Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for pdcd4b

Gene Name Gene ID Reads Annotation
pdcd4b ENSDARG00000041022, ENSDARG00000111385, ENSDARG00000112429 528 programmed cell death 4b [Source:ZFIN;Acc:ZDB-GENE-030131-9847]










Genes with expression patterns similar to pdcd4b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pdcd4b ENSDARG00000041022, ENSDARG00000111385, ENSDARG00000112429 528 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 programmed cell death 4b [Source:ZFIN;Acc:ZDB-GENE-030131-9847]
2. cmtm6 ENSDARG00000099631 641 2.261 0.786 0.755 - 0.720 - - - - - CKLF-like MARVEL transmembrane domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-030729-15]
3. UBE2S ENSDARG00000031775, ENSDARG00000114827 1890 1.644 0.825 - - - - - 0.819 - - ubiquitin-conjugating enzyme E2S [Source:ZFIN;Acc:ZDB-GENE-050913-92]
4. zgc:194679 ENSDARG00000073723 1396 1.631 0.845 - - 0.786 - - - - - zgc:194679 [Source:ZFIN;Acc:ZDB-GENE-030131-2847]
5. C11H19orf25 C11H19orf25 491 1.623 0.864 - - 0.759 - - - - -
6. lztr1 ENSDARG00000015905, ENSDARG00000114621 632 1.613 0.803 - - - - - 0.810 - - leucine-zipper-like transcription regulator 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9564]
7. gstt1b ENSDARG00000017388, ENSDARG00000112401 2107 1.571 0.827 - - - - - 0.744 - - glutathione S-transferase theta 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1491]
8. mpv17l2 ENSDARG00000056367, ENSDARG00000112107 352 1.546 0.723 - - - - - 0.823 - - MPV17 mitochondrial membrane protein-like 2 [Source:ZFIN;Acc:ZDB-GENE-040718-306]
9. map2k1 ENSDARG00000007825 373 1.522 0.811 - - - - 0.711 - - - mitogen-activated protein kinase kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2759]
10. camk2n1a ENSDARG00000025855 1467 1.521 0.780 - - - - - 0.741 - - calcium/calmodulin-dependent protein kinase II inhibitor 1a [Source:ZFIN;Acc:ZDB-GENE-050522-319]
11. si:dkeyp-113d7.10 ENSDARG00000092359 1585 1.491 - 0.790 - - - - - - 0.701 si:dkeyp-113d7.10 [Source:ZFIN;Acc:ZDB-GENE-061207-80]
12. ccdc173 ENSDARG00000077928 260 1.482 - - - 0.732 0.750 - - - - coiled-coil domain containing 173 [Source:ZFIN;Acc:ZDB-GENE-081104-457]
13. dnajc25 ENSDARG00000067613, ENSDARG00000111375 1435 1.451 - - - 0.735 - - 0.716 - - DnaJ (Hsp40) homolog, subfamily C , member 25 [Source:ZFIN;Acc:ZDB-GENE-081104-137]
14. atrnl1b ENSDARG00000006420 641 1.448 - - - 0.722 - - 0.726 - - attractin-like 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8092]
15. otud5a ENSDARG00000059006 2073 1.444 0.742 - - - - 0.702 - - - OTU deubiquitinase 5a [Source:ZFIN;Acc:ZDB-GENE-030616-61]
16. znhit2 ENSDARG00000030805 197 1.442 - 0.701 - 0.741 - - - - - zinc finger, HIT-type containing 2 [Source:ZFIN;Acc:ZDB-GENE-061103-46]
17. CABZ01038514.1 CABZ01038514.1 724 1.438 - - - 0.735 - - 0.703 - -
18. polr2d ENSDARG00000076509 3386 1.432 0.727 - - - - - - - 0.705 polymerase (RNA) II (DNA directed) polypeptide D [Source:ZFIN;Acc:ZDB-GENE-040714-2]
19. copz2 ENSDARG00000006786, ENSDARG00000112084 4375 1.42 0.707 - - - - - 0.713 - - coatomer protein complex, subunit zeta 2 [Source:ZFIN;Acc:ZDB-GENE-000406-5]
20. SPEN ENSDARG00000074245, ENSDARG00000116696 1412 1.417 - 0.708 - 0.709 - - - - - spen family transcriptional repressor [Source:ZFIN;Acc:ZDB-GENE-050309-70]
21. si:ch211-120j21.1 si:ch211-120j21.1 638 0.914 0.914 - - - - - - - -
22. phf20b ENSDARG00000038737, ENSDARG00000111662, ENSDARG00000116554 1385 0.911 0.911 - - - - - - - - PHD finger protein 20, b [Source:ZFIN;Acc:ZDB-GENE-040822-33]
23. CLDN10_1 CLDN10_1 71 0.909 0.909 - - - - - - - -
24. gpcpd1 ENSDARG00000016011 2563 0.907 0.907 - - - - - - - - glycerophosphocholine phosphodiesterase 1 [Source:ZFIN;Acc:ZDB-GENE-060503-472]
25. tax1bp3 ENSDARG00000059177 4324 0.902 0.902 - - - - - - - - Tax1 (human T-cell leukemia virus type I) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2830]
26. si:ch211-93f2.1 ENSDARG00000101726, ENSDARG00000104818 708 0.901 0.901 - - - - - - - - si:ch211-93f2.1 [Source:ZFIN;Acc:ZDB-GENE-041014-96]
27. tuft1a ENSDARG00000061242, ENSDARG00000115368 330 0.9 - 0.900 - - - - - - - tuftelin 1a [Source:ZFIN;Acc:ZDB-GENE-061103-184]
28. AKT3 AKT3 1729 0.892 - 0.892 - - - - - - -
29. mat2al ENSDARG00000063665, ENSDARG00000109637, ENSDARG00000111463 447 0.892 0.892 - - - - - - - - methionine adenosyltransferase II, alpha-like [Source:ZFIN;Acc:ZDB-GENE-060421-5255]
30. myo1c myo1c 4978 0.891 0.891 - - - - - - - -
31. sh3yl1 ENSDARG00000074393 815 0.889 0.889 - - - - - - - - SH3 and SYLF domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040128-16]
32. kifc3 ENSDARG00000054978 1220 0.889 0.889 - - - - - - - - kinesin family member C3 [Source:ZFIN;Acc:ZDB-GENE-030131-3724]
33. ret ENSDARG00000055305 700 0.885 0.885 - - - - - - - - ret proto-oncogene receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-980526-307]
34. slc30a9 ENSDARG00000057272 766 0.883 - - - - - - 0.883 - - solute carrier family 30 (zinc transporter), member 9 [Source:ZFIN;Acc:ZDB-GENE-040724-254]
35. prdm9 ENSDARG00000005382, ENSDARG00000110150 572 0.882 0.882 - - - - - - - - PR domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-040426-1319]
36. efnb2b ENSDARG00000074050 77 0.88 0.880 - - - - - - - - ephrin-B2b [Source:ZFIN;Acc:ZDB-GENE-010618-1]
37. zgc:56585 ENSDARG00000026236 704 0.879 0.879 - - - - - - - - zgc:56585 [Source:ZFIN;Acc:ZDB-GENE-040426-1084]
38. RNF169 ENSDARG00000042825 727 0.879 - - - 0.879 - - - - - ring finger protein 169 [Source:ZFIN;Acc:ZDB-GENE-030131-4336]
39. cald1 cald1 147 0.874 - 0.874 - - - - - - -
40. C3H16orf72 C3H16orf72 2059 0.873 0.873 - - - - - - - -
41. pcnxl3 pcnxl3 756 0.869 0.869 - - - - - - - -
42. map3k7 ENSDARG00000020469 2845 0.869 0.869 - - - - - - - - mitogen-activated protein kinase kinase kinase 7 [Source:ZFIN;Acc:ZDB-GENE-041001-135]
43. ef1 1343 0.869 0.869 - - - - - - - - E74-like factor 1 (ets domain transcription factor), transcript variant X4
44. si:dkey-238o13.4 ENSDARG00000078847 884 0.869 0.869 - - - - - - - - si:dkey-238o13.4 [Source:ZFIN;Acc:ZDB-GENE-070705-403]
45. cd82b ENSDARG00000026070 638 0.868 - - - - - - 0.868 - - CD82 molecule b [Source:ZFIN;Acc:ZDB-GENE-030131-2857]
46. sorbs2a ENSDARG00000003046 242 0.867 - - - 0.867 - - - - - sorbin and SH3 domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-070308-2]
47. gna13b ENSDARG00000037924 1963 0.867 - - - 0.867 - - - - - guanine nucleotide binding protein (G protein), alpha 13b [Source:ZFIN;Acc:ZDB-GENE-030131-8277]
48. iah1 ENSDARG00000015765 326 0.867 0.867 - - - - - - - - isoamyl acetate hydrolyzing esterase 1 (putative) [Source:ZFIN;Acc:ZDB-GENE-041008-186]
49. selk 954 0.866 0.866 - - - - - - - - selenoprotein K
50. terfa ENSDARG00000039302 779 0.865 0.865 - - - - - - - - telomeric repeat binding factor a [Source:ZFIN;Acc:ZDB-GENE-020419-38]
51. nme3 ENSDARG00000100990 3889 0.864 0.864 - - - - - - - - NME/NM23 nucleoside diphosphate kinase 3 [Source:ZFIN;Acc:ZDB-GENE-000210-34]
52. etfa ENSDARG00000101631 2946 0.863 0.863 - - - - - - - - electron transfer flavoprotein subunit alpha [Source:ZFIN;Acc:ZDB-GENE-030131-4449]
53. sec22a ENSDARG00000078328 1207 0.86 0.860 - - - - - - - - SEC22 homolog A, vesicle trafficking protein [Source:ZFIN;Acc:ZDB-GENE-030131-3553]
54. tm9sf3 ENSDARG00000028748, ENSDARG00000111288 4546 0.86 0.860 - - - - - - - - transmembrane 9 superfamily member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2714]
55. acsl5 ENSDARG00000075931 880 0.86 0.860 - - - - - - - - acyl-CoA synthetase long chain family member 5 [Source:ZFIN;Acc:ZDB-GENE-040912-169]
56. grp ENSDARG00000043074 747 0.859 0.859 - - - - - - - - gastrin-releasing peptide [Source:ZFIN;Acc:ZDB-GENE-060526-117]
57. wu:fc34e06 1793 0.859 0.859 - - - - - - - - wu:fc34e06, transcript variant X10
58. zgc:162946 zgc:162946 74 0.858 0.858 - - - - - - - -
59. SHC3 ENSDARG00000098909 332 0.858 - - - 0.858 - - - - - SHC adaptor protein 3 [Source:HGNC Symbol;Acc:HGNC:18181]
60. synj2bp ENSDARG00000028321 1143 0.857 0.857 - - - - - - - - synaptojanin 2 binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-6531]
61. zgc:66475 ENSDARG00000099519 1348 0.857 0.857 - - - - - - - - zgc:66475 [Source:ZFIN;Acc:ZDB-GENE-040426-1644]
62. spag7 ENSDARG00000011555 3224 0.856 - - - 0.856 - - - - - sperm associated antigen 7 [Source:ZFIN;Acc:ZDB-GENE-040426-1632]
63. pcyt1bb ENSDARG00000104207 1204 0.856 0.856 - - - - - - - - phosphate cytidylyltransferase 1, choline, beta b [Source:ZFIN;Acc:ZDB-GENE-051120-48]
64. lyrm4 ENSDARG00000078352 2245 0.855 0.855 - - - - - - - - LYR motif containing 4 [Source:ZFIN;Acc:ZDB-GENE-081104-295]
65. pnkp ENSDARG00000100455, ENSDARG00000114060 1475 0.854 - - - 0.854 - - - - - polynucleotide kinase 3'-phosphatase [Source:ZFIN;Acc:ZDB-GENE-061013-433]
66. si:ch211-218c6.8 ENSDARG00000092364 1270 0.854 0.854 - - - - - - - - si:ch211-218c6.8 [Source:ZFIN;Acc:ZDB-GENE-050419-103]
67. ubtf ENSDARG00000035066 4070 0.853 - - - 0.853 - - - - - upstream binding transcription factor [Source:ZFIN;Acc:ZDB-GENE-030616-252]
68. slc30a8 ENSDARG00000100917 761 0.853 0.853 - - - - - - - - solute carrier family 30 (zinc transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-060315-10]
69. bag1 ENSDARG00000020895 1660 0.852 0.852 - - - - - - - - BCL2 associated athanogene 1 [Source:ZFIN;Acc:ZDB-GENE-050309-89]
70. ankrd6b ENSDARG00000029370 429 0.851 - 0.851 - - - - - - - ankyrin repeat domain 6b [Source:ZFIN;Acc:ZDB-GENE-030916-4]
71. ankrd10b ENSDARG00000004771 654 0.851 0.851 - - - - - - - - ankyrin repeat domain 10b [Source:ZFIN;Acc:ZDB-GENE-061013-49]
72. rhov ENSDARG00000070434 808 0.85 0.850 - - - - - - - - ras homolog family member V [Source:ZFIN;Acc:ZDB-GENE-031002-10]
73. BX548078.1 ENSDARG00000093780 1325 0.849 0.849 - - - - - - - -
74. alad ENSDARG00000100372 1711 0.846 0.846 - - - - - - - - aminolevulinate dehydratase [Source:ZFIN;Acc:ZDB-GENE-050417-123]
75. C6H1orf159 C6H1orf159 406 0.846 - 0.846 - - - - - - -
76. bcl2l1 ENSDARG00000008434 1956 0.845 0.845 - - - - - - - - bcl2-like 1 [Source:ZFIN;Acc:ZDB-GENE-010730-1]
77. tiam1a ENSDARG00000078430 2482 0.843 0.843 - - - - - - - - T cell lymphoma invasion and metastasis 1a [Source:ZFIN;Acc:ZDB-GENE-080325-1]
78. sox4a ENSDARG00000004588, ENSDARG00000096389 2213 0.843 0.843 - - - - - - - - SRY (sex determining region Y)-box 4a [Source:ZFIN;Acc:ZDB-GENE-030131-8290]
79. dyrk1ab ENSDARG00000023814 1769 0.843 0.843 - - - - - - - - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A, b [Source:ZFIN;Acc:ZDB-GENE-030131-5677]
80. mir203b 1077 0.843 0.843 - - - - - - - - microRNA 203b
81. TRIM14 TRIM14 1424 0.841 0.841 - - - - - - - -
82. ttll4 ENSDARG00000078935 1663 0.841 0.841 - - - - - - - - tubulin tyrosine ligase-like family, member 4 [Source:ZFIN;Acc:ZDB-GENE-070912-313]
83. tspan18b ENSDARG00000015015 1433 0.84 0.840 - - - - - - - - tetraspanin 18b [Source:ZFIN;Acc:ZDB-GENE-040718-137]
84. st8sia6 ENSDARG00000021195 2244 0.839 0.839 - - - - - - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 [Source:ZFIN;Acc:ZDB-GENE-060322-9]
85. ERO1LB ERO1LB 1433 0.838 0.838 - - - - - - - -
86. sema3d ENSDARG00000017369 212 0.838 0.838 - - - - - - - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D [Source:ZFIN;Acc:ZDB-GENE-990715-2]
87. sec13 ENSDARG00000054807, ENSDARG00000109318, ENSDARG00000110540 470 0.837 - - - - - 0.837 - - - SEC13 homolog, nuclear pore and COPII coat complex component [Source:ZFIN;Acc:ZDB-GENE-040426-2649]
88. wnt10a ENSDARG00000017155 491 0.836 0.836 - - - - - - - - wingless-type MMTV integration site family, member 10a [Source:ZFIN;Acc:ZDB-GENE-990415-278]
89. ACOT12 ENSDARG00000054534 61 0.835 0.835 - - - - - - - - acyl-CoA thioesterase 12 [Source:HGNC Symbol;Acc:HGNC:24436]
90. MRPL52 ENSDARG00000090568 4402 0.835 0.835 - - - - - - - - mitochondrial ribosomal protein L52 [Source:ZFIN;Acc:ZDB-GENE-110325-1]
91. mto1 ENSDARG00000055679 859 0.833 0.833 - - - - - - - - mitochondrial tRNA translation optimization 1 [Source:ZFIN;Acc:ZDB-GENE-070209-253]
92. arhgef18a ENSDARG00000011157 1702 0.833 0.833 - - - - - - - - rho/rac guanine nucleotide exchange factor (GEF) 18a [Source:ZFIN;Acc:ZDB-GENE-040516-14]
93. psme1 ENSDARG00000002165, ENSDARG00000115834 72 0.832 0.832 - - - - - - - - proteasome activator subunit 1 [Source:ZFIN;Acc:ZDB-GENE-991110-17]
94. si:dkeyp-99c4.4 si:dkeyp-99c4.4 31 0.832 0.832 - - - - - - - -
95. trim25l ENSDARG00000020863 292 0.832 0.832 - - - - - - - - tripartite motif containing 25, like [Source:ZFIN;Acc:ZDB-GENE-040914-87]
96. si:ch211-157l15.4 si:ch211-157l15.4 92 0.832 0.832 - - - - - - - -
97. TDG TDG 1191 0.832 - - - 0.832 - - - - -
98. akr1a1a ENSDARG00000035257, ENSDARG00000109404 548 0.832 0.832 - - - - - - - - aldo-keto reductase family 1, member A1a (aldehyde reductase) [Source:ZFIN;Acc:ZDB-GENE-040808-44]
99. arhgap19 ENSDARG00000083189 210 0.832 0.832 - - - - - - - - Rho GTPase activating protein 19 [Source:ZFIN;Acc:ZDB-GENE-100922-157]
100. si:ch211-270n8.3 87 0.832 0.832 - - - - - - - - si:ch211-270n8.3, transcript variant X2

There are 761 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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