Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for pcif1

Gene Name Gene ID Reads Annotation
pcif1 ENSDARG00000099084 2851 PDX1 C-terminal inhibiting factor 1 [Source:ZFIN;Acc:ZDB-GENE-120920-2]










Genes with expression patterns similar to pcif1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pcif1 ENSDARG00000099084 2851 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 PDX1 C-terminal inhibiting factor 1 [Source:ZFIN;Acc:ZDB-GENE-120920-2]
2. IM:7163548 IM:7163548 6540 3.147 - - - 0.704 0.942 0.759 - 0.742 -
3. CDCA4 ENSDARG00000042319 7918 2.783 - - - - 0.983 0.880 - 0.920 - cell division cycle associated 4 [Source:ZFIN;Acc:ZDB-GENE-030131-1695]
4. top2a ENSDARG00000024488 4273 2.737 - - - - 0.965 - - 0.967 0.805 DNA topoisomerase II alpha [Source:ZFIN;Acc:ZDB-GENE-030131-2453]
5. atrx ENSDARG00000042236, ENSDARG00000112921, ENSDARG00000116878 7922 2.587 - - - 0.705 0.959 - - 0.923 - alpha thalassemia/mental retardation syndrome X-linked homolog (human) [Source:ZFIN;Acc:ZDB-GENE-030912-11]
6. AP3B2 1874 2.574 - - - - - 0.849 - 0.976 0.749 adaptor related protein complex 3 beta 2 subunit, transcript variant X2
7. sf1 ENSDARG00000008188 5142 2.559 - - - - 0.967 0.872 - - 0.720 splicing factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2492]
8. nae1 ENSDARG00000011301, ENSDARG00000111542 1505 2.55 - - - - - 0.850 - 0.968 0.732 nedd8 activating enzyme E1 subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1552]
9. DVL3 1098 2.474 - - - - - 0.785 - 0.958 0.731 dishevelled segment polarity protein 3
10. lfng ENSDARG00000037879 11783 2.432 - - - - - 0.715 0.997 - 0.720 LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-980605-16]
11. thoc7 ENSDARG00000015394 3824 2.42 0.723 - - - 0.990 0.707 - - - THO complex 7 [Source:ZFIN;Acc:ZDB-GENE-040801-17]
12. setbp1 ENSDARG00000093799 4499 2.387 - - - - - 0.794 - 0.871 0.722 SET binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060526-72]
13. stox2a ENSDARG00000070162 1620 2.289 - 0.710 - - - 0.822 - - 0.757 storkhead box 2a [Source:ZFIN;Acc:ZDB-GENE-090313-101]
14. mcm5 ENSDARG00000019507 6407 2.289 - - - 0.754 0.823 - - - 0.712 minichromosome maintenance complex component 5 [Source:ZFIN;Acc:ZDB-GENE-021209-1]
15. tmem47 ENSDARG00000057322 4691 2.273 - - - - 0.702 0.760 - 0.811 - transmembrane protein 47 [Source:ZFIN;Acc:ZDB-GENE-040426-2644]
16. nrarpb ENSDARG00000018958 6225 2.263 - - - 0.711 - 0.797 - - 0.755 NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
17. Sep-03 Sep-03 1124 2.236 - - - 0.702 - 0.745 - 0.789 -
18. hnrnpa0b ENSDARG00000036162, ENSDARG00000112653 27740 2.234 - - - - - 0.729 - 0.770 0.735 heterogeneous nuclear ribonucleoprotein A0b [Source:ZFIN;Acc:ZDB-GENE-030131-6154]
19. NDUFB2 ENSDARG00000045490 9141 1.951 - - - - 0.951 - 1.000 - - NADH:ubiquinone oxidoreductase subunit B2 [Source:ZFIN;Acc:ZDB-GENE-040426-1762]
20. pinx1 ENSDARG00000023532 4452 1.949 - - - - - - 1.000 0.949 - PIN2 (TERF1) interacting telomerase inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-030515-2]
21. sh3bp5a ENSDARG00000100529 642 1.949 - - - - 0.987 - - 0.962 - SH3-domain binding protein 5a (BTK-associated) [Source:ZFIN;Acc:ZDB-GENE-111111-2]
22. arf6b ENSDARG00000052928 4585 1.921 - - - - 0.979 - - 0.942 - ADP-ribosylation factor 6b [Source:ZFIN;Acc:ZDB-GENE-030131-9056]
23. atp6v1d ENSDARG00000011175 8331 1.877 - - - - 0.911 - - 0.966 - ATPase H+ transporting V1 subunit D [Source:ZFIN;Acc:ZDB-GENE-040426-727]
24. atp1b4 ENSDARG00000053262 1337 1.87 - - - - 0.989 0.881 - - - ATPase Na+/K+ transporting subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-070412-1]
25. rcan1a ENSDARG00000003109, ENSDARG00000112478 3319 1.858 - - - - 0.965 - - 0.893 - regulator of calcineurin 1a [Source:ZFIN;Acc:ZDB-GENE-040801-135]
26. tnika ENSDARG00000056218 728 1.852 - - - - - 0.886 - 0.966 - TRAF2 and NCK interacting kinase a [Source:ZFIN;Acc:ZDB-GENE-030131-3767]
27. stx6 ENSDARG00000042742, ENSDARG00000115635 1208 1.851 - - - - 0.991 0.860 - - - syntaxin 6 [Source:ZFIN;Acc:ZDB-GENE-030131-858]
28. ube2c ENSDARG00000101618, ENSDARG00000114670 5271 1.84 - - - - 0.976 - - 0.864 - ubiquitin-conjugating enzyme E2C [Source:ZFIN;Acc:ZDB-GENE-051030-48]
29. celsr2 ENSDARG00000019726, ENSDARG00000094388 4002 1.84 - - - - - 0.878 - 0.962 - cadherin, EGF LAG seven-pass G-type receptor 2 [Source:ZFIN;Acc:ZDB-GENE-070122-2]
30. eif3c ENSDARG00000016443 18003 1.833 - - - - 0.905 - - 0.928 - eukaryotic translation initiation factor 3, subunit C [Source:ZFIN;Acc:ZDB-GENE-030131-6166]
31. BX957337.1 BX957337.1 1685 1.828 - - - - - 0.869 - 0.959 -
32. CABZ01013938.1 CABZ01013938.1 4497 1.82 - - - - 0.951 - - 0.869 -
33. lmo3 ENSDARG00000008720, ENSDARG00000114518 4773 1.817 - - - - - 0.864 - 0.953 - LIM domain only 3 [Source:ZFIN;Acc:ZDB-GENE-050522-201]
34. gipc1 ENSDARG00000104483 2913 1.811 - - - - - 0.848 - 0.963 - GIPC PDZ domain containing family, member 1 [Source:ZFIN;Acc:ZDB-GENE-060726-1]
35. plk4 ENSDARG00000004576 688 1.8 - - - - - 0.835 - 0.965 - polo-like kinase 4 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030619-14]
36. ctbp1 ENSDARG00000057007, ENSDARG00000115804 5795 1.799 - - - - 0.963 0.836 - - - C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]
37. si:ch211-197h24.6 ENSDARG00000091631 1933 1.796 - - - - 0.987 0.809 - - - si:ch211-197h24.6 [Source:ZFIN;Acc:ZDB-GENE-030131-1361]
38. dmtf1 ENSDARG00000025824, ENSDARG00000109819, ENSDARG00000110011 364 1.788 - - - - - 0.826 - 0.962 - cyclin D binding myb-like transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-040718-413]
39. MANEAL ENSDARG00000056450 262 1.787 - - - - - 0.823 - 0.964 - mannosidase endo-alpha like [Source:HGNC Symbol;Acc:HGNC:26452]
40. si:ch211-194k22.8 ENSDARG00000096711 1318 1.786 - - - - - 0.809 - 0.977 - si:ch211-194k22.8 [Source:ZFIN;Acc:ZDB-GENE-030131-1820]
41. snrnp27 ENSDARG00000035625 9080 1.785 - - - - 0.956 - - 0.829 - small nuclear ribonucleoprotein 27 (U4/U6.U5) [Source:ZFIN;Acc:ZDB-GENE-040718-457]
42. stmn1b ENSDARG00000033655 9491 1.781 - - - - 0.927 0.854 - - - stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
43. gltscr1l gltscr1l 782 1.778 - - - - - 0.814 - 0.964 -
44. bsk146 ENSDARG00000099069 274 1.773 - - - - - 0.802 - 0.971 - brain specific kinase 146 [Source:ZFIN;Acc:ZDB-GENE-060313-3]
45. pik3cb ENSDARG00000075253 2075 1.767 - - - - 0.985 - - 0.782 - phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit beta [Source:ZFIN;Acc:ZDB-GENE-030131-1904]
46. cadm3 ENSDARG00000057013 1545 1.764 - - - - - 0.818 - 0.946 - cell adhesion molecule 3 [Source:ZFIN;Acc:ZDB-GENE-060512-196]
47. LMLN ENSDARG00000061265 1618 1.763 - - - - - 0.763 1.000 - - leishmanolysin-like (metallopeptidase M8 family) [Source:ZFIN;Acc:ZDB-GENE-081104-298]
48. sf3b3_1 ENSDARG00000103553 1191 1.761 - - - - 0.990 0.771 - - - splicing factor 3b, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2901]
49. xkr6 xkr6 286 1.761 - - - - - 0.800 - 0.961 -
50. cuedc1b ENSDARG00000054748 1638 1.76 - - - - 0.985 0.775 - - - CUE domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-070424-29]
51. her4.2_1 ENSDARG00000056729, ENSDARG00000094426 2383 1.754 - - - - - 0.864 - 0.890 - hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
52. MAP4K4 ENSDARG00000098670 4665 1.752 - - - - 0.947 - - - 0.805 mitogen-activated protein kinase kinase kinase kinase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6722]
53. adcyap1b ENSDARG00000027740 1539 1.752 - - - - 0.989 0.763 - - - adenylate cyclase activating polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-041010-89]
54. napg napg 645 1.751 - - - - - 0.784 - 0.967 -
55. arhgap11a ENSDARG00000100019 1642 1.748 - - - - 0.990 0.758 - - - Rho GTPase activating protein 11A [Source:ZFIN;Acc:ZDB-GENE-040426-2562]
56. phc2b_1 ENSDARG00000013224 1316 1.748 - - - - - 0.784 - 0.964 - polyhomeotic homolog 2b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-1113]
57. MON2 ENSDARG00000099798 2359 1.747 - - - - - 0.840 - 0.907 - MON2 homolog, regulator of endosome-to-Golgi trafficking [Source:ZFIN;Acc:ZDB-GENE-030131-2712]
58. rbm25 rbm25 3629 1.746 - - - - 0.979 - - - 0.767
59. hnrnpa0l_1 ENSDARG00000036161, ENSDARG00000076380, ENSDARG00000114889 553 1.744 - - - - - 0.779 - 0.965 - heterogeneous nuclear ribonucleoprotein A0, like [Source:ZFIN;Acc:ZDB-GENE-030131-618]
60. SB:CB827 SB:CB827 245 1.741 - - - - - 0.779 - 0.962 -
61. ryk ENSDARG00000007231 1611 1.738 - - - - - 0.769 - 0.969 - receptor-like tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-070209-277]
62. XKR7 ENSDARG00000026333 175 1.735 - - - - - 0.773 - 0.962 - XK, Kell blood group complex subunit-related family, member 7 [Source:ZFIN;Acc:ZDB-GENE-051113-336]
63. tchp ENSDARG00000035605 1695 1.735 - - - - - 0.770 - 0.965 - trichoplein, keratin filament binding [Source:ZFIN;Acc:ZDB-GENE-060421-3368]
64. slc6a1b ENSDARG00000039647 1301 1.733 - - - - - 0.855 - 0.878 - solute carrier family 6 (neurotransmitter transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-041114-57]
65. plagl2 ENSDARG00000076657 2057 1.73 - - - - - 0.730 1.000 - - pleiomorphic adenoma gene-like 2 [Source:ZFIN;Acc:ZDB-GENE-020806-1]
66. rbpja ENSDARG00000003398 1309 1.726 - - - - 0.991 0.735 - - - recombination signal binding protein for immunoglobulin kappa J region a [Source:ZFIN;Acc:ZDB-GENE-031117-1]
67. kdm6bb ENSDARG00000056929 4807 1.724 - - - - 0.988 - - - 0.736 lysine (K)-specific demethylase 6B, b [Source:ZFIN;Acc:ZDB-GENE-040724-166]
68. pdap1a ENSDARG00000092546, ENSDARG00000116115 7617 1.723 - - - - 0.961 - - - 0.762 pdgfa associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1693]
69. Sep-06 Sep-06 5465 1.719 - - - - - - - 0.959 0.760
70. gpm6ab ENSDARG00000004621 5825 1.718 - - - - 0.972 - - - 0.746 glycoprotein M6Ab [Source:ZFIN;Acc:ZDB-GENE-030710-8]
71. rnd3a ENSDARG00000076799 4705 1.718 - - - - - 0.718 1.000 - - Rho family GTPase 3a [Source:ZFIN;Acc:ZDB-GENE-010319-40]
72. CR387996.1 ENSDARG00000097774 3037 1.715 - - - - - 0.780 - 0.935 -
73. ncl ENSDARG00000002710 16951 1.715 - - - - - - 0.997 - 0.718 nucleolin [Source:ZFIN;Acc:ZDB-GENE-030131-6986]
74. rab43 ENSDARG00000059404 1118 1.715 - - - - - 0.747 - 0.968 - RAB43, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-060825-25]
75. b4galt7 ENSDARG00000021899 546 1.71 - - - - - 0.765 - 0.945 - xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I) [Source:ZFIN;Acc:ZDB-GENE-040727-3]
76. minos1 ENSDARG00000101619 5273 1.705 - - - - 0.960 - - 0.745 - mitochondrial inner membrane organizing system 1 [Source:ZFIN;Acc:ZDB-GENE-060825-325]
77. fam199x ENSDARG00000009982 967 1.705 0.749 - - - - - - 0.956 - family with sequence similarity 199, X-linked [Source:ZFIN;Acc:ZDB-GENE-040808-24]
78. vamp2 ENSDARG00000056877 2158 1.703 - - - - - - - 0.961 0.742 vesicle-associated membrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8225]
79. RANBP3 RANBP3 2513 1.697 - - - 0.713 0.984 - - - -
80. znf280d ENSDARG00000077013 1387 1.696 - - - - 0.990 - - - 0.706 zinc finger protein 280D [Source:ZFIN;Acc:ZDB-GENE-030131-2260]
81. hmgb3a ENSDARG00000056725 15668 1.69 - - - - - 0.776 - 0.914 - high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
82. lrrc4.2 ENSDARG00000003020 235 1.69 - - - - - 0.727 - 0.963 - leucine rich repeat containing 4.2 [Source:ZFIN;Acc:ZDB-GENE-030131-7997]
83. lpl ENSDARG00000087697 2578 1.686 - - - - - 0.734 - 0.952 - lipoprotein lipase [Source:ZFIN;Acc:ZDB-GENE-990415-139]
84. TDG TDG 1191 1.685 - - - - - 0.731 - 0.954 -
85. myef2 ENSDARG00000059398 6050 1.683 - - - - - - - 0.869 0.814 myelin expression factor 2 [Source:ZFIN;Acc:ZDB-GENE-051120-114]
86. dok7 ENSDARG00000060236 364 1.68 - - - - - 0.723 - 0.957 - docking protein 7 [Source:ZFIN;Acc:ZDB-GENE-090312-103]
87. slc1a2b ENSDARG00000102453 3136 1.679 - - - - - 0.731 - 0.948 - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
88. LDLRAD4 LDLRAD4 1237 1.678 - - - - - 0.715 - 0.963 -
89. nadl1.1 1200 1.676 - - - - - - - 0.960 0.716 neural adhesion molecule L1.1, transcript variant X1
90. znf346 ENSDARG00000060695 3942 1.674 - - - - 0.965 - - - 0.709 zinc finger protein 346 [Source:ZFIN;Acc:ZDB-GENE-070209-152]
91. GATAD2B ENSDARG00000005834 3855 1.669 - - - - - - - 0.943 0.726 GATA zinc finger domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-060503-655]
92. ivns1abpb ENSDARG00000013946 1972 1.668 - - - 0.736 - - - 0.932 - influenza virus NS1A binding protein b [Source:ZFIN;Acc:ZDB-GENE-030131-6266]
93. impdh1b ENSDARG00000029524 7472 1.667 - - - - - 0.767 - 0.900 - IMP (inosine 5'-monophosphate) dehydrogenase 1b [Source:ZFIN;Acc:ZDB-GENE-030219-206]
94. stag2b ENSDARG00000053668, ENSDARG00000109728 7193 1.667 - - - 0.730 0.937 - - - - stromal antigen 2b [Source:ZFIN;Acc:ZDB-GENE-030131-2785]
95. c1d ENSDARG00000021112 2839 1.666 - - - - - - - 0.944 0.722 C1D nuclear receptor corepressor [Source:ZFIN;Acc:ZDB-GENE-041024-8]
96. jarid2b ENSDARG00000062268 2206 1.664 - - - - 0.958 0.706 - - - jumonji, AT rich interactive domain 2b [Source:ZFIN;Acc:ZDB-GENE-060503-246]
97. mcm6 ENSDARG00000057683, ENSDARG00000113317 6591 1.65 - - - - - 0.921 - - 0.729 minichromosome maintenance complex component 6 [Source:ZFIN;Acc:ZDB-GENE-030909-6]
98. thrap3b ENSDARG00000098228 4396 1.648 - - - - - - - 0.915 0.733 thyroid hormone receptor associated protein 3b [Source:ZFIN;Acc:ZDB-GENE-040516-9]
99. pgam5 ENSDARG00000035608 4044 1.648 - - - - - 0.715 - 0.933 - PGAM family member 5, serine/threonine protein phosphatase, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-683]
100. tet2 ENSDARG00000076928 2190 1.645 - - - - - 0.790 - 0.855 - tet methylcytosine dioxygenase 2 [Source:ZFIN;Acc:ZDB-GENE-090312-98]

There are 1958 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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