Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for pdgfab

Gene Name Gene ID Reads Annotation
pdgfab ENSDARG00000098578, ENSDARG00000109732 718 platelet-derived growth factor alpha polypeptide b [Source:ZFIN;Acc:ZDB-GENE-060929-124]










Genes with expression patterns similar to pdgfab

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pdgfab ENSDARG00000098578, ENSDARG00000109732 718 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 platelet-derived growth factor alpha polypeptide b [Source:ZFIN;Acc:ZDB-GENE-060929-124]
2. angptl5 ENSDARG00000056630 203 1.649 - - - - - 0.829 - 0.820 - angiopoietin-like 5 [Source:ZFIN;Acc:ZDB-GENE-030131-5054]
3. lama4 ENSDARG00000020785 1522 1.581 - 0.742 - - - - 0.839 - - laminin, alpha 4 [Source:ZFIN;Acc:ZDB-GENE-040724-213]
4. apooa ENSDARG00000104696 665 1.574 - 0.807 - - - - - 0.767 - apolipoprotein O, a [Source:ZFIN;Acc:ZDB-GENE-031118-91]
5. TNS1 TNS1 628 1.567 - - - - - 0.723 0.844 - -
6. srpk3 ENSDARG00000005916 1546 1.559 - 0.742 - - - - 0.817 - - SRSF protein kinase 3 [Source:ZFIN;Acc:ZDB-GENE-101025-2]
7. MYOM1 MYOM1 3870 1.557 - 0.713 - - - - 0.844 - -
8. sar1ab ENSDARG00000033320 3984 1.552 0.750 - - - - - 0.802 - - secretion associated, Ras related GTPase 1Ab [Source:ZFIN;Acc:ZDB-GENE-050417-437]
9. snai1b ENSDARG00000046019 886 1.549 - 0.718 - - - 0.831 - - - snail family zinc finger 1b [Source:ZFIN;Acc:ZDB-GENE-980526-514]
10. cmya5 ENSDARG00000061379 1423 1.544 - 0.735 - - - - 0.809 - - cardiomyopathy associated 5 [Source:ZFIN;Acc:ZDB-GENE-070630-1]
11. gnav1 ENSDARG00000043006 305 1.542 - 0.770 - - - 0.772 - - - guanine nucleotide binding protein (G protein) alpha v1 [Source:ZFIN;Acc:ZDB-GENE-081031-92]
12. zgc:174697 zgc:174697 128 1.534 - - - - - 0.723 - 0.811 -
13. meox1 ENSDARG00000007891, ENSDARG00000115382 1584 1.532 - 0.798 - - - - 0.734 - - mesenchyme homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040718-149]
14. mef2cb ENSDARG00000009418 1124 1.531 - 0.764 - - - - 0.767 - - myocyte enhancer factor 2cb [Source:ZFIN;Acc:ZDB-GENE-040901-7]
15. zbtb2b ENSDARG00000028086, ENSDARG00000110834 1609 1.53 - 0.737 - - - 0.793 - - - zinc finger and BTB domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-040426-2753]
16. vwde ENSDARG00000103443 5758 1.529 - 0.723 - - - - 0.806 - - von Willebrand factor D and EGF domains [Source:ZFIN;Acc:ZDB-GENE-060929-1226]
17. fanci ENSDARG00000026224 415 1.527 0.702 - - - - - - 0.825 - FA complementation group I [Source:ZFIN;Acc:ZDB-GENE-030131-2905]
18. cacna1sa ENSDARG00000029457 883 1.526 - - - - - 0.740 0.786 - - calcium channel, voltage-dependent, L type, alpha 1S subunit, a [Source:ZFIN;Acc:ZDB-GENE-090514-1]
19. CCDC137 ENSDARG00000104024, ENSDARG00000110733 1855 1.525 - 0.777 - - - - 0.748 - - coiled-coil domain containing 137 [Source:ZFIN;Acc:ZDB-GENE-060929-1206]
20. lmx1ba ENSDARG00000104815 376 1.521 - 0.782 - - - 0.739 - - - LIM homeobox transcription factor 1, beta a [Source:ZFIN;Acc:ZDB-GENE-050114-3]
21. SPEG SPEG 4017 1.517 0.733 - - - - - 0.784 - -
22. snx29 ENSDARG00000077317 239 1.515 - - - - - 0.740 - 0.775 - sorting nexin 29 [Source:ZFIN;Acc:ZDB-GENE-121105-13]
23. palm1a ENSDARG00000026882, ENSDARG00000115356 3425 1.513 - 0.719 - - - - 0.794 - - paralemmin 1a [Source:ZFIN;Acc:ZDB-GENE-050417-409]
24. alpk3a ENSDARG00000078989 1992 1.51 - 0.738 - - - - 0.772 - - alpha-kinase 3a [Source:ZFIN;Acc:ZDB-GENE-050419-48]
25. LYRM7 ENSDARG00000079815, ENSDARG00000111617, ENSDARG00000114632 2283 1.508 - 0.769 - - - - 0.739 - - LYR motif containing 7 [Source:ZFIN;Acc:ZDB-GENE-070615-32]
26. BX005368.2 BX005368.2 702 1.505 - - - - - 0.732 0.773 - -
27. CABZ01097761.1 ENSDARG00000116119 445 1.498 - 0.724 - - - - 0.774 - - dual specificity protein phosphatase 13-like [Source:NCBI gene;Acc:100537679]
28. chrnb1 ENSDARG00000069660, ENSDARG00000112115, ENSDARG00000113395 1438 1.497 0.750 - - - - - 0.747 - - cholinergic receptor, nicotinic, beta 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-070821-4]
29. fxr2 ENSDARG00000016260, ENSDARG00000116730 10030 1.484 0.718 - - - - - 0.766 - - fragile X mental retardation, autosomal homolog 2 [Source:ZFIN;Acc:ZDB-GENE-040426-943]
30. znf648 ENSDARG00000104823 1918 1.478 - 0.708 - - - - 0.770 - - zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
31. eya1 ENSDARG00000014259, ENSDARG00000116267 5111 1.472 0.745 - - - - - 0.727 - - EYA transcriptional coactivator and phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-990712-18]
32. BUD13 BUD13 594 1.47 - 0.744 - 0.726 - - - - -
33. gbgt1l4 ENSDARG00000068503 1009 1.46 - - - 0.744 - - - 0.716 - globoside alpha-1,3-N-acetylgalactosaminyltransferase 1, like 4 [Source:ZFIN;Acc:ZDB-GENE-031204-4]
34. BX664721.5 BX664721.5 462 1.46 - - - - - 0.746 0.714 - -
35. asns ENSDARG00000016375 1606 1.454 - 0.701 - - - - 0.753 - - asparagine synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-1091]
36. mpzl1l ENSDARG00000059048 571 1.453 - - - - - - 0.726 0.727 - myelin protein zero-like 1 like [Source:ZFIN;Acc:ZDB-GENE-050417-455]
37. mrps27 ENSDARG00000059234 802 1.453 - - - - - - 0.717 0.736 - mitochondrial ribosomal protein S27 [Source:ZFIN;Acc:ZDB-GENE-040808-39]
38. xirp2a ENSDARG00000071113 7113 1.449 - 0.703 - - - - 0.746 - - xin actin binding repeat containing 2a [Source:ZFIN;Acc:ZDB-GENE-040108-7]
39. C1H10orf12 C1H10orf12 1663 1.449 - 0.730 - - - 0.719 - - -
40. chchd6b ENSDARG00000045978 251 1.447 0.704 0.743 - - - - - - - coiled-coil-helix-coiled-coil-helix domain containing 6b [Source:ZFIN;Acc:ZDB-GENE-041114-95]
41. tsku ENSDARG00000040815 631 1.436 - - - 0.702 - - - 0.734 - tsukushi small leucine rich proteoglycan homolog (Xenopus laevis) [Source:ZFIN;Acc:ZDB-GENE-030131-4683]
42. zgc:153662 zgc:153662 4604 1.431 - 0.718 - - - - 0.713 - -
43. akap6 ENSDARG00000077295 1382 1.422 - - - - - 0.707 0.715 - - A kinase (PRKA) anchor protein 6 [Source:ZFIN;Acc:ZDB-GENE-120207-2]
44. clcn5 clcn5 492 0.94 - - - - - - - 0.940 -
45. cyp3c4 ENSDARG00000070021 95 0.927 - - - - - - - 0.927 - cytochrome P450, family 3, subfamily C, polypeptide 4 [Source:ZFIN;Acc:ZDB-GENE-060929-96]
46. RIBC2 ENSDARG00000075177 445 0.915 - - - - - - - 0.915 - RIB43A domain with coiled-coils 2 [Source:ZFIN;Acc:ZDB-GENE-050411-27]
47. FAM83G ENSDARG00000062929 1142 0.894 - - - - - - - 0.894 - family with sequence similarity 83 member G [Source:HGNC Symbol;Acc:HGNC:32554]
48. slc27a4 ENSDARG00000017047, ENSDARG00000113602 811 0.889 - - - - - - - 0.889 - solute carrier family 27 (fatty acid transporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-050417-248]
49. zfpl1 ENSDARG00000103453 860 0.882 - - - - - - - 0.882 - zinc finger protein-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1255]
50. akap11 ENSDARG00000075435 654 0.881 - - - - - - - 0.881 - A kinase (PRKA) anchor protein 11 [Source:ZFIN;Acc:ZDB-GENE-090804-1]
51. MUSTN1 MUSTN1 1882 0.876 - - - - - - 0.876 - -
52. slc2a15b ENSDARG00000053269 899 0.876 - - - - - - 0.876 - - solute carrier family 2 (facilitated glucose transporter), member 15b [Source:ZFIN;Acc:ZDB-GENE-050508-1]
53. prickle2 prickle2 483 0.874 - 0.874 - - - - - - -
54. C25H12orf73 C25H12orf73 2031 0.873 - - - - - - 0.873 - -
55. PCBP4 ENSDARG00000024276 3194 0.864 - 0.864 - - - - - - - poly(rC) binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2122]
56. rbfox1l ENSDARG00000021184, ENSDARG00000111700 26249 0.863 - - - - - - 0.863 - - RNA binding fox-1 homolog 1, like [Source:ZFIN;Acc:ZDB-GENE-040923-2]
57. rp42-pen rp42-pen 3395 0.862 - - - - - - 0.862 - -
58. lrig1 ENSDARG00000075625 2027 0.858 - - - - - - 0.858 - - leucine-rich repeats and immunoglobulin-like domains 1 [Source:ZFIN;Acc:ZDB-GENE-031113-23]
59. mapkapk3 ENSDARG00000111612 370 0.856 - - - - - - 0.856 - - mitogen-activated protein kinase-activated protein kinase 3 [Source:ZFIN;Acc:ZDB-GENE-061215-124]
60. ldb3a ENSDARG00000056322, ENSDARG00000116388 2569 0.855 - - - - - - 0.855 - - LIM domain binding 3a [Source:ZFIN;Acc:ZDB-GENE-040121-6]
61. zgc:158296 ENSDARG00000070923 3935 0.855 - - - - - - 0.855 - - zgc:158296 [Source:ZFIN;Acc:ZDB-GENE-070112-1272]
62. C13H10orf71 3489 0.853 - - - - - - 0.853 - - chromosome 13 C10orf71 homolog
63. serpinf1 ENSDARG00000069048 2083 0.852 - - - - - - 0.852 - - serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 1 [Source:ZFIN;Acc:ZDB-GENE-040912-2]
64. nploc4 ENSDARG00000100487 1262 0.851 - - - - - - 0.851 - - NPL4 homolog, ubiquitin recognition factor [Source:ZFIN;Acc:ZDB-GENE-030131-5658]
65. eno1a ENSDARG00000022456, ENSDARG00000116458 14401 0.851 - - - - - - 0.851 - - enolase 1a, (alpha) [Source:ZFIN;Acc:ZDB-GENE-030131-6048]
66. myof ENSDARG00000006112 618 0.85 - - - - - - - 0.850 - myoferlin [Source:ZFIN;Acc:ZDB-GENE-040426-1138]
67. mdh1b ENSDARG00000018008 3196 0.85 - - - - - - 0.850 - - malate dehydrogenase 1B, NAD (soluble) [Source:ZFIN;Acc:ZDB-GENE-060929-384]
68. klhl41b ENSDARG00000006757 10762 0.849 - - - - - - 0.849 - - kelch-like family member 41b [Source:ZFIN;Acc:ZDB-GENE-030131-9875]
69. ftsj1 ENSDARG00000057089, ENSDARG00000112096 551 0.849 - - - - - 0.849 - - - FtsJ RNA methyltransferase homolog 1 [Source:ZFIN;Acc:ZDB-GENE-041114-83]
70. msrb3 ENSDARG00000045658 988 0.846 - - - - - - 0.846 - - methionine sulfoxide reductase B3 [Source:ZFIN;Acc:ZDB-GENE-040625-74]
71. sos2 ENSDARG00000060506 769 0.846 - - - - - 0.846 - - - son of sevenless homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-090319-5]
72. mybphb ENSDARG00000003081 5208 0.846 - - - - - - 0.846 - - myosin binding protein Hb [Source:ZFIN;Acc:ZDB-GENE-030131-9794]
73. iars2 ENSDARG00000044134 1990 0.845 - 0.845 - - - - - - - isoleucyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030616-608]
74. tspan12 ENSDARG00000032389 419 0.843 - - - - - - 0.843 - - tetraspanin 12 [Source:ZFIN;Acc:ZDB-GENE-040426-1285]
75. tnnt2e ENSDARG00000045822, ENSDARG00000109924 3288 0.843 - - - - - - 0.843 - - troponin T2e, cardiac [Source:ZFIN;Acc:ZDB-GENE-041210-27]
76. YRDC ENSDARG00000041428 221 0.843 - - - - - - 0.843 - - yrdC N(6)-threonylcarbamoyltransferase domain containing [Source:ZFIN;Acc:ZDB-GENE-070410-65]
77. BX294434.1 ENSDARG00000061272 6493 0.843 - - - - - - 0.843 - - solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
78. smyd1a ENSDARG00000009280 1503 0.842 - - - - - - 0.842 - - SET and MYND domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9825]
79. ing5a ENSDARG00000022413 268 0.842 - - - - - - - 0.842 - inhibitor of growth family, member 5a [Source:ZFIN;Acc:ZDB-GENE-031016-1]
80. sptb ENSDARG00000030490 7128 0.84 - - - - - - 0.840 - - spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
81. tomm34 ENSDARG00000001557 1874 0.839 - - - - - - 0.839 - - translocase of outer mitochondrial membrane 34 [Source:ZFIN;Acc:ZDB-GENE-030131-2081]
82. TENC1 TENC1 1729 0.839 - - - - - - 0.839 - -
83. enpp1 ENSDARG00000005789 3267 0.839 - - - - - - 0.839 - - ectonucleotide pyrophosphatase/phosphodiesterase 1 [Source:ZFIN;Acc:ZDB-GENE-040724-172]
84. tbrg4 ENSDARG00000074807 674 0.838 - 0.838 - - - - - - - transforming growth factor beta regulator 4 [Source:ZFIN;Acc:ZDB-GENE-091020-8]
85. sh3bgr ENSDARG00000021633 3498 0.837 - - - - - - 0.837 - - SH3 domain binding glutamate-rich protein [Source:ZFIN;Acc:ZDB-GENE-040801-27]
86. si:ch211-113e8.9 ENSDARG00000095065 33 0.837 - - - - - - 0.837 - - si:ch211-113e8.9 [Source:ZFIN;Acc:ZDB-GENE-090313-14]
87. trim55a ENSDARG00000029596 2858 0.837 - - - - - - 0.837 - - tripartite motif containing 55a [Source:ZFIN;Acc:ZDB-GENE-040718-50]
88. hhatla ENSDARG00000039051 6598 0.836 - - - - - - 0.836 - - hedgehog acyltransferase like, a [Source:ZFIN;Acc:ZDB-GENE-040426-1865]
89. zgc:92113 1738 0.836 - - - - - - 0.836 - - zgc:92113
90. tnw 16679 0.835 - - - - - - 0.835 - - tenascin W, transcript variant X2
91. tmod1 ENSDARG00000078318 470 0.835 - - - - - - 0.835 - - tropomodulin 1 [Source:ZFIN;Acc:ZDB-GENE-090312-131]
92. chrac1 ENSDARG00000042337 2590 0.835 - - - - - - - 0.835 - chromatin accessibility complex 1 [Source:ZFIN;Acc:ZDB-GENE-050227-18]
93. arglu1b ENSDARG00000018319 1110 0.834 - 0.834 - - - - - - - arginine and glutamate rich 1b [Source:ZFIN;Acc:ZDB-GENE-040426-736]
94. CABZ01041002.1 CABZ01041002.1 957 0.833 - - - - - - 0.833 - -
95. COL22A1 COL22A1 4473 0.833 - - - - - - 0.833 - -
96. nexn ENSDARG00000057317 10972 0.833 - - - - - - 0.833 - - nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
97. ALDH1L2 ENSDARG00000070230 2550 0.833 - - - - - - 0.833 - - aldehyde dehydrogenase 1 family, member L2 [Source:ZFIN;Acc:ZDB-GENE-100426-6]
98. zgc:92518 ENSDARG00000016343 3837 0.833 - - - - - - 0.833 - - zgc:92518 [Source:ZFIN;Acc:ZDB-GENE-040718-53]
99. TMPO TMPO 3264 0.833 - - - - - - 0.833 - -
100. plekhg5a ENSDARG00000025902 397 0.833 - - - - - - - 0.833 - pleckstrin homology domain containing, family G (with RhoGef domain) member 5a [Source:ZFIN;Acc:ZDB-GENE-060503-766]

There are 1085 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA