Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for pde6c

Gene Name Gene ID Reads Annotation
pde6c ENSDARG00000100397 49 phosphodiesterase 6C, cGMP-specific, cone, alpha prime [Source:ZFIN;Acc:ZDB-GENE-040426-1664]










Genes with expression patterns similar to pde6c

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pde6c ENSDARG00000100397 49 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 phosphodiesterase 6C, cGMP-specific, cone, alpha prime [Source:ZFIN;Acc:ZDB-GENE-040426-1664]
2. prdm2a ENSDARG00000090721 11 2 - - - - - 1.000 1.000 - - PR domain containing 2, with ZNF domain a [Source:ZFIN;Acc:ZDB-GENE-081104-139]
3. myo10l1 ENSDARG00000074723 21 1.965 1.000 - - - - 0.965 - - - myosin X-like 1 [Source:ZFIN;Acc:ZDB-GENE-080425-1]
4. PFKL PFKL 9 1.956 1.000 - - - - 0.956 - - -
5. stx11b.2 ENSDARG00000042231, ENSDARG00000110079 68 1.923 - - - - - 0.978 0.945 - - syntaxin 11b, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-050417-148]
6. als2a ENSDARG00000075111 29 1.911 1.000 - - - - 0.911 - - - amyotrophic lateral sclerosis 2a (juvenile) [Source:ZFIN;Acc:ZDB-GENE-070402-2]
7. myo1f ENSDARG00000078734 100 1.894 1.000 - - - - 0.894 - - - myosin IF [Source:ZFIN;Acc:ZDB-GENE-081104-506]
8. si:ch73-30l9.1 ENSDARG00000095891 42 1.892 1.000 - - - - 0.892 - - - si:ch73-30l9.1 [Source:ZFIN;Acc:ZDB-GENE-110411-132]
9. si:ch211-273j9.2 si:ch211-273j9.2 79 1.866 1.000 - - - - 0.866 - - -
10. ahdc1 ENSDARG00000093453 233 1.838 1.000 - - - - - 0.838 - - AT hook, DNA binding motif, containing 1 [Source:ZFIN;Acc:ZDB-GENE-060503-584]
11. esyt1b ENSDARG00000014239 8 1.818 1.000 - - - - - 0.818 - - extended synaptotagmin-like protein 1b [Source:ZFIN;Acc:ZDB-GENE-040724-209]
12. C6H22orf23 C6H22orf23 15 1.809 1.000 - - - - 0.809 - - -
13. chgb ENSDARG00000076500 42 1.806 1.000 - 0.806 - - - - - - chromogranin B [Source:ZFIN;Acc:ZDB-GENE-070705-268]
14. ptgis ENSDARG00000060094, ENSDARG00000113227 82 1.783 - - 0.790 - - 0.993 - - - prostaglandin I2 (prostacyclin) synthase [Source:ZFIN;Acc:ZDB-GENE-070116-1]
15. si:dkey-51d8.9 ENSDARG00000096217 47 1.774 - - - - - 0.890 0.884 - - si:dkey-51d8.9 [Source:ZFIN;Acc:ZDB-GENE-110914-66]
16. pet112 pet112 223 1.773 - - - - - 0.978 0.795 - -
17. stx3a ENSDARG00000001880 69 1.759 1.000 - - - - 0.759 - - - syntaxin 3A [Source:ZFIN;Acc:ZDB-GENE-040426-1489]
18. six3a ENSDARG00000058008, ENSDARG00000114971 586 1.753 0.865 - - - - - 0.888 - - SIX homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-990415-127]
19. il6st ENSDARG00000104693 55 1.739 0.841 - - - - 0.898 - - - interleukin 6 signal transducer [Source:ZFIN;Acc:ZDB-GENE-080104-6]
20. pou2f2b pou2f2b 134 1.734 1.000 - - - - - 0.734 - -
21. si:dkey-94e7.2 ENSDARG00000068474 14 1.711 - - - 0.711 - 1.000 - - - si:dkey-94e7.2 [Source:ZFIN;Acc:ZDB-GENE-070912-611]
22. gpc2 ENSDARG00000104217 10 1.696 - - - - - 0.937 0.759 - - glypican 2 [Source:ZFIN;Acc:ZDB-GENE-050302-31]
23. si:dkey-32n7.4 ENSDARG00000002956 3 1.652 - - - 0.829 0.823 - - - - si:dkey-32n7.4 [Source:ZFIN;Acc:ZDB-GENE-110411-175]
24. BX950859.2 BX950859.2 10 1.638 - - - 0.719 - 0.919 - - -
25. mfge8a ENSDARG00000015349 66 1.611 - - 0.803 - - - 0.808 - - milk fat globule-EGF factor 8 protein a [Source:ZFIN;Acc:ZDB-GENE-050327-9]
26. map3k19 ENSDARG00000094272 59 1.601 0.880 - - - - 0.721 - - - mitogen-activated protein kinase kinase kinase 19 [Source:ZFIN;Acc:ZDB-GENE-081104-140]
27. add3b ENSDARG00000056250, ENSDARG00000114699 119 1.598 0.711 - - - - 0.887 - - - adducin 3 (gamma) b [Source:ZFIN;Acc:ZDB-GENE-080718-6]
28. DNAH10 ENSDARG00000061486 29 1.576 - - 0.737 0.839 - - - - - dynein axonemal heavy chain 10 [Source:HGNC Symbol;Acc:HGNC:2941]
29. si:dkey-27c15.3 ENSDARG00000056847 37 1.564 0.841 - 0.723 - - - - - - si:dkey-27c15.3 [Source:ZFIN;Acc:ZDB-GENE-060503-728]
30. zgc:123297 ENSDARG00000056798, ENSDARG00000102158 62 1.514 - 0.704 - - - 0.810 - - - zgc:123297 [Source:ZFIN;Acc:ZDB-GENE-051127-9]
31. tmem237b ENSDARG00000074248 139 1.509 - - - - - 0.753 0.756 - - transmembrane protein 237b [Source:ZFIN;Acc:ZDB-GENE-040912-63]
32. USP2 USP2 157 1.494 - 0.704 - - - 0.790 - - -
33. KCNK17 ENSDARG00000105453 16 1.49 0.710 - 0.780 - - - - - - potassium channel, subfamily K, member 17 [Source:ZFIN;Acc:ZDB-GENE-120113-3]
34. rarga ENSDARG00000034117 1238 1.488 0.778 - - - - 0.710 - - - retinoic acid receptor gamma a [Source:ZFIN;Acc:ZDB-GENE-980526-531]
35. spata4 ENSDARG00000036189, ENSDARG00000114468 118 1.477 0.708 - - - - - 0.769 - - spermatogenesis associated 4 [Source:ZFIN;Acc:ZDB-GENE-050417-153]
36. HYKK HYKK 261 1.475 - 0.728 0.747 - - - - - -
37. ogfod1 ENSDARG00000036061 417 1.462 - 0.701 - - - 0.761 - - - 2-oxoglutarate and iron-dependent oxygenase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3294]
38. asb4 ENSDARG00000034988 1115 1.46 0.759 - - - - - 0.701 - - ankyrin repeat and SOCS box containing 4 [Source:ZFIN;Acc:ZDB-GENE-050417-100]
39. mpp6a ENSDARG00000056892 324 1.46 - 0.709 - - - - 0.751 - - membrane protein, palmitoylated 6a (MAGUK p55 subfamily member 6) [Source:ZFIN;Acc:ZDB-GENE-050506-35]
40. ccm2l ENSDARG00000063089 100 1.447 0.721 0.726 - - - - - - - CCM2 like scaffold protein [Source:ZFIN;Acc:ZDB-GENE-090313-248]
41. atrip ENSDARG00000063076 385 1.441 - 0.736 - - - 0.705 - - - ATR interacting protein [Source:ZFIN;Acc:ZDB-GENE-050208-331]
42. BX649415.1 BX649415.1 5 1 - - - - - 1.000 - - -
43. HIPK1 HIPK1 8 1 1.000 - - - - - - - -
44. BX005085.3 ENSDARG00000103450 45 1 - - - - - 1.000 - - -
45. cd74b ENSDARG00000036628 8 1 1.000 - - - - - - - - CD74 molecule, major histocompatibility complex, class II invariant chain b [Source:ZFIN;Acc:ZDB-GENE-990910-10]
46. si:dkey-11f4.7 ENSDARG00000099207 1 1 - - - - - - 1.000 - - si:dkey-11f4.7 [Source:ZFIN;Acc:ZDB-GENE-070912-361]
47. pde11al ENSDARG00000006151 70 1 - - - - - 1.000 - - - phosphodiesterase 11a, like [Source:ZFIN;Acc:ZDB-GENE-031118-106]
48. LRRC41 LRRC41 11 1 1.000 - - - - - - - -
49. hrh3 ENSDARG00000035942 32 1 1.000 - - - - - - - - histamine receptor H3 [Source:ZFIN;Acc:ZDB-GENE-040724-204]
50. ms4a17a.9 ENSDARG00000094854 933 1 1.000 - - - - - - - - membrane-spanning 4-domains, subfamily A, member 17A.9 [Source:ZFIN;Acc:ZDB-GENE-050320-79]
51. prlrb ENSDARG00000045955 12 1 1.000 - - - - - - - - prolactin receptor b [Source:ZFIN;Acc:ZDB-GENE-070705-155]
52. PLEKHS1_2 PLEKHS1_2 21 1 - - - - - 1.000 - - -
53. mxd ENSDARG00000023369 8 1 - - - - - 1.000 - - - myxovirus (influenza virus) resistance D [Source:ZFIN;Acc:ZDB-GENE-030721-8]
54. esr2a ENSDARG00000016454 23 1 - - - - - - 1.000 - - estrogen receptor 2a [Source:ZFIN;Acc:ZDB-GENE-030116-2]
55. si:ch73-299h12.9 ENSDARG00000104488 81 1 1.000 - - - - - - - - si:ch73-299h12.9 [Source:ZFIN;Acc:ZDB-GENE-081031-87]
56. CT583626.2 CT583626.2 53 1 - - - - - - 1.000 - -
57. CR933820.2 CR933820.2 152 1 1.000 - - - - - - - -
58. tmc4 ENSDARG00000031757 30 1 1.000 - - - - - - - - transmembrane channel-like 4 [Source:ZFIN;Acc:ZDB-GENE-030131-7489]
59. si:dkey-9i23.6 ENSDARG00000094678 58 1 - - - - - 1.000 - - - si:dkey-9i23.6 [Source:ZFIN;Acc:ZDB-GENE-090313-365]
60. bsx ENSDARG00000068976, ENSDARG00000110782 139 1 1.000 - - - - - - - - brain-specific homeobox [Source:ZFIN;Acc:ZDB-GENE-040628-4]
61. si:dkeyp-86f8.2 si:dkeyp-86f8.2 5 1 1.000 - - - - - - - -
62. PROC PROC 11 1 1.000 - - - - - - - -
63. C4H12orf39 C4H12orf39 73 1 1.000 - - - - - - - -
64. si:dkeyp-100a1.5 si:dkeyp-100a1.5 8 1 1.000 - - - - - - - -
65. CR677591.1 CR677591.1 19 1 - - - - - 1.000 - - -
66. msgn1 ENSDARG00000070546 188 1 1.000 - - - - - - - - mesogenin 1 [Source:ZFIN;Acc:ZDB-GENE-030722-1]
67. ifitm5 ENSDARG00000105153 132 1 1.000 - - - - - - - - interferon induced transmembrane protein 5 [Source:ZFIN;Acc:ZDB-GENE-030131-8970]
68. U8 U8 11 1 1.000 - - - - - - - -
69. nkiras2_1 ENSDARG00000052594 31 1 - - - - - 1.000 - - - NFKB inhibitor interacting Ras-like 2 [Source:ZFIN;Acc:ZDB-GENE-040801-166]
70. CABZ01085657.1 CABZ01085657.1 23 1 - - - - - 1.000 - - -
71. Mar-03 Mar-03 44 1 1.000 - - - - - - - -
72. cd74a ENSDARG00000009087 20 1 1.000 - - - - - - - - CD74 molecule, major histocompatibility complex, class II invariant chain a [Source:ZFIN;Acc:ZDB-GENE-000901-1]
73. GTF3A GTF3A 6 1 1.000 - - - - - - - -
74. exosc4 ENSDARG00000103432 21 1 1.000 - - - - - - - - exosome component 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1702]
75. tmem196b ENSDARG00000090140 20 1 - - - - - 1.000 - - - transmembrane protein 196b [Source:ZFIN;Acc:ZDB-GENE-110914-248]
76. SLC1A7 SLC1A7 3 1 - - - - - 1.000 - - -
77. CABZ01118004.1 ENSDARG00000117218 2 1 - - - - - 1.000 - - -
78. cabp2a ENSDARG00000052016 19 1 - - - - - - 1.000 - - calcium binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-050913-25]
79. zgc:174696 ENSDARG00000110658 67 1 - - - - - 1.000 - - - zgc:174696 [Source:ZFIN;Acc:ZDB-GENE-030131-2836]
80. sowahaa ENSDARG00000077861 3 1 - - - - - 1.000 - - - sosondowah ankyrin repeat domain family member Aa [Source:ZFIN;Acc:ZDB-GENE-100910-3]
81. si:dkey-11o1.3 ENSDARG00000093279 2 1 1.000 - - - - - - - - si:dkey-11o1.3 [Source:ZFIN;Acc:ZDB-GENE-100921-37]
82. si:dkey-101n15.3 si:dkey-101n15.3 1 1 - - - - - - 1.000 - -
83. si:dkey-77f17.1 si:dkey-77f17.1 83 1 - - - - - - 1.000 - -
84. 5S_rRNA_23 5S_rRNA_23 2 1 - - - - - 1.000 - - -
85. edaradd ENSDARG00000062289 66 1 - - - - - - 1.000 - - EDAR-associated death domain [Source:ZFIN;Acc:ZDB-GENE-050114-5]
86. trim35-29 ENSDARG00000055730 24 1 1.000 - - - - - - - - tripartite motif containing 35-29 [Source:ZFIN;Acc:ZDB-GENE-041114-35]
87. si:dkey-101d6.4 si:dkey-101d6.4 6 1 1.000 - - - - - - - -
88. wu:fb64b08 wu:fb64b08 8 1 1.000 - - - - - - - -
89. itln3 ENSDARG00000003523 3 1 - - - - - 1.000 - - - intelectin 3 [Source:ZFIN;Acc:ZDB-GENE-090527-4]
90. CT583679.1 CT583679.1 11 1 - - - - - 1.000 - - -
91. rtdr1 rtdr1 158 1 1.000 - - - - - - - -
92. PDE9A ENSDARG00000060280 58 1 1.000 - - - - - - - - phosphodiesterase 9A [Source:ZFIN;Acc:ZDB-GENE-130920-1]
93. GPR26 ENSDARG00000074389, ENSDARG00000116243 21 1 - - - - - - 1.000 - - G protein-coupled receptor 26 [Source:ZFIN;Acc:ZDB-GENE-131121-131]
94. ssr1 ENSDARG00000101627 151 1 - - - - - 1.000 - - - signal sequence receptor, alpha [Source:ZFIN;Acc:ZDB-GENE-030826-28]
95. CT573356.3 CT573356.3 2 1 - - - - - - 1.000 - -
96. si:ch73-386o14.1 si:ch73-386o14.1 82 1 1.000 - - - - - - - -
97. si:rp71-36a1.1 ENSDARG00000095295 13 1 1.000 - - - - - - - - si:rp71-36a1.1 [Source:ZFIN;Acc:ZDB-GENE-050208-407]
98. ncaldb ENSDARG00000011334 123 1 1.000 - - - - - - - - neurocalcin delta b [Source:ZFIN;Acc:ZDB-GENE-040808-37]
99. ccdc37 ccdc37 36 1 1.000 - - - - - - - -
100. bcl11ba ENSDARG00000062510 169 1 1.000 - - - - - - - - B cell CLL/lymphoma 11Ba [Source:ZFIN;Acc:ZDB-GENE-061207-62]

There are 1087 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA