Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for pcdh1a

Gene Name Gene ID Reads Annotation
pcdh1a ENSDARG00000062720 276 protocadherin 1a [Source:ZFIN;Acc:ZDB-GENE-091116-32]










Genes with expression patterns similar to pcdh1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pcdh1a ENSDARG00000062720 276 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 protocadherin 1a [Source:ZFIN;Acc:ZDB-GENE-091116-32]
2. scdb ENSDARG00000030265 271 1.793 - - - - - 0.920 0.873 - - stearoyl-CoA desaturase b [Source:ZFIN;Acc:ZDB-GENE-050522-12]
3. BX465851.1 BX465851.1 237 1.696 - - - - - 0.828 0.868 - -
4. syt2a ENSDARG00000025206 681 1.683 - - - - - 0.858 0.825 - - synaptotagmin IIa [Source:ZFIN;Acc:ZDB-GENE-060503-315]
5. vsnl1a ENSDARG00000023228 1584 1.679 - - - - - 0.938 0.741 - - visinin-like 1a [Source:ZFIN;Acc:ZDB-GENE-041001-211]
6. AP3B2 1874 1.674 - 0.771 - - - 0.903 - - - adaptor related protein complex 3 beta 2 subunit, transcript variant X2
7. igsf9a ENSDARG00000075864 1870 1.665 0.770 - - - - 0.895 - - - immunoglobulin superfamily, member 9a [Source:ZFIN;Acc:ZDB-GENE-060503-288]
8. PMFBP1 ENSDARG00000101917 292 1.665 - 0.810 - - - 0.855 - - - polyamine modulated factor 1 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-131127-619]
9. cntn4 ENSDARG00000098161, ENSDARG00000109387 437 1.659 - 0.758 - - - 0.901 - - - contactin 4 [Source:ZFIN;Acc:ZDB-GENE-060929-776]
10. arl6ip4 ENSDARG00000105036, ENSDARG00000110324, ENSDARG00000116805 1142 1.655 - - - - - 0.858 0.797 - - ADP-ribosylation factor-like 6 interacting protein 4 [Source:ZFIN;Acc:ZDB-GENE-050522-405]
11. SGIP1 SGIP1 236 1.65 - 0.892 - - - 0.758 - - -
12. nrn1a ENSDARG00000071860 1311 1.642 - 0.720 - - - 0.922 - - - neuritin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-212]
13. dixdc1a ENSDARG00000025302 716 1.616 - 0.746 - - - 0.870 - - - DIX domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030721-2]
14. fgf17 ENSDARG00000102778 136 1.603 - 0.892 - - - 0.711 - - - fibroblast growth factor 17 [Source:ZFIN;Acc:ZDB-GENE-040621-1]
15. GANAB_2 GANAB_2 3210 1.594 - - - - - 0.791 0.803 - -
16. myt1a ENSDARG00000074030, ENSDARG00000116035 2839 1.591 - 0.705 - - - 0.886 - - - myelin transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3885]
17. fndc5b ENSDARG00000035895 366 1.58 - 0.847 - - - 0.733 - - - fibronectin type III domain containing 5b [Source:ZFIN;Acc:ZDB-GENE-060503-916]
18. CABZ01048373.1 CABZ01048373.1 81 1.578 0.805 - - - - - 0.773 - -
19. srpk1b ENSDARG00000031560 2079 1.571 - 0.832 - - - 0.739 - - - SRSF protein kinase 1b [Source:ZFIN;Acc:ZDB-GENE-070112-2292]
20. zgc:113372 ENSDARG00000053263 178 1.57 - 0.791 - - - - 0.779 - - zgc:113372 [Source:ZFIN;Acc:ZDB-GENE-050913-150]
21. vangl2 ENSDARG00000027397 2418 1.556 - - - - - 0.791 0.765 - - VANGL planar cell polarity protein 2 [Source:ZFIN;Acc:ZDB-GENE-020507-3]
22. NPBWR2 NPBWR2 132 1.539 - - - - - 0.712 0.827 - -
23. si:ch211-194k22.8 ENSDARG00000096711 1318 1.532 - - - - - 0.735 0.797 - - si:ch211-194k22.8 [Source:ZFIN;Acc:ZDB-GENE-030131-1820]
24. lpar6b ENSDARG00000069441 65 1.531 - 0.804 - - - - 0.727 - - lysophosphatidic acid receptor 6b [Source:ZFIN;Acc:ZDB-GENE-110408-67]
25. wrnip1 ENSDARG00000005218 695 1.518 0.714 0.804 - - - - - - - Werner helicase interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2415]
26. tapbp tapbp 70 1.509 - 0.789 - - - - 0.720 - -
27. apof ENSDARG00000090980 145 1.505 - 0.789 - - - 0.716 - - - apolipoprotein F [Source:ZFIN;Acc:ZDB-GENE-031204-36]
28. foxo3a ENSDARG00000023058 2554 1.504 - - - - - 0.804 0.700 - - forkhead box O3A [Source:ZFIN;Acc:ZDB-GENE-050116-1]
29. MAN1A2 ENSDARG00000041728 359 1.491 - - - - - 0.738 0.753 - - mannosidase, alpha, class 1A, member 2 [Source:ZFIN;Acc:ZDB-GENE-070912-390]
30. si:ch211-212k5.1 ENSDARG00000110637 337 1.49 0.781 - - - - 0.709 - - - si:ch211-212k5.1 [Source:ZFIN;Acc:ZDB-GENE-110914-19]
31. nin ENSDARG00000060298 1558 1.486 - - - - - 0.778 0.708 - - ninein (GSK3B interacting protein) [Source:ZFIN;Acc:ZDB-GENE-070725-1]
32. CABZ01057907.1 CABZ01057907.1 1140 1.484 - - - - - 0.737 0.747 - -
33. ogt.1 ENSDARG00000099455, ENSDARG00000105243 3274 1.456 - - - - - 0.703 0.753 - - O-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9631]
34. C2H1orf21 C2H1orf21 1120 1.455 - - - - - 0.711 0.744 - -
35. GSG2 GSG2 1162 1.451 - - - - - 0.712 0.739 - -
36. tdg tdg 3269 1.451 - - - - - 0.717 0.734 - -
37. polr2b ENSDARG00000098783 90 1.444 0.706 - - - - - 0.738 - - polymerase (RNA) II (DNA directed) polypeptide B [Source:ZFIN;Acc:ZDB-GENE-041008-1]
38. mbd3b ENSDARG00000042029, ENSDARG00000061810 4561 0.979 - - - - - 0.979 - - - methyl-CpG binding domain protein 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9792]
39. rap2ip rap2ip 681 0.973 - - - - - 0.973 - - -
40. MAP1A MAP1A 847 0.967 - - - - - 0.967 - - -
41. PHKA2 ENSDARG00000030687 280 0.966 - 0.966 - - - - - - - phosphorylase kinase, alpha 2 (liver) [Source:ZFIN;Acc:ZDB-GENE-130422-1]
42. stxbp1a ENSDARG00000001994 5154 0.962 - - - - - 0.962 - - - syntaxin binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050626-106]
43. atp6v0cb ENSDARG00000036577 3472 0.961 - - - - - 0.961 - - - ATPase H+ transporting V0 subunit cb [Source:ZFIN;Acc:ZDB-GENE-030131-4127]
44. si:ch211-11c15.3 si:ch211-11c15.3 1279 0.96 - - - - - 0.960 - - -
45. dpysl5a ENSDARG00000011141 1827 0.957 - - - - - 0.957 - - - dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
46. hydin ENSDARG00000056764, ENSDARG00000114934 16 0.956 - 0.956 - - - - - - - HYDIN, axonemal central pair apparatus protein [Source:ZFIN;Acc:ZDB-GENE-050419-219]
47. nrxn1a ENSDARG00000061647, ENSDARG00000111866 1069 0.956 - - - - - 0.956 - - - neurexin 1a [Source:ZFIN;Acc:ZDB-GENE-070206-1]
48. celf3a ENSDARG00000034668 2432 0.956 - - - - - 0.956 - - - cugbp, Elav-like family member 3a [Source:ZFIN;Acc:ZDB-GENE-000501-2]
49. slc17a6b ENSDARG00000041150 823 0.955 - - - - - 0.955 - - - solute carrier family 17 (vesicular glutamate transporter), member 6b [Source:ZFIN;Acc:ZDB-GENE-030616-554]
50. pcdh1gc5 ENSDARG00000104826 10052 0.954 - - - - - 0.954 - - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
51. olfm1b ENSDARG00000014053 1392 0.953 - - - - - 0.953 - - - olfactomedin 1b [Source:ZFIN;Acc:ZDB-GENE-040801-228]
52. aldocb ENSDARG00000019702 2111 0.952 - - - - - 0.952 - - - aldolase C, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-030821-1]
53. gap43 ENSDARG00000099744 4114 0.952 - - - - - 0.952 - - - growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
54. ttll7 ENSDARG00000062973 519 0.952 - - - - - 0.952 - - - tubulin tyrosine ligase-like family, member 7 [Source:ZFIN;Acc:ZDB-GENE-070112-2112]
55. stmn2a ENSDARG00000033234 2272 0.952 - - - - - 0.952 - - - stathmin 2a [Source:ZFIN;Acc:ZDB-GENE-041010-85]
56. rtn1b ENSDARG00000021143 1682 0.952 - - - - - 0.952 - - - reticulon 1b [Source:ZFIN;Acc:ZDB-GENE-030710-3]
57. otpa ENSDARG00000014201 2290 0.951 - - - - - 0.951 - - - orthopedia homeobox a [Source:ZFIN;Acc:ZDB-GENE-070216-1]
58. SALL2 ENSDARG00000075116 527 0.951 - - - - - 0.951 - - - spalt-like transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-030829-32]
59. muc13b ENSDARG00000079647 67 0.95 - 0.950 - - - - - - - mucin 13b, cell surface associated [Source:ZFIN;Acc:ZDB-GENE-080220-61]
60. mllt11 ENSDARG00000071026 2518 0.95 - - - - - 0.950 - - - MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
61. ap4m1 ENSDARG00000056871 160 0.949 - 0.949 - - - - - - - adaptor related protein complex 4 subunit mu 1 [Source:ZFIN;Acc:ZDB-GENE-040718-421]
62. relnl relnl 863 0.948 - - - - - 0.948 - - -
63. scrt2 ENSDARG00000056175 4331 0.948 - - - - - 0.948 - - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
64. sncgb ENSDARG00000109715 1014 0.947 - - - - - 0.947 - - - synuclein, gamma b (breast cancer-specific protein 1) [Source:ZFIN;Acc:ZDB-GENE-050522-235]
65. stmn2b ENSDARG00000070537 1586 0.945 - - - - - 0.945 - - - stathmin 2b [Source:ZFIN;Acc:ZDB-GENE-050522-207]
66. nova1 ENSDARG00000020178 4129 0.945 - - - - - 0.945 - - - neuro-oncological ventral antigen 1 [Source:ZFIN;Acc:ZDB-GENE-060526-113]
67. ndrg4 ENSDARG00000103937 1234 0.944 - - - - - 0.944 - - - NDRG family member 4 [Source:ZFIN;Acc:ZDB-GENE-060512-226]
68. slc1a3a ENSDARG00000104431 9888 0.944 - - - - - 0.944 - - - solute carrier family 1 (glial high affinity glutamate transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2159]
69. si:ch1073-357b18.4 ENSDARG00000096602 121 0.944 - 0.944 - - - - - - - si:ch1073-357b18.4 [Source:ZFIN;Acc:ZDB-GENE-121214-213]
70. ROBO3_1 ROBO3_1 468 0.944 - - - - - 0.944 - - -
71. si:ch1073-263o8.2 ENSDARG00000090870 66 0.944 - 0.944 - - - - - - - si:ch1073-263o8.2 [Source:ZFIN;Acc:ZDB-GENE-030131-5362]
72. UFSP1 ENSDARG00000061610 81 0.944 - 0.944 - - - - - - - UFM1-specific peptidase 1 (non-functional) [Source:ZFIN;Acc:ZDB-GENE-070410-124]
73. sncb ENSDARG00000104945 8197 0.943 - - - - - 0.943 - - - synuclein, beta [Source:ZFIN;Acc:ZDB-GENE-040426-1615]
74. tuba1c ENSDARG00000055216 8384 0.943 - - - - - 0.943 - - - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
75. calb2b ENSDARG00000036344 2417 0.942 - - - - - 0.942 - - - calbindin 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1668]
76. scocb ENSDARG00000002217 1844 0.942 - - - - - 0.942 - - - short coiled-coil protein b [Source:ZFIN;Acc:ZDB-GENE-041010-41]
77. basp1 ENSDARG00000053358, ENSDARG00000110677 2590 0.941 - - - - - 0.941 - - - brain abundant, membrane attached signal protein 1 [Source:ZFIN;Acc:ZDB-GENE-070424-158]
78. atp6v1b2 ENSDARG00000043465, ENSDARG00000113422 682 0.94 - - - - - 0.940 - - - ATPase H+ transporting V1 subunit B2 [Source:ZFIN;Acc:ZDB-GENE-030711-4]
79. sez6l2 ENSDARG00000076052 360 0.94 - - - - - 0.940 - - - seizure related 6 homolog (mouse)-like 2 [Source:ZFIN;Acc:ZDB-GENE-091204-189]
80. BX957337.1 BX957337.1 1685 0.94 - - - - - 0.940 - - -
81. CABZ01045617.2 CABZ01045617.2 13 0.939 - 0.939 - - - - - - -
82. atp1b4 ENSDARG00000053262 1337 0.939 - - - - - 0.939 - - - ATPase Na+/K+ transporting subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-070412-1]
83. tfb1m ENSDARG00000040727 142 0.939 - 0.939 - - - - - - - transcription factor B1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-060929-1010]
84. gfap ENSDARG00000025301 5584 0.938 - - - - - 0.938 - - - glial fibrillary acidic protein [Source:ZFIN;Acc:ZDB-GENE-990914-3]
85. cadm3 ENSDARG00000057013 1545 0.938 - - - - - 0.938 - - - cell adhesion molecule 3 [Source:ZFIN;Acc:ZDB-GENE-060512-196]
86. C7H4orf48 C7H4orf48 1455 0.938 - - - - - 0.938 - - -
87. kif5aa ENSDARG00000098936 2428 0.938 - - - - - 0.938 - - - kinesin family member 5A, a [Source:ZFIN;Acc:ZDB-GENE-070912-141]
88. scg2b ENSDARG00000038574 345 0.938 - - - - - 0.938 - - - secretogranin II (chromogranin C), b [Source:ZFIN;Acc:ZDB-GENE-061103-160]
89. rab3ab ENSDARG00000043835 1267 0.937 - - - - - 0.937 - - - RAB3A, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-041210-268]
90. slc6a5_1 ENSDARG00000067964, ENSDARG00000111378 1111 0.937 - - - - - 0.937 - - - solute carrier family 6 (neurotransmitter transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-050105-2]
91. rbfox1 ENSDARG00000014746 2808 0.937 - - - - - 0.937 - - - RNA binding fox-1 homolog 1 [Source:ZFIN;Acc:ZDB-GENE-040927-11]
92. sh3gl2 sh3gl2 1305 0.936 - - - - - 0.936 - - -
93. kif1ab ENSDARG00000062024 794 0.935 - - - - - 0.935 - - - kinesin family member 1Ab [Source:ZFIN;Acc:ZDB-GENE-070912-480]
94. snap25a ENSDARG00000020609 4537 0.933 - - - - - 0.933 - - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
95. adcyap1b ENSDARG00000027740 1539 0.933 - - - - - 0.933 - - - adenylate cyclase activating polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-041010-89]
96. INA INA 950 0.932 - - - - - 0.932 - - -
97. hmp19 2554 0.931 - - - - - 0.931 - - - HMP19 protein
98. hoxc4a ENSDARG00000070338 1382 0.93 - - - - - 0.930 - - - homeobox C4a [Source:ZFIN;Acc:ZDB-GENE-990415-112]
99. gabra5 ENSDARG00000070730 156 0.93 - - - - - 0.930 - - - gamma-aminobutyric acid (GABA) A receptor, alpha 5 [Source:ZFIN;Acc:ZDB-GENE-081104-30]
100. aplp1 ENSDARG00000098368 2317 0.93 - - - - - 0.930 - - - amyloid beta (A4) precursor-like protein 1 [Source:ZFIN;Acc:ZDB-GENE-040319-1]

There are 1303 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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