Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for pdap1a

Gene Name Gene ID Reads Annotation
pdap1a ENSDARG00000092546, ENSDARG00000116115 7617 pdgfa associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1693]










Genes with expression patterns similar to pdap1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pdap1a ENSDARG00000092546, ENSDARG00000116115 7617 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 pdgfa associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1693]
2. akirin2 ENSDARG00000058729 13245 3.344 - 0.965 0.775 - - - 0.860 0.744 - akirin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2944]
3. sfpq ENSDARG00000011564, ENSDARG00000115611 15626 3.34 - 0.935 0.764 - - - 0.768 - 0.873 splicing factor proline/glutamine-rich [Source:ZFIN;Acc:ZDB-GENE-040426-2452]
4. sltm ENSDARG00000052728 6234 3.189 0.725 0.941 - - - 0.770 0.753 - - SAFB-like, transcription modulator [Source:ZFIN;Acc:ZDB-GENE-040426-2647]
5. lbr ENSDARG00000014013 4835 3.174 0.748 - 0.868 - - - 0.745 - 0.813 lamin B receptor [Source:ZFIN;Acc:ZDB-GENE-030804-11]
6. znf346 ENSDARG00000060695 3942 3.161 - - - - 0.934 - 0.761 0.755 0.711 zinc finger protein 346 [Source:ZFIN;Acc:ZDB-GENE-070209-152]
7. MAP4K4 ENSDARG00000098670 4665 2.787 - 0.949 - - 0.981 - - - 0.857 mitogen-activated protein kinase kinase kinase kinase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6722]
8. smc1al ENSDARG00000058203 8838 2.651 - - - 0.993 - - 0.804 - 0.854 structural maintenance of chromosomes 1A, like [Source:ZFIN;Acc:ZDB-GENE-040426-57]
9. tuba1c ENSDARG00000055216 8384 2.64 - - 0.856 0.992 - - - - 0.792 tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
10. tox ENSDARG00000032317 9126 2.631 - - 0.852 0.990 - - - - 0.789 thymocyte selection-associated high mobility group box [Source:ZFIN;Acc:ZDB-GENE-070912-181]
11. sf1 ENSDARG00000008188 5142 2.628 - - - - 0.941 - 0.867 - 0.820 splicing factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2492]
12. tmpoa ENSDARG00000007315 3638 2.536 - - - - 0.988 - 0.745 0.803 - thymopoietin a [Source:ZFIN;Acc:ZDB-GENE-030131-6003]
13. mad2l1 ENSDARG00000004713 3398 2.528 - - 0.820 - 0.961 - - - 0.747 MAD2 mitotic arrest deficient-like 1 (yeast) [Source:ZFIN;Acc:ZDB-GENE-030515-3]
14. pdia5 ENSDARG00000069242 3576 2.525 - 0.950 0.813 - - - 0.762 - - protein disulfide isomerase family A, member 5 [Source:ZFIN;Acc:ZDB-GENE-030521-5]
15. bag6 ENSDARG00000075892 3782 2.519 0.759 0.958 - - - - 0.802 - - BCL2 associated athanogene 6 [Source:ZFIN;Acc:ZDB-GENE-010501-5]
16. tnrc6b ENSDARG00000074161 4597 2.507 - - - - 0.949 - 0.806 - 0.752 trinucleotide repeat containing 6b [Source:ZFIN;Acc:ZDB-GENE-030131-13]
17. rbm4.3 ENSDARG00000022129 28571 2.494 - - - 0.920 0.827 - - 0.747 - RNA binding motif protein 4.3 [Source:ZFIN;Acc:ZDB-GENE-040426-1938]
18. AGO1 ENSDARG00000092644 4521 2.491 - - - 0.991 - - - 0.739 0.761 argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]
19. cdk5 ENSDARG00000056683 1998 2.488 - - - - 0.958 - 0.807 - 0.723 cyclin-dependent kinase 5 [Source:ZFIN;Acc:ZDB-GENE-010131-2]
20. uck2a ENSDARG00000006074 1554 2.463 - 0.954 - - - - - 0.782 0.727 uridine-cytidine kinase 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7158]
21. gfer ENSDARG00000070061 1119 2.456 - 0.945 0.794 - - - 0.717 - - growth factor, augmenter of liver regeneration (ERV1 homolog, S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060810-186]
22. cdk2ap2 ENSDARG00000103145 8024 2.447 - 0.812 - - - - 0.790 - 0.845 cyclin-dependent kinase 2 associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-040718-35]
23. rab11a ENSDARG00000041450, ENSDARG00000109465 7418 2.434 - 0.956 0.763 - - - - - 0.715 RAB11a, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-041114-53]
24. whsc1l1 8544 2.42 - - - - - - 0.791 0.815 0.814 Wolf-Hirschhorn syndrome candidate 1-like 1, transcript variant X2
25. trrap ENSDARG00000100623 3429 2.409 - - - - - - 0.872 0.826 0.711 transformation/transcription domain-associated protein [Source:ZFIN;Acc:ZDB-GENE-050809-47]
26. max ENSDARG00000024844 6035 2.403 - - 0.834 - - - 0.750 - 0.819 myc associated factor X [Source:ZFIN;Acc:ZDB-GENE-990415-152]
27. stag2b ENSDARG00000053668, ENSDARG00000109728 7193 2.387 - - - - 0.961 - 0.703 - 0.723 stromal antigen 2b [Source:ZFIN;Acc:ZDB-GENE-030131-2785]
28. eif4bb ENSDARG00000010194, ENSDARG00000112432 12555 2.381 - - - - 0.944 - 0.725 - 0.712 eukaryotic translation initiation factor 4Bb [Source:ZFIN;Acc:ZDB-GENE-030131-8563]
29. HNRNPAB HNRNPAB 22267 2.367 - - 0.743 - - - 0.814 - 0.810
30. LPHN2 LPHN2 1971 2.366 - - 0.823 - - - 0.778 - 0.765
31. rbb4 rbb4 15541 2.348 - - - - - - 0.790 0.761 0.797
32. Sep-06 Sep-06 5465 2.334 0.749 - - - - - 0.808 - 0.777
33. rnf2 ENSDARG00000010381 3427 2.313 - - 0.812 - - - - 0.800 0.701 ring finger protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5243]
34. sf3a1 ENSDARG00000041887 6702 2.313 - - - - - - 0.739 0.839 0.735 splicing factor 3a, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030616-156]
35. rbm14a ENSDARG00000012723, ENSDARG00000114603 3802 2.312 - - - - - - 0.743 0.797 0.772 RNA binding motif protein 14a [Source:ZFIN;Acc:ZDB-GENE-050522-496]
36. nop10 ENSDARG00000104227 2463 2.293 0.720 - 0.839 - - - 0.734 - - NOP10 ribonucleoprotein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-041007-4]
37. snrpd3l ENSDARG00000076283 7655 2.275 0.718 - - - - - 0.728 - 0.829 small nuclear ribonucleoprotein D3 polypeptide, like [Source:ZFIN;Acc:ZDB-GENE-030131-5219]
38. ahctf1 ENSDARG00000077530 2315 2.258 - - - - - - 0.768 0.764 0.726 AT hook containing transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-070521-2]
39. tma7 ENSDARG00000071670 13372 2.221 - - - - - - 0.733 0.716 0.772 translation machinery associated 7 homolog [Source:ZFIN;Acc:ZDB-GENE-061027-176]
40. psmb3 ENSDARG00000013938 10744 2.19 0.749 - 0.703 - - - - - 0.738 proteasome subunit beta 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2682]
41. cul4b ENSDARG00000060510 6053 1.944 - 0.951 - 0.993 - - - - - cullin 4B [Source:ZFIN;Acc:ZDB-GENE-041008-208]
42. atoh8 ENSDARG00000037555, ENSDARG00000110248 2059 1.943 - 0.949 - 0.994 - - - - - atonal bHLH transcription factor 8 [Source:ZFIN;Acc:ZDB-GENE-061215-7]
43. prrc1 ENSDARG00000044304 1567 1.909 - 0.954 - - 0.955 - - - - proline-rich coiled-coil 1 [Source:ZFIN;Acc:ZDB-GENE-041024-9]
44. SERBP1 SERBP1 9276 1.888 - - - 0.996 0.892 - - - -
45. ube2c ENSDARG00000101618, ENSDARG00000114670 5271 1.859 - - - - 0.953 - 0.906 - - ubiquitin-conjugating enzyme E2C [Source:ZFIN;Acc:ZDB-GENE-051030-48]
46. AMBRA1_1 AMBRA1_1 2179 1.84 - - - 0.994 - - 0.846 - -
47. rerea ENSDARG00000077353 4162 1.834 - - - 0.989 - - 0.845 - - arginine-glutamic acid dipeptide (RE) repeats a [Source:ZFIN;Acc:ZDB-GENE-060718-1]
48. jarid2b ENSDARG00000062268 2206 1.825 - - - - 0.983 - - - 0.842 jumonji, AT rich interactive domain 2b [Source:ZFIN;Acc:ZDB-GENE-060503-246]
49. kdm6bb ENSDARG00000056929 4807 1.811 - - - - 0.975 - - - 0.836 lysine (K)-specific demethylase 6B, b [Source:ZFIN;Acc:ZDB-GENE-040724-166]
50. rbm25 rbm25 3629 1.81 - - - - 0.953 - - - 0.857
51. znf280d ENSDARG00000077013 1387 1.804 - - - - 0.964 - - 0.840 - zinc finger protein 280D [Source:ZFIN;Acc:ZDB-GENE-030131-2260]
52. slmo2 slmo2 5559 1.794 - - - 0.994 - - 0.800 - -
53. chd4b ENSDARG00000025789 14299 1.794 - - - 0.894 0.900 - - - - chromodomain helicase DNA binding protein 4b [Source:ZFIN;Acc:ZDB-GENE-030131-4532]
54. gap43 ENSDARG00000099744 4114 1.791 - - - 0.993 - - - - 0.798 growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
55. top2a ENSDARG00000024488 4273 1.786 - - - - 0.932 - - - 0.854 DNA topoisomerase II alpha [Source:ZFIN;Acc:ZDB-GENE-030131-2453]
56. CT955967.1 ENSDARG00000099956 2885 1.783 - - - - 0.981 - - 0.802 -
57. rtn3_1 ENSDARG00000091348 3290 1.779 - 0.963 - - - - 0.816 - - reticulon 3 [Source:ZFIN;Acc:ZDB-GENE-030710-5]
58. wu:fk48d07 wu:fk48d07 13245 1.776 - 0.915 - - - - - - 0.861
59. GATAD2B ENSDARG00000005834 3855 1.775 - 0.948 - - - - - - 0.827 GATA zinc finger domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-060503-655]
60. prpf40a ENSDARG00000058467 6565 1.774 - - - 0.995 - - - - 0.779 PRP40 pre-mRNA processing factor 40 homolog A [Source:ZFIN;Acc:ZDB-GENE-030131-274]
61. smc3 ENSDARG00000019000, ENSDARG00000112055 6553 1.773 - 0.937 - - - - - 0.836 - structural maintenance of chromosomes 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3196]
62. ywhae1 ENSDARG00000006399, ENSDARG00000109636, ENSDARG00000109789 13364 1.764 0.776 - - 0.988 - - - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-779]
63. nr2f6a ENSDARG00000003607 4779 1.763 - 0.949 - - 0.814 - - - - nuclear receptor subfamily 2, group F, member 6a [Source:ZFIN;Acc:ZDB-GENE-030131-4362]
64. pycr1 pycr1 1258 1.759 - - 0.765 0.994 - - - - -
65. CABZ01057907.1 CABZ01057907.1 1140 1.757 - 0.949 - - - - 0.808 - -
66. gpm6ab ENSDARG00000004621 5825 1.748 - - - - 0.944 - - - 0.804 glycoprotein M6Ab [Source:ZFIN;Acc:ZDB-GENE-030710-8]
67. wu:fc26g07 wu:fc26g07 1165 1.746 - - 0.786 - 0.960 - - - -
68. arcn1b ENSDARG00000031214 4529 1.746 - - - - 0.955 0.791 - - - archain 1b [Source:ZFIN;Acc:ZDB-GENE-040121-7]
69. tceb1b 14935 1.745 - - - 0.892 0.853 - - - - transcription elongation factor B (SIII), polypeptide 1b
70. mcm2 ENSDARG00000102798 8148 1.744 - - - 0.893 - - - - 0.851 minichromosome maintenance complex component 2 [Source:ZFIN;Acc:ZDB-GENE-020419-24]
71. snrpd2 ENSDARG00000040440, ENSDARG00000110285 4301 1.732 - 0.948 - - - - 0.784 - - small nuclear ribonucleoprotein D2 polypeptide [Source:ZFIN;Acc:ZDB-GENE-040914-10]
72. epha4b ENSDARG00000011600 3110 1.73 - - - - 0.980 - - - 0.750 eph receptor A4b [Source:ZFIN;Acc:ZDB-GENE-030826-6]
73. stx6 ENSDARG00000042742, ENSDARG00000115635 1208 1.727 - - - - 0.963 - - - 0.764 syntaxin 6 [Source:ZFIN;Acc:ZDB-GENE-030131-858]
74. rpl7l1 ENSDARG00000042864 3256 1.726 - 0.956 - - - - - 0.770 - ribosomal protein L7-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-970]
75. wls ENSDARG00000009534 8719 1.726 - 0.898 - - 0.828 - - - - wntless Wnt ligand secretion mediator [Source:ZFIN;Acc:ZDB-GENE-040426-2161]
76. si:dkey-42i9.4 ENSDARG00000008049 4752 1.725 - - - - 0.979 - 0.746 - - si:dkey-42i9.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8398]
77. blcap ENSDARG00000052073 8646 1.725 - - - 0.993 - - 0.732 - - bladder cancer associated protein [Source:ZFIN;Acc:ZDB-GENE-000330-7]
78. pcif1 ENSDARG00000099084 2851 1.723 - - - - 0.961 - - - 0.762 PDX1 C-terminal inhibiting factor 1 [Source:ZFIN;Acc:ZDB-GENE-120920-2]
79. zc3h15 ENSDARG00000015889 3861 1.723 0.769 0.954 - - - - - - - zinc finger CCCH-type containing 15 [Source:ZFIN;Acc:ZDB-GENE-030131-6239]
80. ubr2 ENSDARG00000070164 3960 1.721 - - 0.785 - 0.936 - - - - ubiquitin protein ligase E3 component n-recognin 2 [Source:ZFIN;Acc:ZDB-GENE-081107-29]
81. anapc16 ENSDARG00000013822 5857 1.721 - 0.950 - - - - 0.771 - - anaphase promoting complex subunit 16 [Source:ZFIN;Acc:ZDB-GENE-050417-430]
82. ptpn13 ENSDARG00000103699 2866 1.719 - 0.947 0.772 - - - - - - protein tyrosine phosphatase, non-receptor type 13 [Source:ZFIN;Acc:ZDB-GENE-070410-72]
83. otub1a ENSDARG00000055536 2892 1.718 - 0.952 - - - - 0.766 - - OTU deubiquitinase, ubiquitin aldehyde binding 1a [Source:ZFIN;Acc:ZDB-GENE-040718-108]
84. rnaseh1 ENSDARG00000042571 922 1.717 - - - - 0.958 - 0.759 - - ribonuclease H1 [Source:ZFIN;Acc:ZDB-GENE-040718-407]
85. cnot1 ENSDARG00000004174, ENSDARG00000109411 4625 1.716 - - - 0.996 - - - - 0.720 CCR4-NOT transcription complex, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040915-1]
86. nsd1a ENSDARG00000060016 2974 1.715 - - - - - - 0.853 0.862 - nuclear receptor binding SET domain protein 1a [Source:ZFIN;Acc:ZDB-GENE-080519-3]
87. sox4a ENSDARG00000004588, ENSDARG00000096389 2213 1.711 - - - - 0.959 - - 0.752 - SRY (sex determining region Y)-box 4a [Source:ZFIN;Acc:ZDB-GENE-030131-8290]
88. dpysl5a ENSDARG00000011141 1827 1.71 - - - - - - - 0.908 0.802 dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
89. si:ch211-197h24.6 ENSDARG00000091631 1933 1.709 - - - - 0.958 - - - 0.751 si:ch211-197h24.6 [Source:ZFIN;Acc:ZDB-GENE-030131-1361]
90. cpsf3 ENSDARG00000027649 6897 1.709 - - 0.928 - - - 0.781 - - cleavage and polyadenylation specific factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3275]
91. eif4e1c ENSDARG00000012274, ENSDARG00000116158 4768 1.708 - 0.948 - - - - - - 0.760 eukaryotic translation initiation factor 4E family member 1c [Source:ZFIN;Acc:ZDB-GENE-050417-398]
92. arf4a ENSDARG00000045989, ENSDARG00000103858 2545 1.708 - 0.938 0.770 - - - - - - ADP-ribosylation factor 4a [Source:ZFIN;Acc:ZDB-GENE-040801-109]
93. elf2b ENSDARG00000079626, ENSDARG00000117064 3057 1.707 - - - - 0.979 - 0.728 - - E74-like factor 2b (ets domain transcription factor) [Source:ZFIN;Acc:ZDB-GENE-031215-1]
94. taf9 ENSDARG00000077870 6992 1.707 - 0.970 - - - - 0.737 - - TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-204]
95. pl10 pl10 10795 1.705 - - 0.876 - - - 0.829 - -
96. EIF1B ENSDARG00000029445 5034 1.701 0.709 - - 0.992 - - - - - eukaryotic translation initiation factor 1B [Source:HGNC Symbol;Acc:HGNC:30792]
97. kpna2 ENSDARG00000038066 7954 1.701 - 0.960 - - - - - - 0.741 karyopherin alpha 2 (RAG cohort 1, importin alpha 1) [Source:ZFIN;Acc:ZDB-GENE-040718-22]
98. arl6ip1 ENSDARG00000054578, ENSDARG00000112340 11714 1.701 0.733 0.968 - - - - - - - ADP-ribosylation factor-like 6 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1087]
99. exosc3 ENSDARG00000098334, ENSDARG00000104246 1287 1.701 - - - - 0.989 - 0.712 - - exosome component 3 [Source:ZFIN;Acc:ZDB-GENE-050706-140]
100. cuedc1b ENSDARG00000054748 1638 1.7 - - - - 0.954 - 0.746 - - CUE domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-070424-29]

There are 1950 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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