Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for pde6d

Gene Name Gene ID Reads Annotation
pde6d ENSDARG00000074892, ENSDARG00000115562, ENSDARG00000115620 506 phosphodiesterase 6D, cGMP-specific, rod, delta [Source:ZFIN;Acc:ZDB-GENE-040718-463]










Genes with expression patterns similar to pde6d

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pde6d ENSDARG00000074892, ENSDARG00000115562, ENSDARG00000115620 506 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 phosphodiesterase 6D, cGMP-specific, rod, delta [Source:ZFIN;Acc:ZDB-GENE-040718-463]
2. ect2 ENSDARG00000007278 1193 1.707 - - - - - - 0.754 0.953 - epithelial cell transforming 2 [Source:ZFIN;Acc:ZDB-GENE-040831-2]
3. celsr1b ENSDARG00000058259 1219 1.672 - - - - - - 0.851 0.821 - cadherin EGF LAG seven-pass G-type receptor 1b [Source:ZFIN;Acc:ZDB-GENE-050823-4]
4. dna2 ENSDARG00000078759 846 1.585 - - - - - - 0.780 0.805 - DNA replication helicase/nuclease 2 [Source:ZFIN;Acc:ZDB-GENE-090313-71]
5. CR942805.1 CR942805.1 94 1.579 - 0.781 - - - - - 0.798 -
6. laptm4b ENSDARG00000035870, ENSDARG00000110893 960 1.577 - 0.809 - - - - - 0.768 - lysosomal protein transmembrane 4 beta [Source:ZFIN;Acc:ZDB-GENE-030616-616]
7. PBRM1 ENSDARG00000003877 225 1.576 - 0.783 - - - - - 0.793 - polybromo 1 [Source:ZFIN;Acc:ZDB-GENE-080926-4]
8. C24H8orf33 C24H8orf33 406 1.554 - 0.753 - - - - - 0.801 -
9. trmt2b ENSDARG00000033967 127 1.554 - 0.818 - - - 0.736 - - - tRNA methyltransferase 2 homolog B [Source:ZFIN;Acc:ZDB-GENE-050809-101]
10. dpy19l1l ENSDARG00000069995 584 1.551 - - - - - 0.764 - 0.787 - dpy-19-like 1, like (H. sapiens) [Source:ZFIN;Acc:ZDB-GENE-030521-11]
11. slain2 ENSDARG00000032114 798 1.543 - - - - - - 0.767 0.776 - SLAIN motif family, member 2 [Source:ZFIN;Acc:ZDB-GENE-041014-251]
12. pik3c2b ENSDARG00000086927 864 1.538 - 0.788 - - - - - 0.750 - phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 beta [Source:ZFIN;Acc:ZDB-GENE-050309-145]
13. plagx ENSDARG00000036855 3768 1.538 - - - - - - 0.720 0.818 - pleiomorphic adenoma gene X [Source:ZFIN;Acc:ZDB-GENE-030131-839]
14. MAP7_1 MAP7_1 42 1.53 - 0.783 - - - 0.747 - - -
15. fat3a ENSDARG00000033840 902 1.524 - - - - - - - 0.751 0.773 FAT atypical cadherin 3a [Source:ZFIN;Acc:ZDB-GENE-060929-1254]
16. fra10ac1 ENSDARG00000102615 425 1.502 - - - - - - 0.705 0.797 - FRA10A associated CGG repeat 1 [Source:ZFIN;Acc:ZDB-GENE-041010-95]
17. fbxl16 ENSDARG00000060915 259 1.41 - - - - - - 0.708 - 0.702 F-box and leucine-rich repeat protein 16 [Source:ZFIN;Acc:ZDB-GENE-120215-180]
18. CR388095.3 CR388095.3 2548 0.937 - - - - - - - 0.937 -
19. ARHGAP32 ARHGAP32 670 0.932 - - - - - - - 0.932 -
20. CACFD1 ENSDARG00000090818 1298 0.927 - - - - - - - 0.927 - calcium channel flower domain containing 1 [Source:HGNC Symbol;Acc:HGNC:1365]
21. noc3l ENSDARG00000002487 230 0.921 - 0.921 - - - - - - - NOC3-like DNA replication regulator [Source:ZFIN;Acc:ZDB-GENE-030131-9878]
22. cdc42ep4b ENSDARG00000045036 1295 0.921 - - - - - - - 0.921 - CDC42 effector protein (Rho GTPase binding) 4b [Source:ZFIN;Acc:ZDB-GENE-091008-2]
23. BX005175.1 ENSDARG00000112442 441 0.919 - - - - - - - 0.919 - protein kinase C, delta b [Source:NCBI gene;Acc:100150844]
24. si:dkey-30k6.5 ENSDARG00000057238 617 0.914 - - - - - - - 0.914 - si:dkey-30k6.5 [Source:ZFIN;Acc:ZDB-GENE-091204-299]
25. POLE4 ENSDARG00000013016 848 0.911 - - - - - - - 0.911 - polymerase (DNA-directed), epsilon 4, accessory subunit [Source:ZFIN;Acc:ZDB-GENE-050522-309]
26. man1a1 ENSDARG00000005652 877 0.902 - - - - - - - 0.902 - mannosidase, alpha, class 1A, member 1 [Source:ZFIN;Acc:ZDB-GENE-041014-321]
27. FEZ2_1 FEZ2_1 153 0.902 - 0.902 - - - - - - -
28. ATP13A3 ENSDARG00000076622 1000 0.899 - - - - - - - 0.899 - ATPase 13A3 [Source:ZFIN;Acc:ZDB-GENE-120521-1]
29. brd1a ENSDARG00000013596, ENSDARG00000116694 547 0.892 - 0.892 - - - - - - - bromodomain containing 1a [Source:ZFIN;Acc:ZDB-GENE-041008-168]
30. ZNF710 ZNF710 766 0.889 - - - - - - - 0.889 -
31. rad1 ENSDARG00000040559 750 0.887 - 0.887 - - - - - - - RAD1 homolog (S. pombe) [Source:ZFIN;Acc:ZDB-GENE-040426-1873]
32. rnf121 ENSDARG00000060282 1809 0.886 - - - - - - - 0.886 - ring finger protein 121 [Source:ZFIN;Acc:ZDB-GENE-050809-3]
33. ube2d2l ENSDARG00000099749 1462 0.886 - - - - - - - 0.886 - ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast), like [Source:ZFIN;Acc:ZDB-GENE-030131-7384]
34. med27 ENSDARG00000009681 1857 0.886 - - - - - - - 0.886 - mediator complex subunit 27 [Source:ZFIN;Acc:ZDB-GENE-040426-1601]
35. dapk1 ENSDARG00000060093 351 0.885 - - - - - - - 0.885 - death-associated protein kinase 1 [Source:ZFIN;Acc:ZDB-GENE-060526-177]
36. phc2b_1 ENSDARG00000013224 1316 0.883 - 0.883 - - - - - - - polyhomeotic homolog 2b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-1113]
37. ier3ip1 ENSDARG00000039601 5529 0.882 - - - - - - - 0.882 - immediate early response 3 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-050506-106]
38. plekhj1 ENSDARG00000025593 696 0.881 - - - - - - - 0.881 - pleckstrin homology domain containing, family J member 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2480]
39. klf4b klf4b 533 0.876 - 0.876 - - - - - - -
40. psmc3ip ENSDARG00000037892 214 0.875 - 0.875 - - - - - - - PSMC3 interacting protein [Source:ZFIN;Acc:ZDB-GENE-040625-125]
41. polr2gl ENSDARG00000056127 1771 0.874 - - - - - - - 0.874 - polymerase (RNA) II (DNA directed) polypeptide G-like [Source:ZFIN;Acc:ZDB-GENE-030131-2808]
42. FAM65C 127 0.871 - 0.871 - - - - - - - family with sequence similarity 65, member C, transcript variant X2
43. itm2ba ENSDARG00000007098 5686 0.87 - - - - - - - 0.870 - integral membrane protein 2Ba [Source:ZFIN;Acc:ZDB-GENE-030131-2352]
44. CU181898.3 CU181898.3 440 0.869 - - - - - - - 0.869 -
45. CCKBR CCKBR 88 0.868 - - - - - - 0.868 - -
46. CHCHD4 CHCHD4 185 0.864 - 0.864 - - - - - - -
47. qdpra ENSDARG00000040190 4064 0.862 - - - - - - - 0.862 - quinoid dihydropteridine reductase a [Source:ZFIN;Acc:ZDB-GENE-070705-197]
48. zgc:171971 ENSDARG00000042054 388 0.86 - - - - - 0.860 - - - zgc:171971 [Source:ZFIN;Acc:ZDB-GENE-070928-37]
49. CU467832.1 CU467832.1 635 0.86 - - - - - - - 0.860 -
50. serpine3 ENSDARG00000057108 49 0.859 - 0.859 - - - - - - - serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3 [Source:ZFIN;Acc:ZDB-GENE-050309-223]
51. pip5k2 pip5k2 5743 0.859 - - - - - - - 0.859 -
52. dnmbp ENSDARG00000074121 2711 0.857 - - - - - - - 0.857 - dynamin binding protein [Source:ZFIN;Acc:ZDB-GENE-101026-2]
53. CU207301.4 CU207301.4 192 0.855 - 0.855 - - - - - - -
54. CABZ01078431.1 CABZ01078431.1 183 0.853 - 0.853 - - - - - - -
55. ppap2b ppap2b 2900 0.849 - - - - - - - 0.849 -
56. si:ch211-66k16.20 si:ch211-66k16.20 162 0.848 - 0.848 - - - - - - -
57. SCAF8 1618 0.846 - - - - - - 0.846 - - SR-related CTD-associated factor 8, transcript variant X3
58. WARS ENSDARG00000100954 309 0.844 - 0.844 - - - - - - - tryptophanyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-1742]
59. CABZ01074946.1 CABZ01074946.1 119 0.839 - 0.839 - - - - - - -
60. ECE2 ECE2 293 0.836 - - - - - 0.836 - - -
61. mob2b ENSDARG00000012005 395 0.833 - 0.833 - - - - - - - MOB kinase activator 2b [Source:ZFIN;Acc:ZDB-GENE-060616-319]
62. smc3 ENSDARG00000019000, ENSDARG00000112055 6553 0.832 - - - - - - - 0.832 - structural maintenance of chromosomes 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3196]
63. tmem222b ENSDARG00000104097 132 0.83 - - - - - 0.830 - - - transmembrane protein 222b [Source:ZFIN;Acc:ZDB-GENE-090303-4]
64. foxred1 ENSDARG00000099705 217 0.829 - 0.829 - - - - - - - FAD-dependent oxidoreductase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-080204-64]
65. sp5 sp5 622 0.828 - - - - - 0.828 - - -
66. smad1 ENSDARG00000027199, ENSDARG00000112617, ENSDARG00000115674 2791 0.827 - - - - - - - 0.827 - SMAD family member 1 [Source:ZFIN;Acc:ZDB-GENE-991119-8]
67. nkd1 ENSDARG00000020053 4450 0.827 - - - - - - - 0.827 - naked cuticle homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-061108-3]
68. adck5 ENSDARG00000075405 270 0.826 - 0.826 - - - - - - - aarF domain containing kinase 5 [Source:ZFIN;Acc:ZDB-GENE-081104-149]
69. exd2 ENSDARG00000016117 342 0.825 - - - - - 0.825 - - - exonuclease 3'-5' domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6387]
70. PELP1 ENSDARG00000079313 5771 0.824 - - - - - - - 0.824 - proline, glutamate and leucine rich protein 1 [Source:ZFIN;Acc:ZDB-GENE-140106-164]
71. trim35-40 ENSDARG00000042116 398 0.824 - - - - - - - 0.824 - tripartite motif containing 35-40 [Source:ZFIN;Acc:ZDB-GENE-030131-6081]
72. CABZ01087514.1 ENSDARG00000090861 245 0.822 - 0.822 - - - - - - - peroxisomal membrane protein PMP34-like [Source:NCBI gene;Acc:566378]
73. si:ch73-387e10.3 si:ch73-387e10.3 517 0.822 - - - - - 0.822 - - -
74. stard3nl ENSDARG00000045421 316 0.821 - - - - - - - 0.821 - STARD3 N-terminal like [Source:ZFIN;Acc:ZDB-GENE-040718-4]
75. cacybp ENSDARG00000014731 2650 0.821 - - - - - - - 0.821 - calcyclin binding protein [Source:ZFIN;Acc:ZDB-GENE-040426-2579]
76. spock3 ENSDARG00000070266, ENSDARG00000110158 934 0.821 - - - - - - - 0.821 - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3 [Source:ZFIN;Acc:ZDB-GENE-090311-24]
77. gpr61 ENSDARG00000055570 128 0.821 - - - - - - - 0.821 - G protein-coupled receptor 61 [Source:ZFIN;Acc:ZDB-GENE-081104-239]
78. TMEM218 ENSDARG00000027129 716 0.821 - 0.821 - - - - - - - transmembrane protein 218 [Source:ZFIN;Acc:ZDB-GENE-040426-1232]
79. BOD1L2 BOD1L2 32 0.82 - 0.820 - - - - - - -
80. itga2.1 ENSDARG00000069390 6 0.82 - 0.820 - - - - - - - integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-111011-4]
81. ENDOD1_7 ENDOD1_7 33 0.819 - 0.819 - - - - - - -
82. kmt2bb ENSDARG00000060697 5230 0.818 - - - - - - - 0.818 - lysine (K)-specific methyltransferase 2Bb [Source:ZFIN;Acc:ZDB-GENE-080521-1]
83. E2F2 E2F2 871 0.818 - - - - - - - 0.818 -
84. cdan1 ENSDARG00000042261 658 0.817 - - - - - - - 0.817 - codanin 1 [Source:ZFIN;Acc:ZDB-GENE-110411-280]
85. ggcx ENSDARG00000067805 3812 0.816 - - - - - - - 0.816 - gamma-glutamyl carboxylase [Source:ZFIN;Acc:ZDB-GENE-030826-27]
86. OSCP1 ENSDARG00000101888 59 0.816 - 0.816 - - - - - - - organic solute carrier partner 1 [Source:HGNC Symbol;Acc:HGNC:29971]
87. otx1b 96 0.816 - - - - - - - 0.816 - orthodenticle homeobox 1b
88. trrap ENSDARG00000100623 3429 0.816 - - - - - - - 0.816 - transformation/transcription domain-associated protein [Source:ZFIN;Acc:ZDB-GENE-050809-47]
89. rlbp1a ENSDARG00000012504 111 0.815 - - - - - - - 0.815 - retinaldehyde binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1662]
90. naa30 ENSDARG00000079686 814 0.815 - - - - - - - 0.815 - N(alpha)-acetyltransferase 30, NatC catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-081022-73]
91. RPTOR ENSDARG00000098726, ENSDARG00000116019 420 0.815 - 0.815 - - - - - - - regulatory associated protein of MTOR, complex 1 [Source:ZFIN;Acc:ZDB-GENE-130530-685]
92. ppil4 ENSDARG00000043854, ENSDARG00000114623 858 0.815 - - - - - - - 0.815 - peptidylprolyl isomerase (cyclophilin)-like 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6251]
93. gpr37l1a ENSDARG00000006079 422 0.813 - - - - - - - 0.813 - G protein-coupled receptor 37 like 1a [Source:ZFIN;Acc:ZDB-GENE-110411-20]
94. ogfr ENSDARG00000037837 1001 0.812 - - - - - - - 0.812 - opioid growth factor receptor [Source:ZFIN;Acc:ZDB-GENE-030131-377]
95. mier1a ENSDARG00000041072 1690 0.812 - - - - - - - 0.812 - mesoderm induction early response 1a, transcriptional regulator [Source:ZFIN;Acc:ZDB-GENE-030131-409]
96. WIZ WIZ 1188 0.812 - - - - - - - 0.812 -
97. MAPRE2 ENSDARG00000099943 3041 0.812 - - - - - - - 0.812 - microtubule-associated protein, RP/EB family, member 2 [Source:ZFIN;Acc:ZDB-GENE-071004-41]
98. topbp1 ENSDARG00000059322 241 0.811 - - - - - - - 0.811 - DNA topoisomerase II binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060626-1]
99. il2rb ENSDARG00000075720 116 0.811 - - - - - 0.811 - - - interleukin 2 receptor, beta [Source:ZFIN;Acc:ZDB-GENE-080108-2]
100. flt1 ENSDARG00000019371, ENSDARG00000111797 128 0.811 - 0.811 - - - - - - - fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor) [Source:ZFIN;Acc:ZDB-GENE-050407-1]

There are 822 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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