Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for pdcd5

Gene Name Gene ID Reads Annotation
pdcd5 ENSDARG00000026072 3135 programmed cell death 5 [Source:ZFIN;Acc:ZDB-GENE-040426-980]










Genes with expression patterns similar to pdcd5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pdcd5 ENSDARG00000026072 3135 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 programmed cell death 5 [Source:ZFIN;Acc:ZDB-GENE-040426-980]
2. naa15a ENSDARG00000003213 5889 2.548 - - - - 0.971 0.779 0.798 - - N(alpha)-acetyltransferase 15, NatA auxiliary subunit a [Source:ZFIN;Acc:ZDB-GENE-030131-2392]
3. mibp2 ENSDARG00000101844 17444 2.511 0.784 0.974 - - - 0.753 - - - muscle-specific beta 1 integrin binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-031113-14]
4. acap3a ENSDARG00000075990 9652 2.456 - 0.982 - - - 0.735 0.739 - - ArfGAP with coiled-coil, ankyrin repeat and PH domains 3a [Source:ZFIN;Acc:ZDB-GENE-030131-1711]
5. znf865 ENSDARG00000036698 15532 2.454 - - - - 0.893 0.854 0.707 - - zinc finger protein 865 [Source:ZFIN;Acc:ZDB-GENE-060503-896]
6. myom1a ENSDARG00000061249 10230 2.452 - 0.974 - - - 0.703 0.775 - - myomesin 1a (skelemin) [Source:ZFIN;Acc:ZDB-GENE-030131-2856]
7. eif3ha ENSDARG00000102452 9238 2.435 - 0.968 - - - 0.730 0.737 - - eukaryotic translation initiation factor 3, subunit H, a [Source:ZFIN;Acc:ZDB-GENE-040808-19]
8. tmem182 tmem182 12589 2.435 - 0.921 - - - 0.728 0.786 - -
9. zgc:193541 ENSDARG00000092873 21276 2.419 - 0.839 - - - 0.749 0.831 - - zgc:193541 [Source:ZFIN;Acc:ZDB-GENE-081022-15]
10. atp5e 14858 2.419 - 0.830 - - - - 0.839 - 0.750 ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit
11. cyc1 ENSDARG00000038075 16699 2.37 - 0.814 - - - 0.835 0.721 - - cytochrome c-1 [Source:ZFIN;Acc:ZDB-GENE-031105-2]
12. NRAP ENSDARG00000009341 3565 2.351 0.798 - - - - 0.716 0.837 - - nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
13. tgm2a ENSDARG00000070157 4516 2.294 0.783 - - - - 0.727 0.784 - - transglutaminase 2, C polypeptide A [Source:ZFIN;Acc:ZDB-GENE-040912-78]
14. ndufab1a ENSDARG00000058463, ENSDARG00000112762 11317 2.263 0.755 - - - - 0.747 0.761 - - NADH:ubiquinone oxidoreductase subunit AB1a [Source:ZFIN;Acc:ZDB-GENE-040801-1]
15. mdh2 ENSDARG00000043371 14485 2.262 0.720 - - - - - 0.839 - 0.703 malate dehydrogenase 2, NAD (mitochondrial) [Source:ZFIN;Acc:ZDB-GENE-040426-2143]
16. pfkmb ENSDARG00000060797, ENSDARG00000109412, ENSDARG00000109653, ENSDARG00000115422 3323 2.26 0.740 - - - - 0.735 0.785 - - phosphofructokinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-081114-1]
17. tns1 tns1 5891 2.257 0.715 - - - 0.842 - 0.700 - -
18. FHOD3_1 FHOD3_1 983 2.215 0.747 - - - - 0.744 0.724 - -
19. ITGB1BP2 ENSDARG00000030176 2472 2.209 0.784 - - - - 0.707 0.718 - - integrin subunit beta 1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:6154]
20. ndufab1b ENSDARG00000014915 12796 2.208 0.702 - - - 0.754 - 0.752 - - NADH:ubiquinone oxidoreductase subunit AB1b [Source:ZFIN;Acc:ZDB-GENE-030131-4437]
21. pabpc4 ENSDARG00000059259, ENSDARG00000111312 2392 2.163 0.712 - - - - 0.747 0.704 - - poly(A) binding protein, cytoplasmic 4 (inducible form) [Source:ZFIN;Acc:ZDB-GENE-030131-9663]
22. ldb3a ENSDARG00000056322, ENSDARG00000116388 2569 2.152 0.711 - - - - 0.711 0.730 - - LIM domain binding 3a [Source:ZFIN;Acc:ZDB-GENE-040121-6]
23. sar1ab ENSDARG00000033320 3984 1.82 - 0.991 - - - - 0.829 - - secretion associated, Ras related GTPase 1Ab [Source:ZFIN;Acc:ZDB-GENE-050417-437]
24. vbp1 ENSDARG00000030241 10619 1.79 - - - - 0.957 0.833 - - - von Hippel-Lindau binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050522-494]
25. ndufa11 ENSDARG00000042777 2757 1.789 - - - - 0.957 - 0.832 - - NADH:ubiquinone oxidoreductase subunit A11 [Source:ZFIN;Acc:ZDB-GENE-040426-1631]
26. nxf1 ENSDARG00000055076 3251 1.776 - - - - 0.956 - 0.820 - - nuclear RNA export factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2585]
27. eif4a1b ENSDARG00000003032, ENSDARG00000116907 14301 1.764 - 0.978 - - - 0.786 - - - eukaryotic translation initiation factor 4A1B [Source:ZFIN;Acc:ZDB-GENE-040120-6]
28. st8sia6 ENSDARG00000021195 2244 1.758 - - - - 0.978 - 0.780 - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 [Source:ZFIN;Acc:ZDB-GENE-060322-9]
29. hhatlb ENSDARG00000005139 6674 1.755 0.763 0.992 - - - - - - - hedgehog acyltransferase like, b [Source:ZFIN;Acc:ZDB-GENE-050506-130]
30. TRAPPC10 ENSDARG00000098118 954 1.731 - - - - 0.959 0.772 - - - trafficking protein particle complex 10 [Source:ZFIN;Acc:ZDB-GENE-131115-1]
31. matr3l1.1 ENSDARG00000000394, ENSDARG00000001162 3757 1.728 - 0.992 - - - 0.736 - - - matrin 3-like 1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-40]
32. mrpl14 ENSDARG00000068886 1991 1.726 - 0.995 - - - - 0.731 - - mitochondrial ribosomal protein L14 [Source:ZFIN;Acc:ZDB-GENE-040426-1066]
33. pacsin3 ENSDARG00000099339 4668 1.72 - 0.835 - - 0.885 - - - - protein kinase C and casein kinase substrate in neurons 3 [Source:ZFIN;Acc:ZDB-GENE-040426-984]
34. kctd6b ENSDARG00000023703, ENSDARG00000116734 2621 1.718 - 0.993 - - - - 0.725 - - potassium channel tetramerization domain containing 6b [Source:ZFIN;Acc:ZDB-GENE-040718-14]
35. kpna5 ENSDARG00000042030 1643 1.714 - 0.995 - - - - 0.719 - - karyopherin alpha 5 (importin alpha 6) [Source:ZFIN;Acc:ZDB-GENE-050522-22]
36. eng1b eng1b 2544 1.712 0.750 - - - 0.962 - - - -
37. smarce1 ENSDARG00000016871 9628 1.707 - 0.986 - - - 0.721 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-967]
38. setbp1 ENSDARG00000093799 4499 1.707 - 0.994 - - - 0.713 - - - SET binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060526-72]
39. cox7c ENSDARG00000104537 12169 1.706 - - - - 0.857 - 0.849 - - cytochrome c oxidase subunit 7C [Source:ZFIN;Acc:ZDB-GENE-030131-8062]
40. atp5g3a 9539 1.705 - - - - 0.920 - 0.785 - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9), genome duplicate a
41. srpk1b ENSDARG00000031560 2079 1.703 - - - - 0.941 - 0.762 - - SRSF protein kinase 1b [Source:ZFIN;Acc:ZDB-GENE-070112-2292]
42. ndufb3 ENSDARG00000075709 6609 1.702 - 0.924 - - - - 0.778 - - NADH:ubiquinone oxidoreductase subunit B3 [Source:ZFIN;Acc:ZDB-GENE-091204-407]
43. mrps18a ENSDARG00000024465 5187 1.701 - 0.985 - - - 0.716 - - - mitochondrial ribosomal protein S18A [Source:ZFIN;Acc:ZDB-GENE-041210-109]
44. C2H1orf123 C2H1orf123 2344 1.699 - - - - 0.942 - 0.757 - -
45. med13b ENSDARG00000003910 1143 1.699 - - - - 0.966 0.733 - - - mediator complex subunit 13b [Source:ZFIN;Acc:ZDB-GENE-030131-3529]
46. tufm ENSDARG00000104173 9292 1.691 - 0.943 - - - - 0.748 - - Tu translation elongation factor, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-050320-73]
47. spag7 ENSDARG00000011555 3224 1.686 - - - - 0.966 - 0.720 - - sperm associated antigen 7 [Source:ZFIN;Acc:ZDB-GENE-040426-1632]
48. UNKL ENSDARG00000037838 1086 1.684 - - - - 0.938 0.746 - - - unkempt family zinc finger-like [Source:ZFIN;Acc:ZDB-GENE-131120-196]
49. mrps33 ENSDARG00000020015 3551 1.678 - - - - 0.947 - - 0.731 - mitochondrial ribosomal protein S33 [Source:ZFIN;Acc:ZDB-GENE-040715-6]
50. serbp1a_1 ENSDARG00000074242 13588 1.676 - 0.969 - - - - 0.707 - - SERPINE1 mRNA binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7389]
51. eif2s1b ENSDARG00000052178 11961 1.672 - - - - 0.816 - 0.856 - - eukaryotic translation initiation factor 2, subunit 1 alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-283]
52. psmc5 ENSDARG00000015315 8458 1.659 - - - - 0.954 0.705 - - - proteasome 26S subunit, ATPase 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6547]
53. GRAMD4 GRAMD4 1967 1.658 0.701 - - - 0.957 - - - -
54. ddx1 ENSDARG00000032117 1295 1.657 - - - - 0.957 - 0.700 - - DEAD (Asp-Glu-Ala-Asp) box helicase 1 [Source:ZFIN;Acc:ZDB-GENE-041001-215]
55. tomm22 ENSDARG00000045146, ENSDARG00000109761 3545 1.656 - - - - 0.955 - 0.701 - - translocase of outer mitochondrial membrane 22 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-9810]
56. C24H17orf96 C24H17orf96 1538 1.649 - - - - 0.942 0.707 - - -
57. txlnbb ENSDARG00000076241 6396 1.636 0.826 - - - - - 0.810 - - taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
58. sptb ENSDARG00000030490 7128 1.634 0.864 - - - - - 0.770 - - spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
59. ndufs1 ENSDARG00000028546 5795 1.633 0.804 - - - - - 0.829 - - NADH:ubiquinone oxidoreductase core subunit S1 [Source:ZFIN;Acc:ZDB-GENE-030131-478]
60. timm17a ENSDARG00000029510, ENSDARG00000115486 4295 1.631 - - - - 0.901 - 0.730 - - translocase of inner mitochondrial membrane 17 homolog A (yeast) [Source:ZFIN;Acc:ZDB-GENE-031030-6]
61. ndufa8 ENSDARG00000058041, ENSDARG00000111900 5493 1.625 - - - - 0.871 - 0.754 - - NADH:ubiquinone oxidoreductase subunit A8 [Source:ZFIN;Acc:ZDB-GENE-040426-1688]
62. MUSTN1 MUSTN1 1882 1.623 0.853 - - - - - 0.770 - -
63. sh3bgr ENSDARG00000021633 3498 1.622 0.813 - - - - - 0.809 - - SH3 domain binding glutamate-rich protein [Source:ZFIN;Acc:ZDB-GENE-040801-27]
64. parvb ENSDARG00000019117 1042 1.621 0.813 - - - - - 0.808 - - parvin, beta [Source:ZFIN;Acc:ZDB-GENE-030131-4411]
65. eif4e2 ENSDARG00000038585 2116 1.615 0.832 - - - - - 0.783 - - eukaryotic translation initiation factor 4E family member 2 [Source:ZFIN;Acc:ZDB-GENE-050327-59]
66. acsl1 acsl1 4216 1.614 - - - - - 0.709 0.905 - -
67. asb5b ENSDARG00000053222 1207 1.612 0.835 - - - - - 0.777 - - ankyrin repeat and SOCS box containing 5b [Source:ZFIN;Acc:ZDB-GENE-050417-271]
68. si:ch211-156j16.1 ENSDARG00000092035 7441 1.611 0.818 - - - - - 0.793 - - si:ch211-156j16.1 [Source:ZFIN;Acc:ZDB-GENE-030131-4106]
69. pvalb4 ENSDARG00000024433 35736 1.61 0.835 - - - - - 0.775 - - parvalbumin 4 [Source:ZFIN;Acc:ZDB-GENE-040625-48]
70. prx ENSDARG00000017246 6183 1.603 0.785 - - - - - 0.818 - - periaxin [Source:ZFIN;Acc:ZDB-GENE-030131-5790]
71. ttyh2 ENSDARG00000016934 1868 1.603 - - - - 0.875 0.728 - - - tweety family member 2 [Source:ZFIN;Acc:ZDB-GENE-040718-193]
72. casq1b ENSDARG00000018105 2643 1.601 0.843 - - - - - 0.758 - - calsequestrin 1b [Source:ZFIN;Acc:ZDB-GENE-060929-1070]
73. abce1 ENSDARG00000007216 7502 1.6 - - - - 0.849 - 0.751 - - ATP-binding cassette, sub-family E (OABP), member 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1995]
74. smndc1 ENSDARG00000056235, ENSDARG00000117084 3509 1.594 - - - - 0.869 0.725 - - - survival motor neuron domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-614]
75. PHB2 PHB2 3755 1.594 0.850 - - - - - 0.744 - -
76. zgc:92518 ENSDARG00000016343 3837 1.593 0.789 - - - - - 0.804 - - zgc:92518 [Source:ZFIN;Acc:ZDB-GENE-040718-53]
77. nid1a ENSDARG00000068710 3948 1.591 - - - - - 0.778 0.813 - - nidogen 1a [Source:ZFIN;Acc:ZDB-GENE-050302-58]
78. C13H10orf71 3489 1.59 0.833 - - - - - 0.757 - - chromosome 13 C10orf71 homolog
79. murcb murcb 13655 1.59 0.815 - - - - - 0.775 - -
80. BX294434.1 ENSDARG00000061272 6493 1.587 0.785 - - - - - 0.802 - - solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
81. cd82a ENSDARG00000019098 6761 1.587 - 0.838 - - - 0.749 - - - CD82 molecule a [Source:ZFIN;Acc:ZDB-GENE-030131-2818]
82. psmb3 ENSDARG00000013938 10744 1.586 - 0.827 - - - 0.759 - - - proteasome subunit beta 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2682]
83. PTPLA PTPLA 4044 1.585 0.794 - - - - - 0.791 - -
84. klhl41b ENSDARG00000006757 10762 1.58 0.801 - - - - - 0.779 - - kelch-like family member 41b [Source:ZFIN;Acc:ZDB-GENE-030131-9875]
85. psmd13 ENSDARG00000016239 4229 1.58 - - - - - 0.745 0.835 - - proteasome 26S subunit, non-ATPase 13 [Source:ZFIN;Acc:ZDB-GENE-040426-1004]
86. efemp2a ENSDARG00000094324 39261 1.579 0.776 - - - - - 0.803 - - EGF containing fibulin extracellular matrix protein 2a [Source:ZFIN;Acc:ZDB-GENE-041212-8]
87. C1QBP ENSDARG00000039887 11186 1.579 0.771 - - - - - 0.808 - - complement component 1, q subcomponent binding protein [Source:ZFIN;Acc:ZDB-GENE-050417-408]
88. MYOM1 MYOM1 3870 1.578 0.755 - - - - - 0.823 - -
89. eno1a ENSDARG00000022456, ENSDARG00000116458 14401 1.575 0.767 - - - - - 0.808 - - enolase 1a, (alpha) [Source:ZFIN;Acc:ZDB-GENE-030131-6048]
90. tnnt2c ENSDARG00000032242 28801 1.575 0.768 - - - - - 0.807 - - troponin T2c, cardiac [Source:ZFIN;Acc:ZDB-GENE-030520-1]
91. myod1 ENSDARG00000030110 6019 1.573 - - - - - 0.779 0.794 - - myogenic differentiation 1 [Source:ZFIN;Acc:ZDB-GENE-980526-561]
92. opa1_1 ENSDARG00000070801 1424 1.571 0.832 - - - - 0.739 - - - optic atrophy 1 (autosomal dominant) [Source:ZFIN;Acc:ZDB-GENE-041114-7]
93. trim55a ENSDARG00000029596 2858 1.57 0.796 - - - - - 0.774 - - tripartite motif containing 55a [Source:ZFIN;Acc:ZDB-GENE-040718-50]
94. si:ch211-242b18.1 ENSDARG00000054723 2929 1.566 0.746 - - - - - 0.820 - - si:ch211-242b18.1 [Source:ZFIN;Acc:ZDB-GENE-030131-1518]
95. si:dkey-181m9.5 si:dkey-181m9.5 1079 1.565 0.826 - - - - - 0.739 - -
96. ndufs3 ENSDARG00000015385 7790 1.565 0.701 0.864 - - - - - - - NADH:ubiquinone oxidoreductase core subunit S3 [Source:ZFIN;Acc:ZDB-GENE-050417-274]
97. pbxip1a ENSDARG00000071015 4960 1.563 0.773 - - - - - 0.790 - - pre-B-cell leukemia homeobox interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-060503-871]
98. atp1b3b ENSDARG00000042837 5163 1.561 - - - - - 0.763 0.798 - - ATPase Na+/K+ transporting subunit beta 3b [Source:ZFIN;Acc:ZDB-GENE-001127-1]
99. si:ch211-85n16.3 ENSDARG00000096346 1095 1.561 0.809 - - - - - 0.752 - - si:ch211-85n16.3 [Source:ZFIN;Acc:ZDB-GENE-120215-137]
100. cap2 ENSDARG00000104478 3266 1.56 0.821 - - - - - 0.739 - - CAP, adenylate cyclase-associated protein, 2 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1758]

There are 1268 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA