Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for pdcd4a

Gene Name Gene ID Reads Annotation
pdcd4a ENSDARG00000021702 7293 programmed cell death 4a [Source:ZFIN;Acc:ZDB-GENE-040426-1920]










Genes with expression patterns similar to pdcd4a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pdcd4a ENSDARG00000021702 7293 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 programmed cell death 4a [Source:ZFIN;Acc:ZDB-GENE-040426-1920]
2. arl6ip1 ENSDARG00000054578, ENSDARG00000112340 11714 3.113 - - - - - 0.748 0.819 0.799 0.747 ADP-ribosylation factor-like 6 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1087]
3. ndufa10 ENSDARG00000013333 6597 2.667 - 0.841 - 0.990 - 0.836 - - - NADH:ubiquinone oxidoreductase subunit A10 [Source:ZFIN;Acc:ZDB-GENE-030131-670]
4. vapb ENSDARG00000070435, ENSDARG00000112097 6469 2.592 - - 0.766 - - - 0.884 - 0.942 VAMP (vesicle-associated membrane protein)-associated protein B and C [Source:ZFIN;Acc:ZDB-GENE-030131-2348]
5. cox6c ENSDARG00000038577 16845 2.537 - - - 0.917 - 0.771 0.849 - - cytochrome c oxidase subunit 6C [Source:ZFIN;Acc:ZDB-GENE-040724-95]
6. myod1 ENSDARG00000030110 6019 2.518 - - - - - 0.763 0.867 0.888 - myogenic differentiation 1 [Source:ZFIN;Acc:ZDB-GENE-980526-561]
7. grsf1 ENSDARG00000053021 2752 2.495 - 0.748 - - - - 0.810 - 0.937 G-rich RNA sequence binding factor 1 [Source:ZFIN;Acc:ZDB-GENE-060825-196]
8. ndufab1b ENSDARG00000014915 12796 2.477 - 0.777 - - - - 0.766 - 0.934 NADH:ubiquinone oxidoreductase subunit AB1b [Source:ZFIN;Acc:ZDB-GENE-030131-4437]
9. sra1 ENSDARG00000053619 2799 2.475 - - - - - - 0.707 0.873 0.895 steroid receptor RNA activator 1 [Source:ZFIN;Acc:ZDB-GENE-040625-6]
10. higd2a ENSDARG00000052371 7354 2.458 - 0.829 - - - - 0.747 0.882 - HIG1 hypoxia inducible domain family, member 2A [Source:ZFIN;Acc:ZDB-GENE-050417-119]
11. si:ch1073-325m22.2 ENSDARG00000095921 8534 2.425 - 0.882 - - - 0.741 0.802 - - si:ch1073-325m22.2 [Source:NCBI gene;Acc:100333135]
12. cycsb ENSDARG00000044562 40227 2.4 - - - - - 0.885 0.754 - 0.761 cytochrome c, somatic b [Source:ZFIN;Acc:ZDB-GENE-040625-38]
13. rab5if ENSDARG00000074790 8807 2.355 - 0.748 - - - 0.758 0.849 - - RAB5 interacting factor [Source:ZFIN;Acc:ZDB-GENE-030131-5938]
14. tnnc1b ENSDARG00000037539 13945 2.307 - 0.708 - - - 0.823 0.776 - - troponin C type 1b (slow) [Source:ZFIN;Acc:ZDB-GENE-040625-62]
15. SNRPG ENSDARG00000099667 18697 2.294 - 0.833 - - - 0.711 - 0.750 - small nuclear ribonucleoprotein polypeptide G [Source:ZFIN;Acc:ZDB-GENE-040912-105]
16. sucla2 ENSDARG00000005359 5992 2.266 - 0.782 0.713 - - 0.771 - - - succinate-CoA ligase, ADP-forming, beta subunit [Source:ZFIN;Acc:ZDB-GENE-040426-1963]
17. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 2.261 - - 0.702 - - 0.705 0.854 - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
18. tomm34 ENSDARG00000001557 1874 2.231 - 0.721 - - - 0.763 0.747 - - translocase of outer mitochondrial membrane 34 [Source:ZFIN;Acc:ZDB-GENE-030131-2081]
19. ccdc47 ENSDARG00000054362 5970 2.18 - 0.738 0.725 - - - 0.717 - - coiled-coil domain containing 47 [Source:ZFIN;Acc:ZDB-GENE-040912-15]
20. vwde ENSDARG00000103443 5758 2.175 - - - - - 0.701 0.733 - 0.741 von Willebrand factor D and EGF domains [Source:ZFIN;Acc:ZDB-GENE-060929-1226]
21. ccdc22 ENSDARG00000052379 2276 1.906 - - - 0.988 - - - - 0.918 coiled-coil domain containing 22 [Source:ZFIN;Acc:ZDB-GENE-050913-93]
22. bnip4 ENSDARG00000022832, ENSDARG00000117207 3100 1.897 - - - 0.986 - - - 0.911 - BCL2 interacting protein 4 [Source:ZFIN;Acc:ZDB-GENE-051113-212]
23. arhgdig ENSDARG00000004034 10368 1.877 - - - 0.980 - - - 0.897 - Rho GDP dissociation inhibitor (GDI) gamma [Source:ZFIN;Acc:ZDB-GENE-040426-1493]
24. rpl13a ENSDARG00000044093, ENSDARG00000116541 10473 1.87 - - - 0.980 - - 0.890 - - ribosomal protein L13a [Source:ZFIN;Acc:ZDB-GENE-030131-168]
25. si:ch73-110p20.1 5932 1.851 - - - 0.982 - - - 0.869 - si:ch73-110p20.1
26. zgc:85777 ENSDARG00000027009, ENSDARG00000112673 1499 1.833 - - - - - - - 0.915 0.918 zgc:85777 [Source:ZFIN;Acc:ZDB-GENE-040426-2210]
27. COL22A1 COL22A1 4473 1.833 - - - 0.992 - - 0.841 - -
28. commd4 ENSDARG00000061946 3281 1.829 - - - - - - - 0.924 0.905 COMM domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060929-600]
29. piezo1 ENSDARG00000076870 4704 1.8 - - - 0.986 - - - 0.814 - piezo-type mechanosensitive ion channel component 1 [Source:ZFIN;Acc:ZDB-GENE-041111-255]
30. EEF1E1 ENSDARG00000071774 3806 1.798 - - - - - - 0.897 - 0.901 eukaryotic translation elongation factor 1 epsilon 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4949]
31. fermt2 ENSDARG00000020242 9351 1.796 - - - - - - 0.915 - 0.881 fermitin family member 2 [Source:ZFIN;Acc:ZDB-GENE-050506-132]
32. hadhb ENSDARG00000102055 9700 1.79 - - - 0.985 - - 0.805 - - hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta [Source:ZFIN;Acc:ZDB-GENE-030131-8550]
33. capza1b ENSDARG00000056090, ENSDARG00000109842, ENSDARG00000110402 12199 1.788 - 0.869 - - - - 0.919 - - capping actin protein of muscle Z-line subunit alpha 1b [Source:ZFIN;Acc:ZDB-GENE-031002-24]
34. TMPO TMPO 3264 1.782 - - - - - - 0.847 - 0.935
35. frmd6 ENSDARG00000002332 2698 1.781 - - - - - - - 0.918 0.863 FERM domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-050522-354]
36. eif4ebp3l ENSDARG00000041607 5257 1.78 - 0.848 - - - - - - 0.932 eukaryotic translation initiation factor 4E binding protein 3, like [Source:ZFIN;Acc:ZDB-GENE-030826-26]
37. slc20a2 ENSDARG00000060796, ENSDARG00000113613 5420 1.78 - - - - - - 0.886 - 0.894 solute carrier family 20 (phosphate transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-060929-828]
38. hmgb2b ENSDARG00000053990 11519 1.771 - 0.855 - 0.916 - - - - - high mobility group box 2b [Source:ZFIN;Acc:ZDB-GENE-040912-122]
39. tpd52l2b ENSDARG00000013655 9460 1.766 - - - - - - - 0.875 0.891 tumor protein D52-like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-822]
40. limch1a ENSDARG00000074275 2981 1.761 - - - - - - 0.849 0.912 - LIM and calponin homology domains 1a [Source:ZFIN;Acc:ZDB-GENE-090312-153]
41. eif3ha ENSDARG00000102452 9238 1.747 - - - 0.980 - - 0.767 - - eukaryotic translation initiation factor 3, subunit H, a [Source:ZFIN;Acc:ZDB-GENE-040808-19]
42. srm ENSDARG00000055760 6572 1.746 - 0.757 - 0.989 - - - - - spermidine synthase [Source:ZFIN;Acc:ZDB-GENE-040426-1183]
43. angptl4 ENSDARG00000035859 2701 1.744 - - - 0.987 - - 0.757 - - angiopoietin-like 4 [Source:ZFIN;Acc:ZDB-GENE-041111-222]
44. eprs ENSDARG00000060494 4729 1.739 - - - - - - 0.813 - 0.926 glutamyl-prolyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-638]
45. taf10 ENSDARG00000068641 3333 1.739 - - - 0.977 - - 0.762 - - TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-060526-334]
46. ppdpfa ENSDARG00000007682 3214 1.738 - 0.821 - - - - - 0.917 - pancreatic progenitor cell differentiation and proliferation factor a [Source:ZFIN;Acc:ZDB-GENE-030219-204]
47. cap2 ENSDARG00000104478 3266 1.717 - - - - - 0.836 0.881 - - CAP, adenylate cyclase-associated protein, 2 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1758]
48. dcbld2 ENSDARG00000062177, ENSDARG00000112201 3795 1.714 - 0.784 - - - - - 0.930 - discoidin, CUB and LCCL domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1822]
49. wwtr1 ENSDARG00000067719 3484 1.712 - 0.790 - - - - - - 0.922 WW domain containing transcription regulator 1 [Source:ZFIN;Acc:ZDB-GENE-051101-1]
50. lepre1 lepre1 5346 1.712 - 0.854 - - - - - - 0.858
51. AKAP2 AKAP2 4178 1.711 - - - - - - 0.788 0.923 -
52. chrnb1 ENSDARG00000069660, ENSDARG00000112115, ENSDARG00000113395 1438 1.705 - - - - - 0.823 0.882 - - cholinergic receptor, nicotinic, beta 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-070821-4]
53. snd1 ENSDARG00000006766 12906 1.703 - - - - - - - 0.803 0.900 staphylococcal nuclease and tudor domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3124]
54. capzb ENSDARG00000100252 10444 1.702 - - - - - 0.824 0.878 - - capping actin protein of muscle Z-line subunit beta [Source:ZFIN;Acc:ZDB-GENE-030131-7023]
55. actc1a ENSDARG00000042535, ENSDARG00000076126, ENSDARG00000116925 6499 1.702 - - - - - - 0.781 - 0.921 actin, alpha, cardiac muscle 1a [Source:ZFIN;Acc:ZDB-GENE-040520-4]
56. zgc:77262 ENSDARG00000044545 5563 1.7 - 0.716 - 0.984 - - - - - zgc:77262 [Source:ZFIN;Acc:ZDB-GENE-040426-1811]
57. thoc7 ENSDARG00000015394 3824 1.699 - 0.717 - 0.982 - - - - - THO complex 7 [Source:ZFIN;Acc:ZDB-GENE-040801-17]
58. palm1a ENSDARG00000026882, ENSDARG00000115356 3425 1.693 - - - - - - 0.754 - 0.939 paralemmin 1a [Source:ZFIN;Acc:ZDB-GENE-050417-409]
59. jph2 ENSDARG00000028625 6706 1.691 - - - - - 0.842 0.849 - - junctophilin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9848]
60. usp4 ENSDARG00000014770 1684 1.69 - - - 0.986 - - 0.704 - - ubiquitin specific peptidase 4 (proto-oncogene) [Source:ZFIN;Acc:ZDB-GENE-041008-187]
61. hsp90aa1.1 ENSDARG00000010478 47784 1.689 - - - - - 0.835 0.854 - - heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-990415-94]
62. syf2 ENSDARG00000004706 2463 1.687 - - - 0.985 - - 0.702 - - SYF2 pre-mRNA-splicing factor [Source:ZFIN;Acc:ZDB-GENE-040801-170]
63. fam13a ENSDARG00000075564 1905 1.686 - - - - - - 0.779 0.907 - family with sequence similarity 13, member A [Source:ZFIN;Acc:ZDB-GENE-050208-102]
64. cnbpb ENSDARG00000070922 14606 1.682 - - - - - 0.784 0.898 - - CCHC-type zinc finger, nucleic acid binding protein b [Source:ZFIN;Acc:ZDB-GENE-030131-7782]
65. sdcbp2 ENSDARG00000012513, ENSDARG00000113289, ENSDARG00000115159 6359 1.682 - - - 0.973 - - 0.709 - - syndecan binding protein (syntenin) 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3727]
66. cox17 ENSDARG00000069920, ENSDARG00000114117 5591 1.681 - - - - - 0.838 0.843 - - cytochrome c oxidase copper chaperone COX17 [Source:ZFIN;Acc:ZDB-GENE-040912-91]
67. mrpl15 ENSDARG00000101306 2796 1.681 - - - - - - 0.754 - 0.927 mitochondrial ribosomal protein L15 [Source:ZFIN;Acc:ZDB-GENE-040801-168]
68. atp5h 18018 1.68 - 0.766 - - - - - 0.914 - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit d, transcript variant X1
69. asphd2 ENSDARG00000059629 1005 1.677 - - - - - - 0.755 - 0.922 aspartate beta-hydroxylase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-061103-142]
70. mccc1 ENSDARG00000102538, ENSDARG00000115996 2069 1.676 - - - - - - 0.759 0.917 - methylcrotonoyl-CoA carboxylase 1 (alpha) [Source:ZFIN;Acc:ZDB-GENE-050208-450]
71. xirp2a ENSDARG00000071113 7113 1.676 - - - - - 0.824 0.852 - - xin actin binding repeat containing 2a [Source:ZFIN;Acc:ZDB-GENE-040108-7]
72. trim55a ENSDARG00000029596 2858 1.675 - - - - - 0.867 0.808 - - tripartite motif containing 55a [Source:ZFIN;Acc:ZDB-GENE-040718-50]
73. ywhag2 ENSDARG00000071658, ENSDARG00000116741 3326 1.673 - - - - - - 0.712 - 0.961 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-061023-2]
74. rp42-pen rp42-pen 3395 1.671 - - - - - 0.808 0.863 - -
75. nid1a ENSDARG00000068710 3948 1.671 - - - - - 0.795 0.876 - - nidogen 1a [Source:ZFIN;Acc:ZDB-GENE-050302-58]
76. gmpr ENSDARG00000016160 1537 1.671 - - - - - 0.809 0.862 - - guanosine monophosphate reductase [Source:ZFIN;Acc:ZDB-GENE-050522-48]
77. rai14 ENSDARG00000039974, ENSDARG00000111103 916 1.671 - - - - - - 0.772 0.899 - retinoic acid induced 14 [Source:ZFIN;Acc:ZDB-GENE-040718-235]
78. ndufb11 ENSDARG00000043467 7495 1.669 - - - - - 0.809 0.860 - - NADH:ubiquinone oxidoreductase subunit B11 [Source:ZFIN;Acc:ZDB-GENE-050309-25]
79. ndufs1 ENSDARG00000028546 5795 1.667 - - - - - 0.854 0.813 - - NADH:ubiquinone oxidoreductase core subunit S1 [Source:ZFIN;Acc:ZDB-GENE-030131-478]
80. crabp2a_1 ENSDARG00000073978 888 1.662 - - - - - - 0.774 - 0.888 cellular retinoic acid binding protein 2, a [Source:ZFIN;Acc:ZDB-GENE-020320-4]
81. cox6b2 ENSDARG00000037860 33134 1.66 - - - - - 0.844 0.816 - - cytochrome c oxidase subunit 6B2 [Source:ZFIN;Acc:ZDB-GENE-040426-1566]
82. atp5o 10343 1.655 - - - - - 0.791 0.864 - - ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit
83. klhl41b ENSDARG00000006757 10762 1.654 - - - - - 0.832 0.822 - - kelch-like family member 41b [Source:ZFIN;Acc:ZDB-GENE-030131-9875]
84. myom1a ENSDARG00000061249 10230 1.653 - - - - - 0.805 0.848 - - myomesin 1a (skelemin) [Source:ZFIN;Acc:ZDB-GENE-030131-2856]
85. hint1 ENSDARG00000103824, ENSDARG00000110789 8302 1.652 - - - - - 0.722 - 0.930 - histidine triad nucleotide binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040927-8]
86. C22H19orf70 C22H19orf70 4393 1.65 - - - - - 0.808 0.842 - -
87. MRPS12_1 MRPS12_1 2714 1.65 - - - - - 0.732 - 0.918 -
88. ndufab1a ENSDARG00000058463, ENSDARG00000112762 11317 1.648 - - - - - 0.770 0.878 - - NADH:ubiquinone oxidoreductase subunit AB1a [Source:ZFIN;Acc:ZDB-GENE-040801-1]
89. zgc:92518 ENSDARG00000016343 3837 1.645 - - - - - 0.804 0.841 - - zgc:92518 [Source:ZFIN;Acc:ZDB-GENE-040718-53]
90. zgc:193541 ENSDARG00000092873 21276 1.645 - - - - - 0.765 0.880 - - zgc:193541 [Source:ZFIN;Acc:ZDB-GENE-081022-15]
91. PTGES3L PTGES3L 4801 1.645 - - - - - 0.779 0.866 - -
92. ppp2r2d ENSDARG00000102009 5710 1.643 - 0.803 - - - - - - 0.840 protein phosphatase 2, regulatory subunit B, delta [Source:ZFIN;Acc:ZDB-GENE-040426-2086]
93. tnnt2d ENSDARG00000002988 7590 1.64 - - - - - 0.888 0.752 - - troponin T2d, cardiac [Source:ZFIN;Acc:ZDB-GENE-050626-97]
94. PTPLA PTPLA 4044 1.64 - - - - - 0.798 0.842 - -
95. mef2cb ENSDARG00000009418 1124 1.639 - - - - - - 0.715 - 0.924 myocyte enhancer factor 2cb [Source:ZFIN;Acc:ZDB-GENE-040901-7]
96. cox7c ENSDARG00000104537 12169 1.638 - - - - - 0.725 0.913 - - cytochrome c oxidase subunit 7C [Source:ZFIN;Acc:ZDB-GENE-030131-8062]
97. sspn ENSDARG00000041747, ENSDARG00000114109, ENSDARG00000114643 1228 1.636 - - - - - 0.779 0.857 - - sarcospan (Kras oncogene-associated gene) [Source:ZFIN;Acc:ZDB-GENE-051127-43]
98. rpl37 ENSDARG00000034291, ENSDARG00000076360 13668 1.634 - - - 0.817 - - 0.817 - - ribosomal protein L37 [Source:ZFIN;Acc:ZDB-GENE-040625-39]
99. capns1a ENSDARG00000035329 10870 1.633 - - - - - - - 0.851 0.782 calpain, small subunit 1 a [Source:ZFIN;Acc:ZDB-GENE-030113-3]
100. ATP5J_2 ATP5J_2 2381 1.633 - - - - - 0.801 0.832 - -

There are 1368 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA