Zebrafish data search
Results for pcdh1b
| Gene Name | Gene ID | Reads | Annotation |
|---|---|---|---|
| pcdh1b | ENSDARG00000036175 | 101 | protocadherin 1b [Source:ZFIN;Acc:ZDB-GENE-091015-2] |
Genes with expression patterns similar to pcdh1b
| Nr. | Gene Name | Gene ID | Reads | Σ scores | 28hpf trunk1 | 28hpf trunk2 | 28hpf whole1 | 28hpf whole2 | 28hpf whole3 PA | 40hpf trunk1 | 40hpf trunk2 | 40hpf whole embryo1 | 40hpf whole embryo2 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | pcdh1b | ENSDARG00000036175 | 101 | 8 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | - | 1.000 | 1.000 | protocadherin 1b [Source:ZFIN;Acc:ZDB-GENE-091015-2] |
| 2. | FAM98C | FAM98C | 225 | 2.372 | 0.747 | 0.751 | - | - | - | - | - | 0.874 | - | |
| 3. | zgc:193682 | zgc:193682 | 15 | 1.932 | - | - | - | 0.942 | - | 0.990 | - | - | - | |
| 4. | gng8 | ENSDARG00000042970 | 117 | 1.871 | - | 0.972 | - | - | - | - | - | 0.899 | - | guanine nucleotide binding protein (G protein), gamma 8 [Source:ZFIN;Acc:ZDB-GENE-050522-312] |
| 5. | dolpp1 | ENSDARG00000036915 | 114 | 1.83 | - | 0.919 | - | - | - | 0.911 | - | - | - | dolichyldiphosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-041024-11] |
| 6. | b3gnt3.4 | ENSDARG00000058100 | 117 | 1.819 | - | 0.948 | - | - | - | 0.871 | - | - | - | UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3, tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-030131-8875] |
| 7. | rxrab | ENSDARG00000035127 | 231 | 1.805 | - | 0.926 | - | - | - | 0.879 | - | - | - | retinoid x receptor, alpha b [Source:ZFIN;Acc:ZDB-GENE-990415-243] |
| 8. | cdc45 | ENSDARG00000043720 | 353 | 1.805 | - | 0.857 | - | - | - | 0.948 | - | - | - | CDC45 cell division cycle 45 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-2710] |
| 9. | trim25l | ENSDARG00000020863 | 292 | 1.793 | - | 0.900 | - | - | - | 0.893 | - | - | - | tripartite motif containing 25, like [Source:ZFIN;Acc:ZDB-GENE-040914-87] |
| 10. | si:dkey-153n9.5 | si:dkey-153n9.5 | 20 | 1.79 | - | - | - | - | - | 0.990 | - | - | 0.800 | |
| 11. | acaa1 | ENSDARG00000004687 | 557 | 1.788 | - | 0.973 | - | - | - | - | - | 0.815 | - | acetyl-CoA acyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040704-48] |
| 12. | casp6l1 | ENSDARG00000025608, ENSDARG00000117004 | 107 | 1.786 | - | 0.927 | - | - | - | 0.859 | - | - | - | caspase 6, apoptosis-related cysteine peptidase, like 1 [Source:ZFIN;Acc:ZDB-GENE-041010-48] |
| 13. | pibf1 | ENSDARG00000013006, ENSDARG00000015506 | 151 | 1.784 | - | - | - | - | - | 0.979 | - | 0.805 | - | progesterone immunomodulatory binding factor 1 [Source:ZFIN;Acc:ZDB-GENE-040801-94] |
| 14. | slc6a13l | 121 | 1.78 | - | 0.976 | - | - | - | 0.804 | - | - | - | solute carrier family 6 (neurotransmitter transporter, GABA), member 13 like, transcript variant X2 | |
| 15. | TMEM208 | ENSDARG00000068291 | 643 | 1.776 | - | 0.872 | - | - | - | - | - | 0.904 | - | transmembrane protein 208 [Source:HGNC Symbol;Acc:HGNC:25015] |
| 16. | sfmbt2 | ENSDARG00000045519 | 251 | 1.775 | - | 0.949 | - | - | - | - | - | 0.826 | - | Scm like with four mbt domains 2 [Source:ZFIN;Acc:ZDB-GENE-041210-196] |
| 17. | si:dkeyp-7b3.1 | si:dkeyp-7b3.1 | 615 | 1.763 | - | 0.935 | - | - | - | - | - | 0.828 | - | |
| 18. | arl5a | ENSDARG00000018627, ENSDARG00000117003 | 588 | 1.758 | - | 0.919 | - | - | - | 0.839 | - | - | - | ADP-ribosylation factor-like 5A [Source:ZFIN;Acc:ZDB-GENE-040718-28] |
| 19. | fdx1l | 461 | 1.729 | - | 0.815 | - | - | - | - | - | 0.914 | - | ferredoxin 1-like | |
| 20. | CABZ01063556.1 | ENSDARG00000116344 | 319 | 1.728 | - | - | - | - | - | 0.801 | - | 0.927 | - | L antigen family member 3 [Source:NCBI gene;Acc:100536597] |
| 21. | ncaldb | ENSDARG00000011334 | 123 | 1.726 | - | - | - | - | - | 0.875 | - | 0.851 | - | neurocalcin delta b [Source:ZFIN;Acc:ZDB-GENE-040808-37] |
| 22. | si:ch73-103l1.2 | ENSDARG00000096505 | 17 | 1.724 | 0.734 | - | - | - | - | 0.990 | - | - | - | si:ch73-103l1.2 [Source:ZFIN;Acc:ZDB-GENE-121214-226] |
| 23. | zgc:92326 | zgc:92326 | 94 | 1.694 | - | 0.972 | - | - | - | 0.722 | - | - | - | |
| 24. | ft1 | ENSDARG00000059056 | 102 | 1.687 | 0.734 | - | - | - | - | - | - | 0.953 | - | alpha(1,3)fucosyltransferase gene 1 [Source:ZFIN;Acc:ZDB-GENE-990715-17] |
| 25. | entpd2a.2 | ENSDARG00000033953 | 389 | 1.683 | - | 0.972 | - | - | - | 0.711 | - | - | - | ectonucleoside triphosphate diphosphohydrolase 2a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040724-67] |
| 26. | cry1b | cry1b | 152 | 1.681 | - | 0.961 | - | - | - | 0.720 | - | - | - | |
| 27. | si:ch211-127i16.2 | ENSDARG00000092976, ENSDARG00000116049 | 152 | 1.671 | - | 0.832 | - | - | - | 0.839 | - | - | - | si:ch211-127i16.2 [Source:ZFIN;Acc:ZDB-GENE-091204-54] |
| 28. | cyth3 | cyth3 | 120 | 1.669 | 0.786 | - | - | - | - | - | - | 0.883 | - | |
| 29. | si:dkey-152b24.7 | ENSDARG00000099715 | 26 | 1.658 | 0.734 | - | - | - | - | 0.924 | - | - | - | si:dkey-152b24.7 [Source:ZFIN;Acc:ZDB-GENE-100921-77] |
| 30. | zgc:112964 | ENSDARG00000101200 | 4751 | 1.657 | - | 0.846 | - | - | - | - | - | 0.811 | - | zgc:112964 [Source:ZFIN;Acc:ZDB-GENE-050306-47] |
| 31. | adhfe1 | ENSDARG00000053518 | 499 | 1.654 | - | 0.752 | - | - | - | - | - | 0.902 | - | alcohol dehydrogenase, iron containing, 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2070] |
| 32. | si:dkey-26g8.10 | si:dkey-26g8.10 | 100 | 1.649 | - | - | 0.741 | - | - | 0.908 | - | - | - | |
| 33. | CU856237.1 | CU856237.1 | 153 | 1.648 | 0.747 | - | - | - | - | 0.901 | - | - | - | |
| 34. | uhrf1bp1l | ENSDARG00000004055 | 419 | 1.637 | - | 0.796 | - | - | - | 0.841 | - | - | - | UHRF1 binding protein 1-like [Source:ZFIN;Acc:ZDB-GENE-041210-177] |
| 35. | ttpal | ENSDARG00000070644, ENSDARG00000112925 | 471 | 1.633 | - | 0.928 | - | - | - | 0.705 | - | - | - | tocopherol (alpha) transfer protein-like [Source:ZFIN;Acc:ZDB-GENE-030131-296] |
| 36. | nr1d2a | ENSDARG00000003820 | 452 | 1.629 | - | - | - | - | - | 0.860 | - | 0.769 | - | nuclear receptor subfamily 1, group D, member 2a [Source:ZFIN;Acc:ZDB-GENE-040504-1] |
| 37. | pemt | ENSDARG00000103614 | 474 | 1.615 | - | 0.739 | - | - | - | 0.876 | - | - | - | phosphatidylethanolamine N-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-040426-719] |
| 38. | si:dkey-23c22.4 | si:dkey-23c22.4 | 556 | 1.613 | 0.745 | 0.868 | - | - | - | - | - | - | - | |
| 39. | ikbkb | ENSDARG00000079123 | 498 | 1.613 | - | 0.815 | - | - | - | 0.798 | - | - | - | inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta [Source:ZFIN;Acc:ZDB-GENE-071115-2] |
| 40. | pigl | ENSDARG00000067752, ENSDARG00000116105 | 282 | 1.611 | 0.775 | - | - | - | - | - | - | 0.836 | - | phosphatidylinositol glycan anchor biosynthesis, class L [Source:ZFIN;Acc:ZDB-GENE-050506-60] |
| 41. | zgc:110269 | ENSDARG00000012325 | 691 | 1.599 | - | 0.797 | - | - | - | - | - | 0.802 | - | zgc:110269 [Source:ZFIN;Acc:ZDB-GENE-050417-81] |
| 42. | lrata | ENSDARG00000037278, ENSDARG00000112503 | 1510 | 1.598 | - | - | - | - | - | 0.771 | - | 0.827 | - | lecithin retinol acyltransferase a [Source:ZFIN;Acc:ZDB-GENE-060720-1] |
| 43. | reep3l | reep3l | 608 | 1.594 | - | 0.851 | - | - | - | 0.743 | - | - | - | |
| 44. | FAM3D | ENSDARG00000091625 | 1392 | 1.593 | - | - | - | - | - | 0.738 | - | 0.855 | - | family with sequence similarity 3 member D [Source:HGNC Symbol;Acc:HGNC:18665] |
| 45. | haao | ENSDARG00000076487 | 143 | 1.589 | - | 0.712 | - | - | - | 0.877 | - | - | - | 3-hydroxyanthranilate 3,4-dioxygenase [Source:ZFIN;Acc:ZDB-GENE-041114-89] |
| 46. | ppcdc | ENSDARG00000033020, ENSDARG00000109858 | 563 | 1.568 | - | 0.824 | - | - | - | - | - | 0.744 | - | phosphopantothenoylcysteine decarboxylase [Source:ZFIN;Acc:ZDB-GENE-040426-1749] |
| 47. | SLC46A3 | ENSDARG00000077313 | 162 | 1.562 | 0.705 | - | - | - | - | 0.857 | - | - | - | solute carrier family 46, member 3 [Source:ZFIN;Acc:ZDB-GENE-100105-2] |
| 48. | gab1 | ENSDARG00000037018 | 1489 | 1.558 | - | - | - | - | - | 0.701 | - | 0.857 | - | GRB2-associated binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2674] |
| 49. | sphk2 | ENSDARG00000069893 | 1518 | 1.554 | - | 0.758 | - | - | - | 0.796 | - | - | - | sphingosine kinase 2 [Source:ZFIN;Acc:ZDB-GENE-100922-225] |
| 50. | DNAJC16_1 | DNAJC16_1 | 245 | 1.528 | 0.733 | - | - | - | - | 0.795 | - | - | - | |
| 51. | foxi3a | ENSDARG00000055926 | 749 | 1.518 | - | 0.777 | - | - | - | 0.741 | - | - | - | forkhead box I3a [Source:ZFIN;Acc:ZDB-GENE-031126-3] |
| 52. | SPATS2 | SPATS2 | 1124 | 1.496 | - | 0.730 | - | - | - | - | - | 0.766 | - | |
| 53. | golph3l | ENSDARG00000036943 | 568 | 1.496 | - | 0.761 | - | - | - | - | - | 0.735 | - | golgi phosphoprotein 3-like [Source:ZFIN;Acc:ZDB-GENE-051113-168] |
| 54. | scamp2l | ENSDARG00000017010 | 491 | 1.489 | - | - | - | - | - | 0.709 | - | 0.780 | - | secretory carrier membrane protein 2, like [Source:ZFIN;Acc:ZDB-GENE-030131-6432] |
| 55. | wu:fb52c12 | wu:fb52c12 | 763 | 1.486 | - | 0.750 | - | - | - | 0.736 | - | - | - | |
| 56. | mrps5 | ENSDARG00000062209, ENSDARG00000114003 | 619 | 1.467 | - | 0.711 | - | - | - | - | - | 0.756 | - | mitochondrial ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-060929-264] |
| 57. | hat1 | ENSDARG00000034916 | 5712 | 1.442 | - | 0.729 | - | - | - | 0.713 | - | - | - | histone acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040912-99] |
| 58. | rsrc1 | ENSDARG00000033987 | 552 | 1.433 | - | 0.731 | - | - | - | 0.702 | - | - | - | arginine/serine-rich coiled-coil 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2374] |
| 59. | si:ch211-113a14.19_2 | ENSDARG00000109926, ENSDARG00000111536, ENSDARG00000113481, ENSDARG00000113707, ENSDARG00000115875 | 17 | 1.424 | - | - | - | 0.721 | 0.703 | - | - | - | - | si:ch211-113a14.19 [Source:ZFIN;Acc:ZDB-GENE-121214-198] |
| 60. | BX537137.1 | ENSDARG00000092436 | 77 | 0.992 | - | - | - | - | - | 0.992 | - | - | - | gastrula zinc finger protein XlCGF7.1 [Source:NCBI gene;Acc:100148466] |
| 61. | chtopb | ENSDARG00000070430 | 29 | 0.99 | - | - | - | - | - | 0.990 | - | - | - | chromatin target of PRMT1b [Source:ZFIN;Acc:ZDB-GENE-061013-712] |
| 62. | BX664721.1 | ENSDARG00000051804 | 21 | 0.99 | - | - | - | - | - | 0.990 | - | - | - | |
| 63. | CR848784.2 | ENSDARG00000111157 | 16 | 0.99 | - | - | - | - | - | 0.990 | - | - | - | |
| 64. | CU104716.1 | ENSDARG00000109332 | 12 | 0.99 | - | - | - | - | - | 0.990 | - | - | - | |
| 65. | si:dkey-263l8.2 | si:dkey-263l8.2 | 3 | 0.99 | - | - | - | - | - | 0.990 | - | - | - | |
| 66. | CT025771.1 | ENSDARG00000117721 | 13 | 0.99 | - | - | - | - | - | 0.990 | - | - | - | |
| 67. | si:ch1073-263o8.2 | ENSDARG00000090870 | 66 | 0.99 | - | - | - | - | - | 0.990 | - | - | - | si:ch1073-263o8.2 [Source:ZFIN;Acc:ZDB-GENE-030131-5362] |
| 68. | si:dkey-201l21.4 | ENSDARG00000076398 | 5 | 0.99 | - | - | - | - | - | 0.990 | - | - | - | si:dkey-201l21.4 [Source:ZFIN;Acc:ZDB-GENE-060531-98] |
| 69. | si:dkey-117i10.1 | ENSDARG00000062537 | 3 | 0.99 | - | - | - | - | - | 0.990 | - | - | - | si:dkey-117i10.1 [Source:ZFIN;Acc:ZDB-GENE-091204-371] |
| 70. | myo10l3 | ENSDARG00000074143 | 49 | 0.99 | - | - | - | - | - | 0.990 | - | - | - | myosin X-like 3 [Source:ZFIN;Acc:ZDB-GENE-070912-237] |
| 71. | cfhl1 | ENSDARG00000105212, ENSDARG00000111582 | 35 | 0.99 | - | - | - | - | - | 0.990 | - | - | - | complement factor H like 1 [Source:ZFIN;Acc:ZDB-GENE-050208-342] |
| 72. | tm7sf2 | ENSDARG00000032816, ENSDARG00000116444 | 70 | 0.99 | - | - | - | - | - | 0.990 | - | - | - | transmembrane 7 superfamily member 2 [Source:ZFIN;Acc:ZDB-GENE-041212-19] |
| 73. | si:ch211-264f7.2 | si:ch211-264f7.2 | 2 | 0.99 | - | - | - | - | - | 0.990 | - | - | - | |
| 74. | CABZ01057940.1 | CABZ01057940.1 | 4 | 0.99 | - | - | - | - | - | 0.990 | - | - | - | |
| 75. | hephl1 | hephl1 | 20 | 0.99 | - | - | - | - | - | 0.990 | - | - | - | |
| 76. | suv39h1a | ENSDARG00000026799 | 18 | 0.99 | - | - | - | - | - | 0.990 | - | - | - | suppressor of variegation 3-9 homolog 1a [Source:ZFIN;Acc:ZDB-GENE-040801-111] |
| 77. | CU633486.1 | ENSDARG00000098008 | 3 | 0.99 | - | - | - | - | - | 0.990 | - | - | - | |
| 78. | BX004816.2 | ENSDARG00000087012 | 3 | 0.99 | - | - | - | - | - | 0.990 | - | - | - | |
| 79. | insl5a | ENSDARG00000070966, ENSDARG00000112563 | 45 | 0.99 | - | - | - | - | - | 0.990 | - | - | - | insulin-like 5a [Source:ZFIN;Acc:ZDB-GENE-050310-4] |
| 80. | BX571811.2 | ENSDARG00000105655 | 11 | 0.99 | - | - | - | - | - | 0.990 | - | - | - | |
| 81. | GRAMD2_1 | GRAMD2_1 | 12 | 0.99 | - | - | - | - | - | 0.990 | - | - | - | |
| 82. | CABZ01073740.1 | CABZ01073740.1 | 27 | 0.99 | - | - | - | - | - | 0.990 | - | - | - | |
| 83. | itk | ENSDARG00000017565, ENSDARG00000113497, ENSDARG00000114923 | 4 | 0.99 | - | - | - | - | - | 0.990 | - | - | - | IL2 inducible T cell kinase [Source:ZFIN;Acc:ZDB-GENE-990415-261] |
| 84. | si:rp71-78h1.1 | si:rp71-78h1.1 | 2 | 0.99 | - | - | - | - | - | 0.990 | - | - | - | |
| 85. | zgc:171452 | ENSDARG00000074069 | 6 | 0.99 | - | - | - | - | - | 0.990 | - | - | - | zgc:171452 [Source:ZFIN;Acc:ZDB-GENE-071004-84] |
| 86. | nobox | 5 | 0.99 | - | - | - | - | - | 0.990 | - | - | - | NOBOX oogenesis homeobox | |
| 87. | slco1f3 | ENSDARG00000105691 | 6 | 0.99 | - | - | - | - | - | 0.990 | - | - | - | solute carrier organic anion transporter family, member 1F3 [Source:ZFIN;Acc:ZDB-GENE-080212-5] |
| 88. | BX322657.1 | ENSDARG00000102448 | 23 | 0.99 | - | - | - | - | - | 0.990 | - | - | - | |
| 89. | cd4 | cd4 | 4 | 0.99 | - | - | - | - | - | 0.990 | - | - | - | |
| 90. | si:dkey-234l24.10 | si:dkey-234l24.10 | 2 | 0.99 | - | - | - | - | - | 0.990 | - | - | - | |
| 91. | actr2b | ENSDARG00000070076 | 49 | 0.99 | - | - | - | - | - | 0.990 | - | - | - | ARP2 actin related protein 2b homolog [Source:ZFIN;Acc:ZDB-GENE-050410-4] |
| 92. | zgc:158580 | zgc:158580 | 2 | 0.99 | - | - | - | - | - | 0.990 | - | - | - | |
| 93. | nceh1b | nceh1b | 22 | 0.99 | - | - | - | - | - | 0.990 | - | - | - | |
| 94. | U6_26 | U6_26 | 2 | 0.99 | - | - | - | - | - | 0.990 | - | - | - | |
| 95. | GABRR3 | GABRR3 | 3 | 0.99 | - | - | - | - | - | 0.990 | - | - | - | |
| 96. | msxa | msxa | 263 | 0.99 | - | - | - | - | - | 0.990 | - | - | - | |
| 97. | lsm14b | ENSDARG00000025386 | 23 | 0.989 | - | - | - | - | - | 0.989 | - | - | - | LSM family member 14B [Source:ZFIN;Acc:ZDB-GENE-040426-779] |
| 98. | B3GNT2 | B3GNT2 | 348 | 0.989 | - | - | - | - | - | 0.989 | - | - | - | |
| 99. | si:ch73-280o22.2 | ENSDARG00000077072 | 67 | 0.987 | - | - | - | - | - | 0.987 | - | - | - | si:ch73-280o22.2 [Source:ZFIN;Acc:ZDB-GENE-141216-272] |
| 100. | gbp2 | ENSDARG00000038669 | 91 | 0.987 | - | - | - | - | - | 0.987 | - | - | - | guanylate binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-070912-618] |
There are 1296 more genes with r >= 0.7
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C.
Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA