Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for pcdh1a3

Gene Name Gene ID Reads Annotation
pcdh1a3 ENSDARG00000103602 4 protocadherin 1 alpha 3 [Source:ZFIN;Acc:ZDB-GENE-050202-3]










Genes with expression patterns similar to pcdh1a3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pcdh1a3 ENSDARG00000103602 4 3 - 1.000 1.000 1.000 - - - - - protocadherin 1 alpha 3 [Source:ZFIN;Acc:ZDB-GENE-050202-3]
2. CABZ01067072.1 CABZ01067072.1 17 2 - 1.000 - 1.000 - - - - -
3. DEF6 DEF6 19 1.994 - 1.000 0.994 - - - - - -
4. C4H12orf55 C4H12orf55 14 1.978 - 0.990 0.988 - - - - - -
5. CABZ01081748.1 ENSDARG00000102139 31 1.977 - 0.977 - 1.000 - - - - - gastrula zinc finger protein XlCGF8.2DB-like [Source:NCBI gene;Acc:100007471]
6. ZNF70_6 ZNF70_6 15 1.854 - 0.854 - 1.000 - - - - -
7. si:dkey-85n7.8 ENSDARG00000095793 31 1.751 - 1.000 - 0.751 - - - - - si:dkey-85n7.8 [Source:ZFIN;Acc:ZDB-GENE-110411-127]
8. runx2b ENSDARG00000059233 106 1.717 - 1.000 0.717 - - - - - - runt-related transcription factor 2b [Source:ZFIN;Acc:ZDB-GENE-040629-4]
9. si:dkey-189d19.2 si:dkey-189d19.2 45 1.567 - 0.766 0.801 - - - - - -
10. cart4 ENSDARG00000070142 55 1.474 - 0.733 - 0.741 - - - - - cocaine- and amphetamine-regulated transcript 4 [Source:ZFIN;Acc:ZDB-GENE-060503-863]
11. rhobtb2b ENSDARG00000089340 4 1 - - - 1.000 - - - - - Rho related BTB domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-071125-1]
12. FBXO10_1 FBXO10_1 0 1 - - - 1.000 - - - - -
13. nphs2 ENSDARG00000042850 31 1 - 1.000 - - - - - - - nephrosis 2, idiopathic, steroid-resistant (podocin) [Source:ZFIN;Acc:ZDB-GENE-051102-2]
14. si:dkey-222f2.3 si:dkey-222f2.3 8 1 - - - 1.000 - - - - -
15. C11H3orf14 C11H3orf14 15 1 - - - 1.000 - - - - -
16. GRAMD2_1 GRAMD2_1 12 1 - - - 1.000 - - - - -
17. spg20a 8 1 - - - 1.000 - - - - - spastic paraplegia 20a (Troyer syndrome), transcript variant X1
18. CU681840.1 CU681840.1 3 1 - - - 1.000 - - - - -
19. tmem144b ENSDARG00000036247 2 1 - - 1.000 - - - - - - transmembrane protein 144b [Source:ZFIN;Acc:ZDB-GENE-041010-58]
20. ompa ENSDARG00000105218 3 1 - - - 1.000 - - - - - olfactory marker protein a [Source:ZFIN;Acc:ZDB-GENE-050626-118]
21. PSMB11 PSMB11 3 1 - - - 1.000 - - - - -
22. CR339051.1 CR339051.1 9 1 - - - 1.000 - - - - -
23. CABZ01100187.1 CABZ01100187.1 191 1 - 1.000 - - - - - - -
24. FRMD7 ENSDARG00000068958 17 1 - - - 1.000 - - - - - FERM domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-060825-67]
25. C7H10orf112 C7H10orf112 15 1 - - - 1.000 - - - - -
26. si:dkey-233e3.5 si:dkey-233e3.5 7 1 - - - 1.000 - - - - -
27. C20H1orf95 C20H1orf95 12 1 - 1.000 - - - - - - -
28. si:dkey-285e18.5 ENSDARG00000093665 5 1 - - - 1.000 - - - - - si:dkey-285e18.5 [Source:ZFIN;Acc:ZDB-GENE-120703-44]
29. Metazoa_SRP_23 Metazoa_SRP_23 3 1 - - - 1.000 - - - - -
30. FP103005.1 ENSDARG00000099852 4 1 - - - 1.000 - - - - -
31. gabrr2b ENSDARG00000014057 9 1 - 1.000 - - - - - - - gamma-aminobutyric acid (GABA) A receptor, rho 2b [Source:ZFIN;Acc:ZDB-GENE-041014-174]
32. si:dkey-10o6.2 ENSDARG00000074628 22 1 - 1.000 - - - - - - - si:dkey-10o6.2 [Source:ZFIN;Acc:ZDB-GENE-070705-284]
33. si:ch211-188c16.1 ENSDARG00000077288 16 1 - 1.000 - - - - - - - si:ch211-188c16.1 [Source:ZFIN;Acc:ZDB-GENE-070912-162]
34. pi15b ENSDARG00000061292 1 1 - - - 1.000 - - - - - peptidase inhibitor 15b [Source:ZFIN;Acc:ZDB-GENE-070912-590]
35. rnasekb ENSDARG00000104458 13 1 - - 1.000 - - - - - - ribonuclease, RNase K b [Source:ZFIN;Acc:ZDB-GENE-060825-160]
36. lhx2a ENSDARG00000037964 3 1 - - - 1.000 - - - - - LIM homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-091118-109]
37. gb:am422109 gb:am422109 3 1 - 1.000 - - - - - - -
38. RBBP6 ENSDARG00000037919 3 1 - - - 1.000 - - - - - retinoblastoma binding protein 6 [Source:ZFIN;Acc:ZDB-GENE-040930-5]
39. CABZ01046996.1 ENSDARG00000111833 1 1 - - - 1.000 - - - - -
40. si:dkey-11f4.20 ENSDARG00000100887 38 1 - - - 1.000 - - - - - si:dkey-11f4.20 [Source:ZFIN;Acc:ZDB-GENE-070912-359]
41. klf5b ENSDARG00000062106 7 1 - - - 1.000 - - - - - Kruppel-like factor 5b [Source:ZFIN;Acc:ZDB-GENE-080424-4]
42. BX005234.1 ENSDARG00000097761 3 1 - - - 1.000 - - - - -
43. crygm2d15 ENSDARG00000069826 48 1 - - - 1.000 - - - - - crystallin, gamma M2d15 [Source:ZFIN;Acc:ZDB-GENE-040718-322]
44. lrrc9 ENSDARG00000054352 25 1 - - - 1.000 - - - - - leucine rich repeat containing 9 [Source:ZFIN;Acc:ZDB-GENE-080917-56]
45. or132-5 ENSDARG00000056277 0 1 - - - 1.000 - - - - - odorant receptor, family H, subfamily 132, member 5 [Source:ZFIN;Acc:ZDB-GENE-070806-21]
46. si:dkeyp-15f12.4 si:dkeyp-15f12.4 2 1 - 1.000 - - - - - - -
47. si:ch211-232m10.6 ENSDARG00000070931 2 1 - - - 1.000 - - - - - si:ch211-232m10.6 [Source:ZFIN;Acc:ZDB-GENE-060503-879]
48. CU633857.1 ENSDARG00000115315 21 1 - - - 1.000 - - - - - multiciliate differentiation and DNA synthesis associated cell cycle protein [Source:NCBI gene;Acc:100537904]
49. BX510909.1 ENSDARG00000104294 5 1 - 1.000 - - - - - - -
50. acoxl ENSDARG00000020149 14 1 - 1.000 - - - - - - - acyl-CoA oxidase-like [Source:ZFIN;Acc:ZDB-GENE-081107-18]
51. ighz ENSDARG00000096280 2 1 - 1.000 - - - - - - - immunoglobulin heavy constant zeta [Source:ZFIN;Acc:ZDB-GENE-040513-8]
52. zgc:162592 ENSDARG00000101787 5 1 - 1.000 - - - - - - - zgc:162592 [Source:ZFIN;Acc:ZDB-GENE-030131-5400]
53. PLEKHG4B_1 PLEKHG4B_1 2 1 - - 1.000 - - - - - -
54. si:dkey-206f10.5 si:dkey-206f10.5 1 1 - - - 1.000 - - - - -
55. wnt8b ENSDARG00000006911 98 1 - 1.000 - - - - - - - wingless-type MMTV integration site family, member 8b [Source:ZFIN;Acc:ZDB-GENE-990415-279]
56. pdgfra ENSDARG00000070494, ENSDARG00000113952 6 1 - 1.000 - - - - - - - platelet-derived growth factor receptor, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-208]
57. CACNA1H CACNA1H 34 1 - 1.000 - - - - - - -
58. si:ch211-117m20.4 ENSDARG00000094286 7 1 - - - 1.000 - - - - - si:ch211-117m20.4 [Source:ZFIN;Acc:ZDB-GENE-060526-20]
59. zgc:175107 ENSDARG00000075417 39 1 - - - 1.000 - - - - - zgc:175107 [Source:ZFIN;Acc:ZDB-GENE-080220-38]
60. slc46a3 ENSDARG00000077313 14 1 - 1.000 - - - - - - - solute carrier family 46, member 3 [Source:ZFIN;Acc:ZDB-GENE-100105-2]
61. mxra5b ENSDARG00000076309 190 1 - - - 1.000 - - - - - matrix-remodelling associated 5b [Source:ZFIN;Acc:ZDB-GENE-081104-119]
62. si:dkey-179o14.4 si:dkey-179o14.4 2 1 - - - 1.000 - - - - -
63. tcnl ENSDARG00000068088 0 1 - - - 1.000 - - - - - transcobalamin like [Source:ZFIN;Acc:ZDB-GENE-060531-123]
64. ulk3 ENSDARG00000101661 69 1 - 1.000 - - - - - - - unc-51 like kinase 3 [Source:ZFIN;Acc:ZDB-GENE-070410-33]
65. si:ch211-209n20.58 si:ch211-209n20.58 1 1 - - - 1.000 - - - - -
66. iqcd ENSDARG00000035551 7 1 - - - 1.000 - - - - - IQ motif containing D [Source:ZFIN;Acc:ZDB-GENE-060526-200]
67. si:dkey-49n23.1 ENSDARG00000040920 3 1 - - - 1.000 - - - - - si:dkey-49n23.1 [Source:ZFIN;Acc:ZDB-GENE-050208-762]
68. SNORA3 SNORA3 0 1 - - - 1.000 - - - - -
69. zgc:173552 ENSDARG00000105345, ENSDARG00000110909, ENSDARG00000112175 0 1 - - - 1.000 - - - - - zgc:173552 [Source:ZFIN;Acc:ZDB-GENE-080220-24]
70. CAPG CAPG 17 1 - - 1.000 - - - - - -
71. si:dkey-60b12.9 si:dkey-60b12.9 3 1 - - - 1.000 - - - - -
72. KIF9 ENSDARG00000031693 11 1 - - - 1.000 - - - - - kinesin family member 9 [Source:ZFIN;Acc:ZDB-GENE-160728-129]
73. hs3st2 ENSDARG00000059616 2 1 - - - 1.000 - - - - - heparan sulfate (glucosamine) 3-O-sulfotransferase 2 [Source:ZFIN;Acc:ZDB-GENE-070202-7]
74. TTC34 ENSDARG00000091221 3 1 - - 1.000 - - - - - - tetratricopeptide repeat domain 34 [Source:ZFIN;Acc:ZDB-GENE-140106-266]
75. or111-9 ENSDARG00000092238 0 1 - - - 1.000 - - - - - odorant receptor, family D, subfamily 111, member 9 [Source:ZFIN;Acc:ZDB-GENE-010308-11]
76. si:ch211-51n3.1 si:ch211-51n3.1 26 1 - 1.000 - - - - - - -
77. ASPG_1 ASPG_1 2 1 - - - 1.000 - - - - -
78. ptprub_1 ENSDARG00000101081 0 1 - - - 1.000 - - - - - protein tyrosine phosphatase, receptor type, U, b [Source:ZFIN;Acc:ZDB-GENE-030131-7036]
79. CABZ01075923.1 CABZ01075923.1 6 1 - - - 1.000 - - - - -
80. grin1b ENSDARG00000025728 4 1 - - - 1.000 - - - - - glutamate receptor, ionotropic, N-methyl D-aspartate 1b [Source:ZFIN;Acc:ZDB-GENE-051202-2]
81. RNASEH2C_1 RNASEH2C_1 10 1 - 1.000 - - - - - - -
82. si:dkey-233h12.4 si:dkey-233h12.4 2 1 - - - 1.000 - - - - -
83. smad6b ENSDARG00000031763 12 1 - 1.000 - - - - - - - SMAD family member 6b [Source:ZFIN;Acc:ZDB-GENE-050419-198]
84. BX569778.1 BX569778.1 36 1 - - - 1.000 - - - - -
85. si:rp71-1c10.7 si:rp71-1c10.7 3 1 - 1.000 - - - - - - -
86. AGAP3_1 AGAP3_1 18 1 - 1.000 - - - - - - -
87. cers4a ENSDARG00000031387 19 1 - - - 1.000 - - - - - ceramide synthase 4a [Source:ZFIN;Acc:ZDB-GENE-020808-1]
88. si:ch211-182e10.4 ENSDARG00000070661, ENSDARG00000070757 1 1 - - - 1.000 - - - - - si:ch211-182e10.4 [Source:ZFIN;Acc:ZDB-GENE-041014-76]
89. KLHDC8A ENSDARG00000061000 13 1 - - - 1.000 - - - - - kelch domain containing 8A [Source:ZFIN;Acc:ZDB-GENE-120810-3]
90. NWD1 ENSDARG00000076110 3 1 - - - 1.000 - - - - - NACHT and WD repeat domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-071116-8]
91. sorcs3b ENSDARG00000077349 72 1 - 1.000 - - - - - - - sortilin related VPS10 domain containing receptor 3b [Source:ZFIN;Acc:ZDB-GENE-131121-455]
92. CABZ01084273.1 CABZ01084273.1 16 1 - - - 1.000 - - - - -
93. cers3b ENSDARG00000036337 1 1 - - - 1.000 - - - - - ceramide synthase 3b [Source:ZFIN;Acc:ZDB-GENE-080220-32]
94. BX324198.1 BX324198.1 12 1 - - - 1.000 - - - - -
95. CT025771.1 ENSDARG00000117721 13 1 - - - 1.000 - - - - -
96. dlx1a ENSDARG00000013125 142 1 - 1.000 - - - - - - - distal-less homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-990415-48]
97. MAD2L2 ENSDARG00000042456 0 1 - - - 1.000 - - - - - mitotic arrest deficient 2 like 2 [Source:ZFIN;Acc:ZDB-GENE-050417-61]
98. slc17a8 ENSDARG00000057728, ENSDARG00000109791 8 1 - - - 1.000 - - - - - solute carrier family 17 (vesicular glutamate transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-060503-416]
99. si:ch211-12e13.2 si:ch211-12e13.2 3 1 - - 1.000 - - - - - -
100. med8 ENSDARG00000114425 7 1 - - - 1.000 - - - - - mediator complex subunit 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2091]

There are 537 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA