Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for pcdh1gc5

Gene Name Gene ID Reads Annotation
pcdh1gc5 ENSDARG00000104826 10052 protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]










Genes with expression patterns similar to pcdh1gc5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pcdh1gc5 ENSDARG00000104826 10052 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
2. stmn1b ENSDARG00000033655 9491 4.305 0.895 - 0.744 - - 0.946 0.967 0.753 - stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
3. nrarpb ENSDARG00000018958 6225 4.278 0.783 0.736 - - - 0.952 0.988 0.819 - NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
4. hmgb1b ENSDARG00000030479 10398 4.11 0.732 - 0.804 - - 0.899 0.940 0.735 - high mobility group box 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8480]
5. dpysl2b ENSDARG00000032083, ENSDARG00000109782 3487 4.082 0.704 0.743 0.743 - - 0.968 0.924 - - dihydropyrimidinase-like 2b [Source:ZFIN;Acc:ZDB-GENE-031105-1]
6. fyna ENSDARG00000011370 1679 4.06 0.808 0.801 - - - 0.797 0.910 0.744 - FYN proto-oncogene, Src family tyrosine kinase a [Source:ZFIN;Acc:ZDB-GENE-030903-5]
7. cspg5a ENSDARG00000069981 1699 4.025 0.853 0.726 - - - 0.716 0.976 0.754 - chondroitin sulfate proteoglycan 5a [Source:ZFIN;Acc:ZDB-GENE-080425-4]
8. cd99l2 ENSDARG00000056722 5036 3.985 0.734 0.845 - 0.707 - 0.919 0.780 - - CD99 molecule-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1986]
9. tle2 5014 3.885 0.771 - - 0.713 - 0.786 0.817 0.798 - transducin-like enhancer of split 2 (E(sp1) homolog, Drosophila), transcript variant X4
10. myt1b ENSDARG00000102879 5411 3.689 0.891 0.882 - - - 0.969 0.947 - - myelin transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-090313-67]
11. onecut1 ENSDARG00000007982, ENSDARG00000112251 6307 3.686 0.896 0.902 - - - 0.921 0.967 - - one cut homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1469]
12. sypa ENSDARG00000042974, ENSDARG00000110528 3217 3.672 0.984 0.744 - - - 0.985 0.959 - - synaptophysin a [Source:ZFIN;Acc:ZDB-GENE-031104-2]
13. nova2 ENSDARG00000017673 7685 3.668 0.915 0.853 - - - 0.920 0.980 - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
14. si:ch73-21g5.7 ENSDARG00000093156 9412 3.66 0.907 0.835 - - - 0.936 0.982 - - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
15. mir10d-1 mir10d-1 860 3.66 0.873 0.901 - - - 0.956 0.930 - -
16. pcsk1nl ENSDARG00000076170 1232 3.648 0.863 0.835 - - - 0.966 0.984 - - proprotein convertase subtilisin/kexin type 1 inhibitor, like [Source:ZFIN;Acc:ZDB-GENE-090427-2]
17. nadl1.1 1200 3.642 0.837 0.885 - - - 0.935 0.985 - - neural adhesion molecule L1.1, transcript variant X1
18. slc1a3a ENSDARG00000104431 9888 3.639 0.923 0.788 - - - 0.988 0.940 - - solute carrier family 1 (glial high affinity glutamate transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2159]
19. stx1b ENSDARG00000000503 2724 3.631 0.924 0.802 - - - 0.952 0.953 - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
20. BX957337.1 BX957337.1 1685 3.625 0.879 0.815 - - - 0.983 0.948 - -
21. stmn2a ENSDARG00000033234 2272 3.62 0.807 0.918 - - - 0.969 0.926 - - stathmin 2a [Source:ZFIN;Acc:ZDB-GENE-041010-85]
22. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 3.603 0.946 0.841 - - - 0.886 0.930 - - cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
23. slc18a3a ENSDARG00000006356 1285 3.602 0.821 0.880 - - - 0.913 0.988 - - solute carrier family 18 (vesicular acetylcholine transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-060929-990]
24. gap43 ENSDARG00000099744 4114 3.595 0.845 0.822 - - - 0.976 0.952 - - growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
25. mapk12b ENSDARG00000006409 2246 3.577 0.842 0.824 - - - 0.941 0.970 - - mitogen-activated protein kinase 12b [Source:ZFIN;Acc:ZDB-GENE-041210-123]
26. snap25a ENSDARG00000020609 4537 3.57 0.872 0.790 - - - 0.974 0.934 - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
27. nes ENSDARG00000088805 2710 3.567 0.861 0.868 - - - 0.851 0.987 - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
28. zic4 ENSDARG00000031307 1228 3.564 0.877 0.818 - - - 0.959 0.910 - - zic family member 4 [Source:ZFIN;Acc:ZDB-GENE-040622-4]
29. sox2 ENSDARG00000070913 2763 3.559 0.880 0.903 - - - 0.809 0.967 - - SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
30. dpysl5a ENSDARG00000011141 1827 3.551 0.857 - - - - 0.950 0.944 0.800 - dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
31. neurog1 ENSDARG00000056130 3924 3.545 0.867 0.913 - - - 0.785 0.980 - - neurogenin 1 [Source:ZFIN;Acc:ZDB-GENE-990415-174]
32. syt11a ENSDARG00000057913 1145 3.533 0.861 0.719 - - - 0.967 0.986 - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
33. mllt11 ENSDARG00000071026 2518 3.533 0.857 - - - - 0.985 0.946 0.745 - MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
34. AGO1 ENSDARG00000092644 4521 3.526 0.947 0.807 - - - 0.831 0.941 - - argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]
35. TUBB8P7_1 TUBB8P7_1 2722 3.525 0.862 0.727 - - - 0.964 0.972 - -
36. atp1b4 ENSDARG00000053262 1337 3.524 0.858 0.779 - - - 0.973 0.914 - - ATPase Na+/K+ transporting subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-070412-1]
37. tmem35 ENSDARG00000052567 5685 3.522 0.869 - - - - 0.805 0.976 0.872 - transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
38. rfx4 ENSDARG00000026395, ENSDARG00000116861 2047 3.508 0.830 0.857 - - - 0.953 0.868 - - regulatory factor X, 4 [Source:ZFIN;Acc:ZDB-GENE-040909-2]
39. MAP1A MAP1A 847 3.501 0.796 0.832 - - - 0.978 0.895 - -
40. TUBA1A ENSDARG00000001889 25294 3.498 0.792 - - 0.744 - 0.972 0.990 - - tubulin, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090507-4]
41. celsr2 ENSDARG00000019726, ENSDARG00000094388 4002 3.491 0.821 0.805 - - - 0.962 0.903 - - cadherin, EGF LAG seven-pass G-type receptor 2 [Source:ZFIN;Acc:ZDB-GENE-070122-2]
42. atp1a1b ENSDARG00000019856, ENSDARG00000115121 1953 3.49 0.880 0.815 - - - 0.925 0.870 - - ATPase Na+/K+ transporting subunit alpha 1b [Source:ZFIN;Acc:ZDB-GENE-001212-5]
43. sox19a ENSDARG00000010770, ENSDARG00000110497 4683 3.487 0.892 - 0.764 - - 0.859 0.972 - - SRY (sex determining region Y)-box 19a [Source:ZFIN;Acc:ZDB-GENE-980526-102]
44. tox ENSDARG00000032317 9126 3.487 0.827 - - - - 0.868 0.944 0.848 - thymocyte selection-associated high mobility group box [Source:ZFIN;Acc:ZDB-GENE-070912-181]
45. pax6a ENSDARG00000103379 3061 3.486 0.824 0.837 - - - 0.925 0.900 - - paired box 6a [Source:ZFIN;Acc:ZDB-GENE-990415-200]
46. slc32a1 ENSDARG00000059775 1092 3.486 0.866 0.742 - - - 0.964 0.914 - - solute carrier family 32 (GABA vesicular transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-061201-1]
47. scrt2 ENSDARG00000056175 4331 3.486 0.854 0.785 - - - 0.982 0.865 - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
48. ZFHX3 ENSDARG00000103057 7759 3.484 0.897 - 0.731 - - 0.934 0.922 - - zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]
49. slc1a2b ENSDARG00000102453 3136 3.481 0.848 0.776 - - - 0.950 0.907 - - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
50. CHL1 CHL1 1553 3.48 0.929 0.833 - - - 0.834 0.884 - -
51. tnika ENSDARG00000056218 728 3.477 0.803 0.877 - - - 0.858 0.939 - - TRAF2 and NCK interacting kinase a [Source:ZFIN;Acc:ZDB-GENE-030131-3767]
52. CLIP3 ENSDARG00000054456 734 3.476 0.820 0.858 - - - 0.838 0.960 - - CAP-GLY domain containing linker protein 3 [Source:ZFIN;Acc:ZDB-GENE-131127-193]
53. adam23a ENSDARG00000062323 580 3.475 0.801 0.780 - - - 0.930 0.964 - - ADAM metallopeptidase domain 23a [Source:ZFIN;Acc:ZDB-GENE-070810-2]
54. irx1b ENSDARG00000056594 2224 3.473 0.834 0.833 - - - 0.835 0.971 - - iroquois homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-010716-1]
55. scn8aa ENSDARG00000005775 792 3.469 0.823 0.808 - - - 0.950 0.888 - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
56. CU928222.1 ENSDARG00000097436 1662 3.464 0.780 0.905 - - - 0.805 0.974 - -
57. her4.2_1 ENSDARG00000056729, ENSDARG00000094426 2383 3.463 0.774 0.833 - - - 0.902 0.954 - - hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
58. rufy3 ENSDARG00000029692 3031 3.453 0.867 - - - - 0.759 0.867 - 0.960 RUN and FYVE domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050327-58]
59. TUSC5 TUSC5 1436 3.447 0.830 0.793 - - - 0.948 0.876 - -
60. stmn2b ENSDARG00000070537 1586 3.442 0.859 0.819 - - - 0.971 0.793 - - stathmin 2b [Source:ZFIN;Acc:ZDB-GENE-050522-207]
61. amph ENSDARG00000007663 599 3.441 0.833 0.766 - - - 0.924 0.918 - - amphiphysin [Source:ZFIN;Acc:ZDB-GENE-040426-1711]
62. ptprnb ENSDARG00000077047 2743 3.44 0.889 0.913 - - - 0.761 0.877 - - protein tyrosine phosphatase, receptor type, Nb [Source:ZFIN;Acc:ZDB-GENE-100505-1]
63. glrbb ENSDARG00000052769, ENSDARG00000113828 467 3.439 0.809 0.773 - - - 0.872 0.985 - - glycine receptor, beta b [Source:ZFIN;Acc:ZDB-GENE-040801-106]
64. msi1 ENSDARG00000010710 2634 3.437 0.856 - 0.720 - - 0.900 0.961 - - musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
65. rap2ip rap2ip 681 3.432 0.795 0.713 - - - 0.955 0.969 - -
66. ROBO3_1 ROBO3_1 468 3.432 0.725 0.807 - - - 0.969 0.931 - -
67. cadm3 ENSDARG00000057013 1545 3.427 0.710 0.851 - - - 0.984 0.882 - - cell adhesion molecule 3 [Source:ZFIN;Acc:ZDB-GENE-060512-196]
68. hpca ENSDARG00000018397, ENSDARG00000110115 3866 3.421 0.847 0.709 - - - 0.925 0.940 - - hippocalcin [Source:ZFIN;Acc:ZDB-GENE-040426-1683]
69. atp2b3b ENSDARG00000023445 1424 3.42 0.704 0.815 - - - 0.939 0.962 - - ATPase plasma membrane Ca2+ transporting 3b [Source:ZFIN;Acc:ZDB-GENE-080409-2]
70. vsnl1a ENSDARG00000023228 1584 3.41 0.786 0.802 - - - 0.968 0.854 - - visinin-like 1a [Source:ZFIN;Acc:ZDB-GENE-041001-211]
71. SV2B SV2B 208 3.369 0.763 0.766 - - - 0.951 0.889 - -
72. myt1a ENSDARG00000074030, ENSDARG00000116035 2839 3.368 - 0.809 - - - 0.914 0.930 0.715 - myelin transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3885]
73. notch1b ENSDARG00000052094 7874 3.365 0.713 - - - - 0.913 0.948 0.791 - notch 1b [Source:ZFIN;Acc:ZDB-GENE-990415-183]
74. fzd3a ENSDARG00000021664 1958 3.339 0.936 - 0.716 - - 0.792 0.895 - - frizzled class receptor 3a [Source:ZFIN;Acc:ZDB-GENE-990415-225]
75. clstn1 ENSDARG00000031720 5286 3.339 0.849 - - - - 0.749 0.953 0.788 - calsyntenin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1064]
76. nova1 ENSDARG00000020178 4129 3.328 - 0.722 - - - 0.981 0.918 0.707 - neuro-oncological ventral antigen 1 [Source:ZFIN;Acc:ZDB-GENE-060526-113]
77. CABZ01111990.1 CABZ01111990.1 4374 3.319 0.861 - 0.742 - - 0.755 0.961 - -
78. gad2 ENSDARG00000015537 724 3.309 0.828 0.809 - - - 0.822 0.850 - - glutamate decarboxylase 2 [Source:ZFIN;Acc:ZDB-GENE-030909-9]
79. dpysl4 ENSDARG00000103490 534 3.305 0.891 - 0.712 - - 0.749 0.953 - - dihydropyrimidinase-like 4 [Source:ZFIN;Acc:ZDB-GENE-050720-3]
80. sox3 ENSDARG00000053569 12016 3.303 0.902 0.864 0.804 - - - 0.733 - - SRY (sex determining region Y)-box 3 [Source:ZFIN;Acc:ZDB-GENE-980526-333]
81. dbx2 2971 3.301 0.780 0.831 - - - 0.726 0.964 - - developing brain homeobox 2
82. hes6 ENSDARG00000019335 4754 3.295 0.783 0.787 - - - 0.947 - 0.778 - hes family bHLH transcription factor 6 [Source:ZFIN;Acc:ZDB-GENE-030828-5]
83. CABZ01070258.1 ENSDARG00000105687 3643 3.293 0.858 0.735 0.746 - - - 0.954 - -
84. C8H1orf106 C8H1orf106 2690 3.284 0.900 0.727 - - - 0.724 0.933 - -
85. MCTP1 MCTP1 219 3.28 0.759 0.792 - - - 0.940 0.789 - -
86. pou3f2b ENSDARG00000076262, ENSDARG00000112713 2439 3.275 0.725 0.811 - - - 0.773 0.966 - - POU class 3 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-370]
87. ek1 ENSDARG00000020080 742 3.268 0.796 - - 0.774 - 0.818 0.880 - - eph-like kinase 1 [Source:ZFIN;Acc:ZDB-GENE-990415-58]
88. mdkb ENSDARG00000020708 5393 3.253 0.759 - - - - 0.952 0.834 0.708 - midkine b [Source:ZFIN;Acc:ZDB-GENE-010131-6]
89. scn2b ENSDARG00000101713 796 3.251 0.802 0.766 - - - 0.708 0.975 - - sodium channel, voltage-gated, type II, beta [Source:ZFIN;Acc:ZDB-GENE-070920-1]
90. sncb ENSDARG00000104945 8197 3.241 0.790 0.714 - - - 0.975 - 0.762 - synuclein, beta [Source:ZFIN;Acc:ZDB-GENE-040426-1615]
91. tmpob ENSDARG00000022978 8121 3.207 0.754 - 0.786 - - 0.814 0.853 - - thymopoietin b [Source:ZFIN;Acc:ZDB-GENE-050522-8]
92. dtnbb ENSDARG00000013020 280 3.141 0.787 0.715 - - - 0.859 0.780 - - dystrobrevin, beta b [Source:ZFIN;Acc:ZDB-GENE-070117-3]
93. zgc:113531 ENSDARG00000038794 2063 3.134 0.734 0.822 - - - 0.705 0.873 - - zgc:113531 [Source:ZFIN;Acc:ZDB-GENE-050320-52]
94. mapta ENSDARG00000089314 2038 3.131 0.825 0.730 - - - 0.824 - 0.752 - microtubule-associated protein tau a [Source:ZFIN;Acc:ZDB-GENE-081027-1]
95. lhx1b ENSDARG00000007944, ENSDARG00000111635 254 3.115 0.727 0.731 - - - 0.735 0.922 - - LIM homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-980526-116]
96. arnt2 ENSDARG00000103697 5731 3.115 - - 0.757 - - 0.805 0.826 0.727 - aryl-hydrocarbon receptor nuclear translocator 2 [Source:ZFIN;Acc:ZDB-GENE-001207-3]
97. scube2 ENSDARG00000037362 2833 3.064 0.801 - 0.732 - - 0.775 0.756 - - signal peptide, CUB domain, EGF-like 2 [Source:ZFIN;Acc:ZDB-GENE-050302-80]
98. tmem47 ENSDARG00000057322 4691 3.052 0.788 0.761 - - - 0.772 0.731 - - transmembrane protein 47 [Source:ZFIN;Acc:ZDB-GENE-040426-2644]
99. map1aa ENSDARG00000059601 599 3 0.738 0.709 - - - 0.735 0.818 - - microtubule-associated protein 1Aa [Source:ZFIN;Acc:ZDB-GENE-100426-2]
100. kdm1a ENSDARG00000060679 6152 2.974 0.709 - 0.781 - - - 0.714 0.770 - lysine (K)-specific demethylase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7828]

There are 2039 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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