Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for pdgfaa

Gene Name Gene ID Reads Annotation
pdgfaa ENSDARG00000109371, ENSDARG00000110069, ENSDARG00000115665 2120 platelet-derived growth factor alpha polypeptide a [Source:ZFIN;Acc:ZDB-GENE-030918-2]










Genes with expression patterns similar to pdgfaa

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pdgfaa ENSDARG00000109371, ENSDARG00000110069, ENSDARG00000115665 2120 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 platelet-derived growth factor alpha polypeptide a [Source:ZFIN;Acc:ZDB-GENE-030918-2]
2. cldne ENSDARG00000043128 6960 1.831 - - - - - 0.964 0.867 - - claudin e [Source:ZFIN;Acc:ZDB-GENE-010328-5]
3. si:dkey-97i18.5 si:dkey-97i18.5 1362 1.785 - - - - - 0.987 0.798 - -
4. plagx ENSDARG00000036855 3768 1.746 - - - 0.760 - 0.986 - - - pleiomorphic adenoma gene X [Source:ZFIN;Acc:ZDB-GENE-030131-839]
5. arf1l arf1l 9119 1.741 - - - - - 0.952 0.789 - -
6. VPS37C ENSDARG00000031836 906 1.715 - - - - - 0.996 - 0.719 - vacuolar protein sorting 37 homolog C (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-061110-126]
7. nfe2l2a ENSDARG00000042824 1707 1.715 - - - - - 0.986 0.729 - - nuclear factor, erythroid 2-like 2a [Source:ZFIN;Acc:ZDB-GENE-030723-2]
8. CABZ01088039.1 CABZ01088039.1 2482 1.71 - 0.727 - - - 0.983 - - -
9. xirp1 ENSDARG00000030722 1486 1.708 - - - - - 0.995 - 0.713 - xin actin binding repeat containing 1 [Source:ZFIN;Acc:ZDB-GENE-050221-2]
10. tfg ENSDARG00000003641, ENSDARG00000115188 3834 1.703 - - - - - 0.996 0.707 - - trk-fused gene [Source:ZFIN;Acc:ZDB-GENE-030131-8410]
11. ARHGEF5 2727 1.698 - - - - - 0.923 0.775 - - Rho guanine nucleotide exchange factor (GEF) 5, transcript variant X2
12. hmgb2b ENSDARG00000053990 11519 1.697 0.733 - - - - 0.964 - - - high mobility group box 2b [Source:ZFIN;Acc:ZDB-GENE-040912-122]
13. pon3 pon3 1146 1.696 - - - - - 0.991 0.705 - -
14. padi2 ENSDARG00000044167 6765 1.687 - - - - - 0.924 0.763 - - peptidyl arginine deiminase, type II [Source:ZFIN;Acc:ZDB-GENE-031116-67]
15. myl6 ENSDARG00000008494, ENSDARG00000115496 16296 1.686 - - - - - 0.975 0.711 - - myosin, light chain 6, alkali, smooth muscle and non-muscle [Source:ZFIN;Acc:ZDB-GENE-041010-28]
16. ambp ENSDARG00000004296, ENSDARG00000112731 1305 1.659 - - - - - 0.917 0.742 - - alpha-1-microglobulin/bikunin precursor [Source:ZFIN;Acc:ZDB-GENE-040426-1608]
17. ehd1a ENSDARG00000098853 1092 1.597 - 0.736 - - - - 0.861 - - EH-domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2518]
18. mhc1zba ENSDARG00000036588 761 1.58 - - - - - - 0.813 0.767 - major histocompatibility complex class I ZBA [Source:ZFIN;Acc:ZDB-GENE-040426-2149]
19. prps1a ENSDARG00000015524 23738 1.565 - - - - - 0.839 0.726 - - phosphoribosyl pyrophosphate synthetase 1A [Source:ZFIN;Acc:ZDB-GENE-011212-5]
20. igfbp2a ENSDARG00000052470, ENSDARG00000111105 1939 1.544 - 0.704 - - - - 0.840 - - insulin-like growth factor binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-000125-12]
21. GPR31 431 1.521 - 0.762 - - - - 0.759 - - G protein-coupled receptor 31
22. slc26a5 ENSDARG00000022424 976 1.517 - 0.797 - - - - 0.720 - - solute carrier family 26 (anion exchanger), member 5 [Source:ZFIN;Acc:ZDB-GENE-030131-1566]
23. CDS1 ENSDARG00000019549 1659 1.514 - 0.701 - - - - 0.813 - - CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 1 [Source:ZFIN;Acc:ZDB-GENE-070705-78]
24. vps9d1 ENSDARG00000019195 582 1.498 - 0.797 - - - - 0.701 - - VPS9 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050306-57]
25. CABZ01080116.1 CABZ01080116.1 407 1.485 - 0.759 - - - - - 0.726 -
26. CU469577.1 ENSDARG00000102850 1232 1.484 - 0.728 - - - - 0.756 - -
27. lrata ENSDARG00000037278, ENSDARG00000112503 1510 1.479 - 0.715 - - - - 0.764 - - lecithin retinol acyltransferase a [Source:ZFIN;Acc:ZDB-GENE-060720-1]
28. brd4 ENSDARG00000078904 5367 1.471 - 0.740 - - - - 0.731 - - bromodomain containing 4 [Source:ZFIN;Acc:ZDB-GENE-030131-267]
29. foxred2 ENSDARG00000061354 718 1.47 - - - - - - 0.756 0.714 - FAD-dependent oxidoreductase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060929-1026]
30. serinc2 ENSDARG00000056532 1406 1.469 - 0.765 - - - - 0.704 - - serine incorporator 2 [Source:ZFIN;Acc:ZDB-GENE-041111-296]
31. g6pca.2 ENSDARG00000013721 2034 1.458 - 0.710 - - - - 0.748 - - glucose-6-phosphatase a, catalytic subunit, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-050309-17]
32. nup35 ENSDARG00000012222 1212 1.457 - 0.733 - 0.724 - - - - - nucleoporin 35 [Source:ZFIN;Acc:ZDB-GENE-030131-9407]
33. sidt2 ENSDARG00000045976 1997 1.446 - 0.710 - - - - 0.736 - - SID1 transmembrane family, member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7356]
34. si:ch211-64i20.3 ENSDARG00000089934, ENSDARG00000105063 42 1.445 - - - - - - 0.720 0.725 - si:ch211-64i20.3 [Source:ZFIN;Acc:ZDB-GENE-110913-55]
35. cyp2x7 ENSDARG00000044002, ENSDARG00000109785 671 1.437 - 0.718 - - - - 0.719 - - cytochrome P450, family 2, subfamily X, polypeptide 7 [Source:ZFIN;Acc:ZDB-GENE-110114-2]
36. BRCC3 ENSDARG00000098242 1123 0.998 - - - - - 0.998 - - - BRCA1/BRCA2-containing complex, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-100215-1]
37. pgm2 ENSDARG00000018178 985 0.997 - - - - - 0.997 - - - phosphoglucomutase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2218]
38. flot2b ENSDARG00000069774 2831 0.997 - - - - - 0.997 - - - flotillin 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1368]
39. si:ch211-208h7.4 si:ch211-208h7.4 1334 0.997 - - - - - 0.997 - - -
40. yes1 ENSDARG00000005941 3577 0.997 - - - - - 0.997 - - - YES proto-oncogene 1, Src family tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-050126-1]
41. ppp2r2a ppp2r2a 5785 0.997 - - - - - 0.997 - - -
42. CASKIN2_1 CASKIN2_1 2299 0.996 - - - - - 0.996 - - -
43. las1l ENSDARG00000062457, ENSDARG00000114475 3987 0.996 - - - - - 0.996 - - - LAS1-like, ribosome biogenesis factor [Source:ZFIN;Acc:ZDB-GENE-030131-3625]
44. FP102157.1 FP102157.1 1096 0.996 - - - - - 0.996 - - -
45. eva1a ENSDARG00000061405 896 0.996 - - - - - 0.996 - - - eva-1 homolog A (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-060929-200]
46. vac14 ENSDARG00000014303 941 0.996 - - - - - 0.996 - - - vac14 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040912-82]
47. pank2 ENSDARG00000003311 881 0.996 - - - - - 0.996 - - - pantothenate kinase 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1952]
48. GPR108 ENSDARG00000096651 1734 0.996 - - - - - 0.996 - - - G protein-coupled receptor 108 [Source:ZFIN;Acc:ZDB-GENE-121214-129]
49. fktn ENSDARG00000059437, ENSDARG00000109351 340 0.996 - - - - - 0.996 - - - fukutin [Source:ZFIN;Acc:ZDB-GENE-070410-96]
50. yipf1 ENSDARG00000014474 542 0.996 - - - - - 0.996 - - - Yip1 domain family, member 1 [Source:ZFIN;Acc:ZDB-GENE-040822-35]
51. rc3h1 rc3h1 1087 0.996 - - - - - 0.996 - - -
52. bet1 ENSDARG00000034885, ENSDARG00000113480 3627 0.996 - - - - - 0.996 - - - Bet1 golgi vesicular membrane trafficking protein [Source:ZFIN;Acc:ZDB-GENE-040625-3]
53. PRIM2 ENSDARG00000052721 825 0.996 - - - - - 0.996 - - - DNA primase subunit 2 [Source:ZFIN;Acc:ZDB-GENE-050522-471]
54. PROSER1 ENSDARG00000086302 1935 0.996 - - - - - 0.996 - - - proline and serine rich 1 [Source:ZFIN;Acc:ZDB-GENE-111003-1]
55. TRIM35_3 TRIM35_3 172 0.996 - - - - - 0.996 - - -
56. mcts1 ENSDARG00000025972 4662 0.996 - - - - - 0.996 - - - malignant T cell amplified sequence 1 [Source:ZFIN;Acc:ZDB-GENE-040426-957]
57. nicn1 ENSDARG00000069677, ENSDARG00000116330 790 0.996 - - - - - 0.996 - - - nicolin 1 [Source:ZFIN;Acc:ZDB-GENE-040801-129]
58. zmynd8 ENSDARG00000007601 405 0.996 - - - - - 0.996 - - - zinc finger, MYND-type containing 8 [Source:ZFIN;Acc:ZDB-GENE-041119-1]
59. sec63 ENSDARG00000017740 3789 0.996 - - - - - 0.996 - - - SEC63 homolog, protein translocation regulator [Source:ZFIN;Acc:ZDB-GENE-040718-328]
60. hdac9b ENSDARG00000056642 1148 0.996 - - - - - 0.996 - - - histone deacetylase 9b [Source:ZFIN;Acc:ZDB-GENE-040109-7]
61. amt ENSDARG00000010862, ENSDARG00000113280 367 0.996 - - - - - 0.996 - - - aminomethyltransferase [Source:ZFIN;Acc:ZDB-GENE-041010-114]
62. pld2 ENSDARG00000034262 952 0.996 - - - - - 0.996 - - - phospholipase D2 [Source:ZFIN;Acc:ZDB-GENE-060216-4]
63. zfyve21 ENSDARG00000027887 1687 0.996 - - - - - 0.996 - - - zinc finger, FYVE domain containing 21 [Source:ZFIN;Acc:ZDB-GENE-030131-1296]
64. clip2 ENSDARG00000059596 529 0.996 - - - - - 0.996 - - - CAP-GLY domain containing linker protein 2 [Source:ZFIN;Acc:ZDB-GENE-100727-3]
65. cyb561a3a ENSDARG00000056281 667 0.996 - - - - - 0.996 - - - cytochrome b561 family, member A3a [Source:ZFIN;Acc:ZDB-GENE-060526-374]
66. sh3yl1 ENSDARG00000074393 815 0.996 - - - - - 0.996 - - - SH3 and SYLF domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040128-16]
67. si:dkey-3d4.3 ENSDARG00000074079 365 0.996 - - - - - 0.996 - - - si:dkey-3d4.3 [Source:ZFIN;Acc:ZDB-GENE-070912-527]
68. nog2 ENSDARG00000043066 233 0.996 - - - - - 0.996 - - - noggin 2 [Source:ZFIN;Acc:ZDB-GENE-991206-14]
69. uggt1 ENSDARG00000054746 2060 0.995 - - - - - 0.995 - - - UDP-glucose glycoprotein glucosyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-061103-619]
70. pbxip1b ENSDARG00000011824 3726 0.995 - - - - - 0.995 - - - pre-B-cell leukemia homeobox interacting protein 1b [Source:ZFIN;Acc:ZDB-GENE-070112-2032]
71. dfna5 dfna5 361 0.995 - - - - - 0.995 - - -
72. tdrd3 ENSDARG00000025421 633 0.995 - - - - - 0.995 - - - tudor domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-19]
73. si:ch211-163l21.8 ENSDARG00000042899 724 0.995 - - - - - 0.995 - - - si:ch211-163l21.8 [Source:ZFIN;Acc:ZDB-GENE-041008-93]
74. klhl41a ENSDARG00000068888 1034 0.995 - - - - - 0.995 - - - kelch-like family member 41a [Source:ZFIN;Acc:ZDB-GENE-081105-22]
75. triqk ENSDARG00000076296 1274 0.995 - - - - - 0.995 - - - triple QxxK/R motif containing [Source:ZFIN;Acc:ZDB-GENE-070705-75]
76. C9H2orf76 C9H2orf76 559 0.995 - - - - - 0.995 - - -
77. mboat2a ENSDARG00000031845 1255 0.995 - - - - - 0.995 - - - membrane bound O-acyltransferase domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-041210-257]
78. imp4 ENSDARG00000054540 1396 0.995 - - - - - 0.995 - - - IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-474]
79. SMARCA1 ENSDARG00000012776 673 0.995 - - - - - 0.995 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 [Source:ZFIN;Acc:ZDB-GENE-070705-296]
80. zgc:112484 zgc:112484 780 0.995 - - - - - 0.995 - - -
81. creg2 ENSDARG00000000666 643 0.995 - - - - - 0.995 - - - cellular repressor of E1A-stimulated genes 2 [Source:ZFIN;Acc:ZDB-GENE-041114-173]
82. rabgef1 ENSDARG00000014430 1176 0.995 - - - - - 0.995 - - - RAB guanine nucleotide exchange factor (GEF) 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1486]
83. kdrl ENSDARG00000105215 766 0.995 - - - - - 0.995 - - - kinase insert domain receptor like [Source:ZFIN;Acc:ZDB-GENE-000705-1]
84. zmat5 ENSDARG00000035434 983 0.995 - - - - - 0.995 - - - zinc finger, matrin-type 5 [Source:ZFIN;Acc:ZDB-GENE-040808-31]
85. lap3 ENSDARG00000061981 1188 0.995 - - - - - 0.995 - - - leucine aminopeptidase 3 [Source:ZFIN;Acc:ZDB-GENE-060719-1]
86. si:dkey-11e23.5 si:dkey-11e23.5 3464 0.995 - - - - - 0.995 - - -
87. CREM CREM 1333 0.995 - - - - - 0.995 - - -
88. itpkb ENSDARG00000010059 2352 0.995 - - - - - 0.995 - - - inositol-trisphosphate 3-kinase B [Source:ZFIN;Acc:ZDB-GENE-041014-166]
89. trim44 ENSDARG00000051761 509 0.995 - - - - - 0.995 - - - tripartite motif containing 44 [Source:ZFIN;Acc:ZDB-GENE-050522-37]
90. mst4 mst4 1672 0.995 - - - - - 0.995 - - -
91. mpi ENSDARG00000030786 3052 0.995 - - - - - 0.995 - - - mannose phosphate isomerase [Source:ZFIN;Acc:ZDB-GENE-050904-6]
92. PLEKHG4 ENSDARG00000075964 2860 0.995 - - - - - 0.995 - - - pleckstrin homology domain containing, family G (with RhoGef domain) member 4 [Source:ZFIN;Acc:ZDB-GENE-030131-4824]
93. rbm42 ENSDARG00000039910 1111 0.995 - - - - - 0.995 - - - RNA binding motif protein 42 [Source:ZFIN;Acc:ZDB-GENE-040809-2]
94. mrpl41 ENSDARG00000002264 1756 0.995 - - - - - 0.995 - - - mitochondrial ribosomal protein L41 [Source:ZFIN;Acc:ZDB-GENE-050522-200]
95. parn ENSDARG00000102634 2049 0.995 - - - - - 0.995 - - - poly(A)-specific ribonuclease (deadenylation nuclease) [Source:ZFIN;Acc:ZDB-GENE-040426-880]
96. tmem134 ENSDARG00000024828 3241 0.995 - - - - - 0.995 - - - transmembrane protein 134 [Source:ZFIN;Acc:ZDB-GENE-040426-1345]
97. sf3b4 ENSDARG00000018574 7470 0.995 - - - - - 0.995 - - - splicing factor 3b, subunit 4 [Source:ZFIN;Acc:ZDB-GENE-020419-22]
98. rhebl1 ENSDARG00000039162 3966 0.994 - - - - - 0.994 - - - Ras homolog, mTORC1 binding like 1 [Source:ZFIN;Acc:ZDB-GENE-000510-1]
99. abat ENSDARG00000006031 2143 0.994 - - - - - 0.994 - - - 4-aminobutyrate aminotransferase [Source:ZFIN;Acc:ZDB-GENE-031006-4]
100. pes ENSDARG00000018902 3286 0.994 - - - - - 0.994 - - - pescadillo [Source:ZFIN;Acc:ZDB-GENE-990415-206]

There are 863 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA