - - - - - -
6. ACBD3 ENSDARG00000042623 159 1.89 - 0.939 - - - 0.951 - - - acyl-Coenzyme A binding domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1930]
7. smad6b ENSDARG00000031763 12 1.865 - 1.000 0.865 - - - - - - SMAD family member 6b [Source:ZFIN;Acc:ZDB-GENE-050419-198]
8. rhobtb2b ENSDARG00000089340 4 1.863 - - 0.951 - 0.912 - - - - Rho related BTB domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-071125-1]
9. foxl2 61 1.821 - - 0.821 - - 1.000 - - - forkhead box L2, transcript variant X1
10. gria3b ENSDARG00000037498, ENSDARG00000111839 2 1.78 - - 0.951 - 0.829 - - - - glutamate receptor, ionotropic, AMPA 3b [Source:ZFIN;Acc:ZDB-GENE-030616-53]
11. si:ch211-15j21.2 si:ch211-15j21.2 13 1.765 - - 0.909 - - 0.856 - - -
12. gbp3 ENSDARG00000003244 90 1.761 0.805 0.956 - - - - - - - guanylate binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-070912-176]
13. RECK ENSDARG00000090039 15 1.714 0.805 - 0.909 - - - - - - reversion-inducing-cysteine-rich protein with kazal motifs [Source:ZFIN;Acc:ZDB-GENE-070117-37]
14. doc2d ENSDARG00000079962 76 1.652 0.805 0.847 - - - - - - - double C2-like domains, delta [Source:ZFIN;Acc:ZDB-GENE-081104-451]
15. UBAP1L UBAP1L 130 1.639 - 0.842 - - - 0.797 - - -
16. si:dkey-19n13.5 si:dkey-19n13.5 36 1.631 - 0.771 - - - 0.860 - - -
17. vetz 12 1.62 0.710 0.910 - - - - - - - vezatin, adherens junctions transmembrane protein, transcript variant X2
18. bbc3 ENSDARG00000069282 79 1.592 - 0.874 - - - 0.718 - - - BCL2 binding component 3 [Source:ZFIN;Acc:ZDB-GENE-070119-4]
19. si:ch73-167f18.3 si:ch73-167f18.3 78 1.574 - 0.823 - - - 0.751 - - -
20. rab36 ENSDARG00000014058 70 1.565 0.701 0.864 - - - - - - - RAB36, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040910-5]
21. spire2 ENSDARG00000003084 6 1.564 0.805 - - - - 0.759 - - - spire-type actin nucleation factor 2 [Source:ZFIN;Acc:ZDB-GENE-041114-29]
22. dars2 ENSDARG00000060861 137 1.535 0.808 0.727 - - - - - - - aspartyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-070912-443]
23. VPS37B ENSDARG00000039319, ENSDARG00000109293 150 1.523 - 0.711 - - - 0.812 - - - vacuolar protein sorting 37 homolog B (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060526-254]
24. ZNF800 ZNF800 72 1.504 - 0.767 - - - 0.737 - - -
25. zgc:172053 ENSDARG00000038321 9 1 - - - - - 1.000 - - - zgc:172053 [Source:ZFIN;Acc:ZDB-GENE-080219-25]
26. dlx1a ENSDARG00000013125 142 1 - 1.000 - - - - - - - distal-less homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-990415-48]
27. guca1d ENSDARG00000044629, ENSDARG00000115722 22 1 - - - - - 1.000 - - - guanylate cyclase activator 1d [Source:ZFIN;Acc:ZDB-GENE-040724-231]
28. si:ch211-188c16.1 ENSDARG00000077288 16 1 - 1.000 - - - - - - - si:ch211-188c16.1 [Source:ZFIN;Acc:ZDB-GENE-070912-162]
29. sorcs3b ENSDARG00000077349 72 1 - 1.000 - - - - - - - sortilin related VPS10 domain containing receptor 3b [Source:ZFIN;Acc:ZDB-GENE-131121-455]
30. twist1b ENSDARG00000076010 88 1 1.000 - - - - - - - - twist family bHLH transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-050417-357]
31. si:ch211-117m20.4 ENSDARG00000094286 7 1 - - - - - 1.000 - - - si:ch211-117m20.4 [Source:ZFIN;Acc:ZDB-GENE-060526-20]
32. CU694254.1 CU694254.1 4 1 - - - - - 1.000 - - -
33. il11b ENSDARG00000058557 17 1 - 1.000 - - - - - - - interleukin 11b [Source:ZFIN;Acc:ZDB-GENE-051019-2]
34. si:ch211-121k24.1 si:ch211-121k24.1 1 1 - - - - - 1.000 - - -
35. agt ENSDARG00000016412 17 1 - - - - - 1.000 - - - angiotensinogen [Source:ZFIN;Acc:ZDB-GENE-030131-1205]
36. ca4b ENSDARG00000042293 5 1 - 1.000 - - - - - - - carbonic anhydrase IV b [Source:ZFIN;Acc:ZDB-GENE-080815-5]
37. zgc:194275 ENSDARG00000074014 130 1 - - - - - 1.000 - - - zgc:194275 [Source:ZFIN;Acc:ZDB-GENE-081022-92]
38. Metazoa_SRP_13 Metazoa_SRP_13 7 1 - - - - - 1.000 - - -
39. TSPEAR TSPEAR 9 1 - 1.000 - - - - - - -
40. EBF3 EBF3 16 1 - - - - - 1.000 - - -
41. AGAP3_1 AGAP3_1 18 1 - 1.000 - - - - - - -
42. gb:am422109 gb:am422109 3 1 - 1.000 - - - - - - -
43. ipp ENSDARG00000075339 3 1 - - - - - 1.000 - - - intracisternal A particle-promoted polypeptide [Source:ZFIN;Acc:ZDB-GENE-080204-28]
44. zgc:92590 ENSDARG00000040282 13 1 - - - - - 1.000 - - - zgc:92590 [Source:ZFIN;Acc:ZDB-GENE-041024-15]
45. ZNF608 3 1 - - - - - 1.000 - - - zinc finger protein 608, transcript variant X2
46. FNDC3B FNDC3B 2 1 - - - - - 1.000 - - -
47. si:dkey-10o6.2 ENSDARG00000074628 22 1 - 1.000 - - - - - - - si:dkey-10o6.2 [Source:ZFIN;Acc:ZDB-GENE-070705-284]
48. si:ch73-285p12.4 ENSDARG00000054548 1 1 - - - - - 1.000 - - - si:ch73-285p12.4 [Source:ZFIN;Acc:ZDB-GENE-110411-145]
49. sox32 ENSDARG00000100591 2 1 - - - - - 1.000 - - - SRY (sex determining region Y)-box 32 [Source:ZFIN;Acc:ZDB-GENE-011026-1]
50. si:dkey-104n9.1 ENSDARG00000093042 41 1 - - - - - 1.000 - - - si:dkey-104n9.1 [Source:ZFIN;Acc:ZDB-GENE-081104-300]
51. trpm3 ENSDARG00000039181 2 1 - - - - - 1.000 - - - transient receptor potential cation channel, subfamily M, member 3 [Source:ZFIN;Acc:ZDB-GENE-060531-95]
52. slc38a3a ENSDARG00000027065, ENSDARG00000112018 95 1 - - - - - 1.000 - - - solute carrier family 38, member 3a [Source:ZFIN;Acc:ZDB-GENE-070615-25]
53. anxa2b ENSDARG00000053625, ENSDARG00000116775, ENSDARG00000117092 55 1 - 1.000 - - - - - - - annexin A2b [Source:ZFIN;Acc:ZDB-GENE-030131-1089]
54. CABZ01076533.1 CABZ01076533.1 2 1 - 1.000 - - - - - - -
55. CABZ01083834.1 CABZ01083834.1 38 1 - 1.000 - - - - - - -
56. CR631122.1 ENSDARG00000044534 8 1 - - - - - 1.000 - - - protein RD3-like [Source:NCBI gene;Acc:100149591]
57. si:dkey-26g8.11 si:dkey-26g8.11 4 1 - - - - - 1.000 - - -
58. skila ENSDARG00000023933 2 1 - 1.000 - - - - - - - SKI-like proto-oncogene a [Source:ZFIN;Acc:ZDB-GENE-070912-548]
59. CR788231.1 CR788231.1 61 1 1.000 - - - - - - - -
60. U8_1 U8_1 2 1 - - - - - 1.000 - - -
61. KCNB1 ENSDARG00000060095, ENSDARG00000112775 5 1 - - - - - 1.000 - - - potassium voltage-gated channel, Shab-related subfamily, member 1 [Source:ZFIN;Acc:ZDB-GENE-090831-3]
62. slc7a1 ENSDARG00000016439, ENSDARG00000115084 32 1 - - - - - 1.000 - - - solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 [Source:ZFIN;Acc:ZDB-GENE-091116-69]
63. si:ch211-51n3.1 si:ch211-51n3.1 26 1 - 1.000 - - - - - - -
64. kcnq1 ENSDARG00000059798 11 1 - - - - - 1.000 - - - potassium voltage-gated channel, KQT-like subfamily, member 1 [Source:ZFIN;Acc:ZDB-GENE-061214-5]
65. si:dkeyp-15f12.4 si:dkeyp-15f12.4 2 1 - 1.000 - - - - - - -
66. prom1b ENSDARG00000034007, ENSDARG00000111216, ENSDARG00000111262 14 1 - - - - - 1.000 - - - prominin 1 b [Source:ZFIN;Acc:ZDB-GENE-031003-1]
67. si:dkey-231k6.6 si:dkey-231k6.6 2 1 - - - - - 1.000 - - -
68. irx4a ENSDARG00000035648 71 1 - - - - - 1.000 - - - iroquois homeobox 4a [Source:ZFIN;Acc:ZDB-GENE-040426-1825]
69. DEF6 DEF6 19 1 - 1.000 - - - - - - -
70. CABZ01049362.1 ENSDARG00000099508 570 1 - - - - - 1.000 - - -
71. CU062628.1 ENSDARG00000090267 3 1 - - - - - 1.000 - - - trypsin-2-like [Source:NCBI gene;Acc:103908930]
72. zgc:171490 ENSDARG00000071643 4 1 - - - - - 1.000 - - - zgc:171490 [Source:ZFIN;Acc:ZDB-GENE-080204-29]
73. apnl ENSDARG00000090900 21 1 - - - - - 1.000 - - - actinoporin-like protein [Source:ZFIN;Acc:ZDB-GENE-030131-8907]
74. GPR20 ENSDARG00000077427 1 1 - - - - - 1.000 - - - G protein-coupled receptor 20 [Source:ZFIN;Acc:ZDB-GENE-140106-136]
75. si:ch211-76l23.4 ENSDARG00000096242 202 1 - 1.000 - - - - - - - si:ch211-76l23.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8310]
76. CABZ01033205.2 CABZ01033205.2 5 1 - - - - - 1.000 - - -
77. CABZ01081747.2 CABZ01081747.2 9 1 - - - - - 1.000 - - -
78. SLC22A13 SLC22A13 1 1 - - - - - 1.000 - - -
79. gdf6b ENSDARG00000005510 106 1 - - - - - 1.000 - - - growth differentiation factor 6b [Source:ZFIN;Acc:ZDB-GENE-980526-442]
80. APOBEC2 APOBEC2 9 1 - - - - - 1.000 - - -
81. adal ENSDARG00000012986, ENSDARG00000111306 77 1 1.000 - - - - - - - - adenosine deaminase-like [Source:ZFIN;Acc:ZDB-GENE-050913-145]
82. BX510909.1 ENSDARG00000104294 5 1 - 1.000 - - - - - - -
83. sema4aa ENSDARG00000077103 4 1 - - - - - 1.000 - - - sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4Aa [Source:ZFIN;Acc:ZDB-GENE-110411-86]
84. ighz ENSDARG00000096280 2 1 - 1.000 - - - - - - - immunoglobulin heavy constant zeta [Source:ZFIN;Acc:ZDB-GENE-040513-8]
85. rprmb ENSDARG00000024006 120 1 - - - - - 1.000 - - - reprimo, TP53 dependent G2 arrest mediator candidate b [Source:ZFIN;Acc:ZDB-GENE-040426-1779]
86. runx2b ENSDARG00000059233 106 1 - 1.000 - - - - - - - runt-related transcription factor 2b [Source:ZFIN;Acc:ZDB-GENE-040629-4]
87. SNAPC2 ENSDARG00000036473 158 1 - 1.000 - - - - - - - small nuclear RNA activating complex, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-120328-2]
88. nr1h4 ENSDARG00000057741, ENSDARG00000113600 24 1 - 1.000 - - - - - - - nuclear receptor subfamily 1, group H, member 4 [Source:ZFIN;Acc:ZDB-GENE-040718-313]
89. si:rp71-31c2.1 si:rp71-31c2.1 1 1 - - - - - 1.000 - - -
90. f9b ENSDARG00000029493, ENSDARG00000111567 119 1 - 1.000 - - - - - - - coagulation factor IXb [Source:ZFIN;Acc:ZDB-GENE-060421-7346]
91. si:dkey-208k4.7 si:dkey-208k4.7 14 1 - - - - - 1.000 - - -
92. si:ch211-238g23.1 ENSDARG00000055746 23 1 - - - - - 1.000 - - - si:ch211-238g23.1 [Source:ZFIN;Acc:ZDB-GENE-050420-173]
93. si:ch211-286b5.2 ENSDARG00000096514 6 1 - - - - - 1.000 - - - si:ch211-286b5.2 [Source:ZFIN;Acc:ZDB-GENE-121214-251]
94. wnt8b ENSDARG00000006911 98 1 - 1.000 - - - - - - - wingless-type MMTV integration site family, member 8b [Source:ZFIN;Acc:ZDB-GENE-990415-279]
95. BX927349.1 ENSDARG00000097041 1 1 - - - - - 1.000 - - - si:dkey-84k15.7 [Source:NCBI gene;Acc:103909075]
96. GPR78 GPR78 17 1 - - - - - 1.000 - - -
97. camk1ga ENSDARG00000044526 5 1 - 1.000 - - - - - - - calcium/calmodulin-dependent protein kinase IGa [Source:ZFIN;Acc:ZDB-GENE-030131-7594]
98. f8 ENSDARG00000101385 1 1 - - - - - 1.000 - - - coagulation factor VIII, procoagulant component [Source:ZFIN;Acc:ZDB-GENE-090629-2]
99. si:dkey-11c5.14 si:dkey-11c5.14 15 1 1.000 - - - - - - - -
100. hsd3b1 ENSDARG00000069926 35 1 - - - - - 1.000 - - - hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1 [Source:ZFIN;Acc:ZDB-GENE-081105-30]

There are 931 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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