Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for pcna

Gene Name Gene ID Reads Annotation
pcna ENSDARG00000054155 89521 proliferating cell nuclear antigen [Source:ZFIN;Acc:ZDB-GENE-000210-8]










Genes with expression patterns similar to pcna

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pcna ENSDARG00000054155 89521 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 proliferating cell nuclear antigen [Source:ZFIN;Acc:ZDB-GENE-000210-8]
2. wu:fc51f04 wu:fc51f04 7074 2.298 0.814 - - 0.767 - - - - 0.717
3. ddx5 ENSDARG00000038068 35302 2.24 - - - 0.722 0.736 0.782 - - - DEAD (Asp-Glu-Ala-Asp) box helicase 5 [Source:ZFIN;Acc:ZDB-GENE-030131-925]
4. smarca5 ENSDARG00000052348 15433 2.232 0.769 - - - - 0.748 - - 0.715 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:ZFIN;Acc:ZDB-GENE-021125-1]
5. rbm4.3 ENSDARG00000022129 28571 2.21 - - 0.724 - - 0.726 - 0.760 - RNA binding motif protein 4.3 [Source:ZFIN;Acc:ZDB-GENE-040426-1938]
6. h2afva ENSDARG00000068820 16427 2.188 - - - - - 0.768 - 0.716 0.704 H2A histone family, member Va [Source:ZFIN;Acc:ZDB-GENE-020717-1]
7. anp32a ENSDARG00000006487 28249 2.171 - - 0.702 - - - - 0.759 0.710 acidic (leucine-rich) nuclear phosphoprotein 32 family, member A [Source:ZFIN;Acc:ZDB-GENE-030131-7850]
8. mta2 ENSDARG00000013031 2932 2.157 - - - 0.708 - - - 0.733 0.716 metastasis associated 1 family, member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4803]
9. G3BP2 ENSDARG00000014790 9380 1.74 - - - - - 0.747 0.993 - - GTPase activating protein (SH3 domain) binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1972]
10. ing4 ENSDARG00000030716 5908 1.713 - - - - - 0.735 0.978 - - inhibitor of growth family, member 4 [Source:ZFIN;Acc:ZDB-GENE-050522-47]
11. dlb ENSDARG00000004232 5120 1.712 - - - 0.720 - - 0.992 - - deltaB [Source:ZFIN;Acc:ZDB-GENE-980526-114]
12. nr2f5 ENSDARG00000033172 11808 1.701 - - - - - 0.719 0.982 - - nuclear receptor subfamily 2, group F, member 5 [Source:ZFIN;Acc:ZDB-GENE-990415-253]
13. alyref ENSDARG00000077732 25934 1.698 - - - - - 0.706 0.992 - - Aly/REF export factor [Source:ZFIN;Acc:ZDB-GENE-070928-29]
14. znf827 ENSDARG00000076171 6304 1.622 - - - - - 0.702 0.920 - - zinc finger protein 827 [Source:ZFIN;Acc:ZDB-GENE-080728-3]
15. h3f3a 66671 1.62 - - - - 0.798 - - 0.822 - H3 histone, family 3A, transcript variant X1
16. TUBA1A ENSDARG00000001889 25294 1.61 - - - 0.773 0.837 - - - - tubulin, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090507-4]
17. hmga1a ENSDARG00000028335 254077 1.606 - - 0.808 0.798 - - - - - high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
18. cirbp cirbp 88363 1.584 0.813 - 0.771 - - - - - -
19. MKI67 ENSDARG00000091150 11038 1.577 - - - - - 0.865 - - 0.712 marker of proliferation Ki-67 [Source:ZFIN;Acc:ZDB-GENE-030131-9771]
20. ptmab ENSDARG00000101766 182812 1.565 - - 0.750 - - - - 0.815 - prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
21. setb ENSDARG00000003920 21788 1.554 - - - - 0.704 0.850 - - - SET nuclear proto-oncogene b [Source:ZFIN;Acc:ZDB-GENE-030131-433]
22. h2afvb ENSDARG00000116491 35692 1.541 - - - - - 0.751 - 0.790 - H2A histone family, member Vb [Source:ZFIN;Acc:ZDB-GENE-050506-24]
23. rrm2_1 ENSDARG00000020711, ENSDARG00000078069 11634 1.539 - - - - 0.798 - - - 0.741 ribonucleotide reductase M2 polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-25]
24. dpy30 ENSDARG00000004427 7112 1.533 0.755 - - - - - 0.778 - - dpy-30 histone methyltransferase complex regulatory subunit [Source:ZFIN;Acc:ZDB-GENE-040718-136]
25. LIG1 ENSDARG00000060041, ENSDARG00000110159, ENSDARG00000113788 8110 1.52 - - - 0.804 - 0.716 - - - ligase I, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-110404-2]
26. kpnb3 ENSDARG00000040245 7967 1.508 - - - 0.724 - 0.784 - - - karyopherin (importin) beta 3 [Source:ZFIN;Acc:ZDB-GENE-030424-2]
27. kpnb1 ENSDARG00000104889 9282 1.503 - - - 0.702 0.801 - - - - karyopherin (importin) beta 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2579]
28. cfl1 ENSDARG00000021124 78399 1.499 0.785 - - - - - - 0.714 - cofilin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-215]
29. wu:fq41a10 wu:fq41a10 7009 1.498 0.771 - - 0.727 - - - - -
30. rbb4 rbb4 15541 1.487 - - - - - 0.755 - - 0.732
31. hnrpl 6412 1.487 0.730 - - - - 0.757 - - - heterogeneous nuclear ribonucleoprotein L, transcript variant X1
32. ssbp4 ENSDARG00000056483 10196 1.48 - - - - - 0.700 - 0.780 - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
33. nova2 ENSDARG00000017673 7685 1.472 - - - 0.758 - - - - 0.714 neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
34. sfpq ENSDARG00000011564, ENSDARG00000115611 15626 1.471 0.738 - - 0.733 - - - - - splicing factor proline/glutamine-rich [Source:ZFIN;Acc:ZDB-GENE-040426-2452]
35. hsp90ab1 ENSDARG00000029150 102372 1.47 - - 0.713 - - - - 0.757 - heat shock protein 90, alpha (cytosolic), class B member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-95]
36. hnrnpa0l ENSDARG00000036161, ENSDARG00000076380, ENSDARG00000114889 72444 1.464 - - - - 0.735 - - - 0.729 heterogeneous nuclear ribonucleoprotein A0, like [Source:ZFIN;Acc:ZDB-GENE-030131-618]
37. mcm5 ENSDARG00000019507 6407 1.464 - - - 0.758 - 0.706 - - - minichromosome maintenance complex component 5 [Source:ZFIN;Acc:ZDB-GENE-021209-1]
38. hnrnpm ENSDARG00000061735 19428 1.46 - - - 0.705 - - - - 0.755 heterogeneous nuclear ribonucleoprotein M [Source:ZFIN;Acc:ZDB-GENE-030131-6898]
39. hnrnpa0b ENSDARG00000036162, ENSDARG00000112653 27740 1.447 0.717 - - - - - - - 0.730 heterogeneous nuclear ribonucleoprotein A0b [Source:ZFIN;Acc:ZDB-GENE-030131-6154]
40. rbm8a ENSDARG00000016516 8789 1.439 0.734 - - - - 0.705 - - - RNA binding motif protein 8A [Source:ZFIN;Acc:ZDB-GENE-050306-51]
41. rrm1 ENSDARG00000014017 7296 1.434 - - - 0.710 - - - - 0.724 ribonucleotide reductase M1 polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-247]
42. mab21l1 ENSDARG00000102047 4665 1.419 - - - 0.718 - - - 0.701 - mab-21-like 1 [Source:ZFIN;Acc:ZDB-GENE-020516-1]
43. bzw1a ENSDARG00000010481 28451 0.996 - - - - - - 0.996 - - basic leucine zipper and W2 domains 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3951]
44. eif4g2b ENSDARG00000057167 22982 0.993 - - - - - - 0.993 - - eukaryotic translation initiation factor 4, gamma 2b [Source:ZFIN;Acc:ZDB-GENE-030131-6550]
45. PCBP4 ENSDARG00000024276 3194 0.993 - - - - - - 0.993 - - poly(rC) binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2122]
46. ptprsa ENSDARG00000059738, ENSDARG00000110940 7232 0.993 - - - - - - 0.993 - - protein tyrosine phosphatase, receptor type, s, a [Source:ZFIN;Acc:ZDB-GENE-020107-3]
47. MAF1 ENSDARG00000013122 6899 0.993 - - - - - - 0.993 - - MAF1 homolog, negative regulator of RNA polymerase III [Source:ZFIN;Acc:ZDB-GENE-040426-2788]
48. caprin1a ENSDARG00000009346, ENSDARG00000112212 9675 0.993 - - - - - - 0.993 - - cell cycle associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-226]
49. arf6a ENSDARG00000101626 2959 0.993 - - - - - - 0.993 - - ADP-ribosylation factor 6a [Source:ZFIN;Acc:ZDB-GENE-030131-8007]
50. kpna2 ENSDARG00000038066 7954 0.992 - - - - - - 0.992 - - karyopherin alpha 2 (RAG cohort 1, importin alpha 1) [Source:ZFIN;Acc:ZDB-GENE-040718-22]
51. pou3f1 ENSDARG00000009823, ENSDARG00000112302 7037 0.992 - - - - - - 0.992 - - POU class 3 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-372]
52. nkd1 ENSDARG00000020053 4450 0.992 - - - - - - 0.992 - - naked cuticle homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-061108-3]
53. her6 ENSDARG00000006514, ENSDARG00000111099 7477 0.992 - - - - - - 0.992 - - hairy-related 6 [Source:ZFIN;Acc:ZDB-GENE-980526-144]
54. ACVR2B 6615 0.992 - - - - - - 0.992 - - activin A receptor, type IIB
55. tomm70a ENSDARG00000029639, ENSDARG00000112054 7715 0.991 - - - - - - 0.991 - - translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-8173]
56. BOLA2B BOLA2B 2957 0.991 - - - - - - 0.991 - -
57. cebpg ENSDARG00000036073 3791 0.991 - - - - - - 0.991 - - CCAAT enhancer binding protein gamma [Source:ZFIN;Acc:ZDB-GENE-020111-5]
58. gid8b ENSDARG00000037589 2121 0.991 - - - - - - 0.991 - - GID complex subunit 8 homolog b (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030515-4]
59. aplp1 ENSDARG00000098368 2317 0.991 - - - - - - 0.991 - - amyloid beta (A4) precursor-like protein 1 [Source:ZFIN;Acc:ZDB-GENE-040319-1]
60. atp1a3a ENSDARG00000018259 5393 0.991 - - - - - - 0.991 - - ATPase Na+/K+ transporting subunit alpha 3a [Source:ZFIN;Acc:ZDB-GENE-001212-7]
61. slc31a1 ENSDARG00000013961, ENSDARG00000110656 4072 0.991 - - - - - - 0.991 - - solute carrier family 31 (copper transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-040415-3]
62. tmed2 ENSDARG00000026908 9070 0.991 - - - - - - 0.991 - - transmembrane p24 trafficking protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-269]
63. dap3 ENSDARG00000078500 2724 0.99 - - - - - - 0.990 - - death associated protein 3 [Source:ZFIN;Acc:ZDB-GENE-051129-2]
64. CABZ01034848.1 CABZ01034848.1 9936 0.99 - - - - - - 0.990 - -
65. C18H12orf23 C18H12orf23 5362 0.99 - - - - - - 0.990 - -
66. smcr7a smcr7a 1356 0.99 - - - - - - 0.990 - -
67. map2k4b ENSDARG00000077177 1869 0.99 - - - - - - 0.990 - - mitogen-activated protein kinase kinase 4b [Source:ZFIN;Acc:ZDB-GENE-080721-13]
68. TMEM255A ENSDARG00000073911 924 0.99 - - - - - - 0.990 - - transmembrane protein 255A [Source:ZFIN;Acc:ZDB-GENE-070412-2]
69. rbm14b ENSDARG00000103834 1597 0.99 - - - - - - 0.990 - - RNA binding motif protein 14b [Source:ZFIN;Acc:ZDB-GENE-040426-2455]
70. ucmab ENSDARG00000005485 1808 0.99 - - - - - - 0.990 - - upper zone of growth plate and cartilage matrix associated b [Source:ZFIN;Acc:ZDB-GENE-040426-2368]
71. rbmx2 ENSDARG00000044380, ENSDARG00000115698 2528 0.99 - - - - - - 0.990 - - RNA binding motif protein X-linked 2 [Source:ZFIN;Acc:ZDB-GENE-050626-88]
72. anxa11a ENSDARG00000077383 4076 0.99 - - - - - - 0.990 - - annexin A11a [Source:ZFIN;Acc:ZDB-GENE-030707-4]
73. LURAP1 ENSDARG00000044406, ENSDARG00000115301 938 0.99 - - - - - - 0.990 - - leucine rich adaptor protein 1 [Source:ZFIN;Acc:ZDB-GENE-070928-35]
74. HECW1 HECW1 1531 0.99 - - - - - - 0.990 - -
75. LRIG3 ENSDARG00000079363 909 0.99 - - - - - - 0.990 - - leucine-rich repeats and immunoglobulin-like domains 3 [Source:ZFIN;Acc:ZDB-GENE-130530-866]
76. spred2a ENSDARG00000052435 1624 0.99 - - - - - - 0.990 - - sprouty-related, EVH1 domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-110830-2]
77. mapk14b ENSDARG00000028721 1486 0.99 - - - - - - 0.990 - - mitogen-activated protein kinase 14b [Source:ZFIN;Acc:ZDB-GENE-021007-1]
78. znf740 znf740 2458 0.99 - - - - - - 0.990 - -
79. wu:fj05h12 wu:fj05h12 6166 0.99 - - - - - - 0.990 - -
80. btbd3a ENSDARG00000005544 595 0.99 - - - - - - 0.990 - - BTB (POZ) domain containing 3a [Source:ZFIN;Acc:ZDB-GENE-090312-7]
81. olig4 ENSDARG00000052610, ENSDARG00000116678 1704 0.99 - - - - - - 0.990 - - oligodendrocyte transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-030131-3580]
82. kiaa0907 1674 0.99 - - - - - - 0.990 - - KIAA0907 protein, transcript variant X7
83. slc38a4 ENSDARG00000018149 2344 0.99 - - - - - - 0.990 - - solute carrier family 38, member 4 [Source:ZFIN;Acc:ZDB-GENE-041010-14]
84. tp53 ENSDARG00000035559, ENSDARG00000115148 4362 0.99 - - - - - - 0.990 - - tumor protein p53 [Source:ZFIN;Acc:ZDB-GENE-990415-270]
85. dhps ENSDARG00000003270 827 0.99 - - - - - - 0.990 - - deoxyhypusine synthase [Source:ZFIN;Acc:ZDB-GENE-040426-2001]
86. shroom1 ENSDARG00000094181 2325 0.99 - - - - - - 0.990 - - shroom family member 1 [Source:ZFIN;Acc:ZDB-GENE-091204-385]
87. dtna ENSDARG00000031015 1746 0.99 - - - - - - 0.990 - - dystrobrevin, alpha [Source:ZFIN;Acc:ZDB-GENE-070117-2]
88. gcdh gcdh 1390 0.99 - - - - - - 0.990 - -
89. prrc2c ENSDARG00000057583, ENSDARG00000116399 1673 0.99 - - - - - - 0.990 - - proline-rich coiled-coil 2C [Source:ZFIN;Acc:ZDB-GENE-081104-156]
90. zc3hc1 ENSDARG00000062651 1552 0.99 - - - - - - 0.990 - - zinc finger, C3HC-type containing 1 [Source:ZFIN;Acc:ZDB-GENE-061013-94]
91. dcaf17 ENSDARG00000074909 913 0.99 - - - - - - 0.990 - - ddb1 and cul4 associated factor 17 [Source:ZFIN;Acc:ZDB-GENE-071008-1]
92. med1 ENSDARG00000075340 2421 0.99 - - - - - - 0.990 - - mediator complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-081104-257]
93. pdha1a ENSDARG00000012387, ENSDARG00000116841 8358 0.989 - - - - - - 0.989 - - pyruvate dehydrogenase E1 alpha 1 subunit a [Source:ZFIN;Acc:ZDB-GENE-040426-2719]
94. zgc:158387 zgc:158387 9147 0.989 - - - - - - 0.989 - -
95. c8g ENSDARG00000032098 1368 0.988 - - - - - - 0.988 - - complement component 8, gamma polypeptide [Source:ZFIN;Acc:ZDB-GENE-040426-1898]
96. ndufs3 ENSDARG00000015385 7790 0.988 - - - - - - 0.988 - - NADH:ubiquinone oxidoreductase core subunit S3 [Source:ZFIN;Acc:ZDB-GENE-050417-274]
97. atp5mf ENSDARG00000037867 11052 0.987 - - - - - - 0.987 - - ATP synthase membrane subunit f [Source:ZFIN;Acc:ZDB-GENE-050309-87]
98. eif4a1b ENSDARG00000003032, ENSDARG00000116907 14301 0.984 - - - - - - 0.984 - - eukaryotic translation initiation factor 4A1B [Source:ZFIN;Acc:ZDB-GENE-040120-6]
99. prtgb ENSDARG00000040442 12365 0.983 - - - - - - 0.983 - - protogenin homolog b (Gallus gallus) [Source:ZFIN;Acc:ZDB-GENE-060302-1]
100. hif1ab ENSDARG00000034293 10284 0.98 - - - - - - 0.980 - - hypoxia inducible factor 1 subunit alpha b [Source:ZFIN;Acc:ZDB-GENE-040426-706]

There are 298 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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