Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for pdgfra

Gene Name Gene ID Reads Annotation
pdgfra ENSDARG00000070494, ENSDARG00000113952 6 platelet-derived growth factor receptor, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-208]










Genes with expression patterns similar to pdgfra

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pdgfra ENSDARG00000070494, ENSDARG00000113952 6 5 1.000 1.000 1.000 - 1.000 1.000 - - - platelet-derived growth factor receptor, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-208]
2. si:ch211-196n4.5 si:ch211-196n4.5 63 1.978 - 0.978 - - - 1.000 - - -
3. acoxl ENSDARG00000020149 14 1.909 - 1.000 0.909 - - - - - - acyl-CoA oxidase-like [Source:ZFIN;Acc:ZDB-GENE-081107-18]
4. si:ch211-155d24.7 si:ch211-155d24.7 17 1.909 - - 0.909 - - 1.000 - - -
5. TECPR1 TECPR1 173 1.907 1.000 0.907 - - - - - - -
6. ACBD3 ENSDARG00000042623 159 1.89 - 0.939 - - - 0.951 - - - acyl-Coenzyme A binding domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1930]
7. smad6b ENSDARG00000031763 12 1.865 - 1.000 0.865 - - - - - - SMAD family member 6b [Source:ZFIN;Acc:ZDB-GENE-050419-198]
8. rhobtb2b ENSDARG00000089340 4 1.863 - - 0.951 - 0.912 - - - - Rho related BTB domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-071125-1]
9. foxl2 61 1.821 - - 0.821 - - 1.000 - - - forkhead box L2, transcript variant X1
10. gria3b ENSDARG00000037498, ENSDARG00000111839 2 1.78 - - 0.951 - 0.829 - - - - glutamate receptor, ionotropic, AMPA 3b [Source:ZFIN;Acc:ZDB-GENE-030616-53]
11. si:ch211-15j21.2 si:ch211-15j21.2 13 1.765 - - 0.909 - - 0.856 - - -
12. gbp3 ENSDARG00000003244 90 1.761 0.805 0.956 - - - - - - - guanylate binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-070912-176]
13. RECK ENSDARG00000090039 15 1.714 0.805 - 0.909 - - - - - - reversion-inducing-cysteine-rich protein with kazal motifs [Source:ZFIN;Acc:ZDB-GENE-070117-37]
14. doc2d ENSDARG00000079962 76 1.652 0.805 0.847 - - - - - - - double C2-like domains, delta [Source:ZFIN;Acc:ZDB-GENE-081104-451]
15. UBAP1L UBAP1L 130 1.639 - 0.842 - - - 0.797 - - -
16. si:dkey-19n13.5 si:dkey-19n13.5 36 1.631 - 0.771 - - - 0.860 - - -
17. vetz 12 1.62 0.710 0.910 - - - - - - - vezatin, adherens junctions transmembrane protein, transcript variant X2
18. bbc3 ENSDARG00000069282 79 1.592 - 0.874 - - - 0.718 - - - BCL2 binding component 3 [Source:ZFIN;Acc:ZDB-GENE-070119-4]
19. si:ch73-167f18.3 si:ch73-167f18.3 78 1.574 - 0.823 - - - 0.751 - - -
20. rab36 ENSDARG00000014058 70 1.565 0.701 0.864 - - - - - - - RAB36, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040910-5]
21. spire2 ENSDARG00000003084 6 1.564 0.805 - - - - 0.759 - - - spire-type actin nucleation factor 2 [Source:ZFIN;Acc:ZDB-GENE-041114-29]
22. dars2 ENSDARG00000060861 137 1.535 0.808 0.727 - - - - - - - aspartyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-070912-443]
23. VPS37B ENSDARG00000039319, ENSDARG00000109293 150 1.523 - 0.711 - - - 0.812 - - - vacuolar protein sorting 37 homolog B (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060526-254]
24. ZNF800 ZNF800 72 1.504 - 0.767 - - - 0.737 - - -
25. CU457819.3 ENSDARG00000105418 23 1 - - - - - 1.000 - - - Histone H3.2 [Source:UniProtKB/Swiss-Prot;Acc:Q4QRF4]
26. si:dkey-256i11.4 si:dkey-256i11.4 3 1 - - - - - 1.000 - - -
27. SLC22A13 SLC22A13 1 1 - - - - - 1.000 - - -
28. fut7 ENSDARG00000044775 25 1 - - - - - 1.000 - - - fucosyltransferase 7 (alpha (1,3) fucosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-060929-997]
29. si:rp71-1c10.7 si:rp71-1c10.7 3 1 - 1.000 - - - - - - -
30. nr1h4 ENSDARG00000057741, ENSDARG00000113600 24 1 - 1.000 - - - - - - - nuclear receptor subfamily 1, group H, member 4 [Source:ZFIN;Acc:ZDB-GENE-040718-313]
31. dre-mir-2189 ENSDARG00000098723 9 1 - - - - - 1.000 - - - dre-mir-2189 [Source:miRBase;Acc:MI0010851]
32. s1pr5b ENSDARG00000052192 52 1 - - - - - 1.000 - - - sphingosine-1-phosphate receptor 5b [Source:ZFIN;Acc:ZDB-GENE-061201-27]
33. si:ch211-281p14.2 22 1 1.000 - - - - - - - - si:ch211-281p14.2, transcript variant X2
34. KCNB1 ENSDARG00000060095, ENSDARG00000112775 5 1 - - - - - 1.000 - - - potassium voltage-gated channel, Shab-related subfamily, member 1 [Source:ZFIN;Acc:ZDB-GENE-090831-3]
35. CACNA1H CACNA1H 34 1 - 1.000 - - - - - - -
36. CHCHD5 ENSDARG00000091754 35 1 - - - - - 1.000 - - - coiled-coil-helix-coiled-coil-helix domain containing 5 [Source:HGNC Symbol;Acc:HGNC:17840]
37. CU062628.1 ENSDARG00000090267 3 1 - - - - - 1.000 - - - trypsin-2-like [Source:NCBI gene;Acc:103908930]
38. CABZ01049362.1 ENSDARG00000099508 570 1 - - - - - 1.000 - - -
39. si:dkey-11c5.14 si:dkey-11c5.14 15 1 1.000 - - - - - - - -
40. GPR78 GPR78 17 1 - - - - - 1.000 - - -
41. ipp ENSDARG00000075339 3 1 - - - - - 1.000 - - - intracisternal A particle-promoted polypeptide [Source:ZFIN;Acc:ZDB-GENE-080204-28]
42. si:ch211-117m20.4 ENSDARG00000094286 7 1 - - - - - 1.000 - - - si:ch211-117m20.4 [Source:ZFIN;Acc:ZDB-GENE-060526-20]
43. dlx1a ENSDARG00000013125 142 1 - 1.000 - - - - - - - distal-less homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-990415-48]
44. U8_1 U8_1 2 1 - - - - - 1.000 - - -
45. ME1 ENSDARG00000053215 8 1 - - - - - 1.000 - - - malic enzyme 1, NADP(+)-dependent, cytosolic [Source:ZFIN;Acc:ZDB-GENE-061013-438]
46. CR788231.1 CR788231.1 61 1 1.000 - - - - - - - -
47. eif4e1b ENSDARG00000014565 12 1 - - - - - 1.000 - - - eukaryotic translation initiation factor 4E family member 1B [Source:ZFIN;Acc:ZDB-GENE-980526-127]
48. fopnl ENSDARG00000071198 1002 1 - 1.000 - - - - - - - fgfr1op N-terminal like [Source:ZFIN;Acc:ZDB-GENE-101124-1]
49. si:ch211-121k24.1 si:ch211-121k24.1 1 1 - - - - - 1.000 - - -
50. fam19a1 7 1 - - - - - 1.000 - - - family with sequence similarity 19 member A1, C-C motif chemokine like, transcript variant X5
51. runx2b ENSDARG00000059233 106 1 - 1.000 - - - - - - - runt-related transcription factor 2b [Source:ZFIN;Acc:ZDB-GENE-040629-4]
52. si:dkey-208k4.7 si:dkey-208k4.7 14 1 - - - - - 1.000 - - -
53. CABZ01083834.1 CABZ01083834.1 38 1 - 1.000 - - - - - - -
54. HIST1H2BA_1 ENSDARG00000116654 37 1 - 1.000 - - - - - - - histone cluster 1 H2B family member a [Source:HGNC Symbol;Acc:HGNC:18730]
55. DEF6 DEF6 19 1 - 1.000 - - - - - - -
56. MAL2_1 MAL2_1 6 1 - 1.000 - - - - - - -
57. or111-4 ENSDARG00000088846 1 1 - - - - - 1.000 - - - odorant receptor, family D, subfamily 111, member 4 [Source:ZFIN;Acc:ZDB-GENE-010308-16]
58. anxa2b ENSDARG00000053625, ENSDARG00000116775, ENSDARG00000117092 55 1 - 1.000 - - - - - - - annexin A2b [Source:ZFIN;Acc:ZDB-GENE-030131-1089]
59. CABZ01071177.1 CABZ01071177.1 1 1 - - - - - 1.000 - - -
60. TSPEAR TSPEAR 9 1 - 1.000 - - - - - - -
61. CABZ01033205.2 CABZ01033205.2 5 1 - - - - - 1.000 - - -
62. slc38a3a ENSDARG00000027065, ENSDARG00000112018 95 1 - - - - - 1.000 - - - solute carrier family 38, member 3a [Source:ZFIN;Acc:ZDB-GENE-070615-25]
63. si:dkey-85k7.12 ENSDARG00000078731 3 1 - - - - - 1.000 - - - si:dkey-85k7.12 [Source:ZFIN;Acc:ZDB-GENE-130530-855]
64. adal ENSDARG00000012986, ENSDARG00000111306 77 1 1.000 - - - - - - - - adenosine deaminase-like [Source:ZFIN;Acc:ZDB-GENE-050913-145]
65. soul5l ENSDARG00000089879 20 1 - - - - - 1.000 - - - heme-binding protein soul5, like [Source:ZFIN;Acc:ZDB-GENE-121214-315]
66. gphb5 ENSDARG00000027472 8 1 - - - - - 1.000 - - - glycoprotein hormone beta 5 [Source:ZFIN;Acc:ZDB-GENE-090319-4]
67. CABZ01081747.2 CABZ01081747.2 9 1 - - - - - 1.000 - - -
68. apnl ENSDARG00000090900 21 1 - - - - - 1.000 - - - actinoporin-like protein [Source:ZFIN;Acc:ZDB-GENE-030131-8907]
69. CABZ01016604.1 CABZ01016604.1 12 1 - - - - - 1.000 - - -
70. CABZ01100187.1 CABZ01100187.1 191 1 - 1.000 - - - - - - -
71. C7H10orf112 C7H10orf112 15 1 - - - - - 1.000 - - -
72. si:ch211-209l18.5 si:ch211-209l18.5 1 1 - - - - - 1.000 - - -
73. casd1 ENSDARG00000023900 12 1 - - - - - 1.000 - - - CAS1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060503-329]
74. si:ch211-250m6.4 ENSDARG00000068869, ENSDARG00000116106 1 1 - - - - - 1.000 - - - si:ch211-250m6.4 [Source:ZFIN;Acc:ZDB-GENE-061009-21]
75. CABZ01057928.1 ENSDARG00000115082 1 1 - - - - - 1.000 - - - protein diaphanous homolog 1-like [Source:NCBI gene;Acc:101882228]
76. RNASEH2C_1 RNASEH2C_1 10 1 - 1.000 - - - - - - -
77. LRFN2_1 LRFN2_1 17 1 - 1.000 - - - - - - -
78. CU694952.2 CU694952.2 3 1 - - - - - 1.000 - - -
79. ZNF70_9 ZNF70_9 1 1 - - - - - 1.000 - - -
80. BX119910.9 BX119910.9 7 1 - - - - - 1.000 - - -
81. slc46a3 ENSDARG00000077313 14 1 - 1.000 - - - - - - - solute carrier family 46, member 3 [Source:ZFIN;Acc:ZDB-GENE-100105-2]
82. cx41.8 cx41.8 7 1 - - - - - 1.000 - - -
83. si:dkey-231k6.6 si:dkey-231k6.6 2 1 - - - - - 1.000 - - -
84. camk1ga ENSDARG00000044526 5 1 - 1.000 - - - - - - - calcium/calmodulin-dependent protein kinase IGa [Source:ZFIN;Acc:ZDB-GENE-030131-7594]
85. SNAPC2 ENSDARG00000036473 158 1 - 1.000 - - - - - - - small nuclear RNA activating complex, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-120328-2]
86. wdr21 ENSDARG00000003197, ENSDARG00000110654 4 1 - - - - - 1.000 - - - WD repeat domain 21 [Source:ZFIN;Acc:ZDB-GENE-040109-2]
87. ADAMTS15_1 ADAMTS15_1 11 1 - - - - - 1.000 - - -
88. slc7a1 ENSDARG00000016439, ENSDARG00000115084 32 1 - - - - - 1.000 - - - solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 [Source:ZFIN;Acc:ZDB-GENE-091116-69]
89. si:dkey-24p1.6 ENSDARG00000028784, ENSDARG00000097212 23 1 - - - - - 1.000 - - - si:dkey-24p1.6 [Source:ZFIN;Acc:ZDB-GENE-060503-67]
90. agt ENSDARG00000016412 17 1 - - - - - 1.000 - - - angiotensinogen [Source:ZFIN;Acc:ZDB-GENE-030131-1205]
91. si:ch211-286b5.2 ENSDARG00000096514 6 1 - - - - - 1.000 - - - si:ch211-286b5.2 [Source:ZFIN;Acc:ZDB-GENE-121214-251]
92. sox32 ENSDARG00000100591 2 1 - - - - - 1.000 - - - SRY (sex determining region Y)-box 32 [Source:ZFIN;Acc:ZDB-GENE-011026-1]
93. nphs2 ENSDARG00000042850 31 1 - 1.000 - - - - - - - nephrosis 2, idiopathic, steroid-resistant (podocin) [Source:ZFIN;Acc:ZDB-GENE-051102-2]
94. si:busm1-160c18.1 si:busm1-160c18.1 1 1 - - - - - 1.000 - - -
95. cnga4 ENSDARG00000069383 6 1 - - - - - 1.000 - - - cyclic nucleotide gated channel alpha 4 [Source:ZFIN;Acc:ZDB-GENE-070912-292]
96. EGR4 ENSDARG00000077799 34 1 - 1.000 - - - - - - - early growth response 4 [Source:ZFIN;Acc:ZDB-GENE-080204-90]
97. BX510909.1 ENSDARG00000104294 5 1 - 1.000 - - - - - - -
98. wnt8b ENSDARG00000006911 98 1 - 1.000 - - - - - - - wingless-type MMTV integration site family, member 8b [Source:ZFIN;Acc:ZDB-GENE-990415-279]
99. GPR45 ENSDARG00000063357 57 1 1.000 - - - - - - - - G protein-coupled receptor 45 [Source:HGNC Symbol;Acc:HGNC:4503]
100. inppl1b ENSDARG00000001442 41 1 - 1.000 - - - - - - - inositol polyphosphate phosphatase-like 1b [Source:ZFIN;Acc:ZDB-GENE-030616-75]

There are 931 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA