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Results for pcdh19

Gene Name Gene ID Reads Annotation
pcdh19 ENSDARG00000034344 2378 protocadherin 19 [Source:ZFIN;Acc:ZDB-GENE-030131-4218]










Genes with expression patterns similar to pcdh19

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pcdh19 ENSDARG00000034344 2378 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 protocadherin 19 [Source:ZFIN;Acc:ZDB-GENE-030131-4218]
2. pou3f2a ENSDARG00000070220 817 4.774 - - - 0.722 0.739 0.864 0.841 0.750 0.858 POU class 3 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-139]
3. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 3.985 - - - 0.780 - 0.783 0.791 0.771 0.860 cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
4. hmgb3a ENSDARG00000056725 15668 3.829 - - 0.795 - 0.721 0.758 0.749 - 0.806 high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
5. nbeaa ENSDARG00000070080 862 3.829 - - - 0.772 0.727 0.726 0.791 - 0.813 neurobeachin a [Source:ZFIN;Acc:ZDB-GENE-050320-68]
6. negr1 ENSDARG00000021607 1051 3.72 - - - 0.768 0.737 0.729 0.750 - 0.736 neuronal growth regulator 1 [Source:ZFIN;Acc:ZDB-GENE-040822-27]
7. vezf1a ENSDARG00000008247 1449 3.224 - - - 0.833 0.815 - 0.731 - 0.845 vascular endothelial zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-040108-4]
8. nrarpb ENSDARG00000018958 6225 3.207 - - - 0.849 - 0.704 0.813 - 0.841 NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
9. fabp7a ENSDARG00000007697 5211 3.2 - - - 0.769 0.814 0.908 0.709 - - fatty acid binding protein 7, brain, a [Source:ZFIN;Acc:ZDB-GENE-000627-1]
10. marcksa ENSDARG00000004049 2518 3.193 - - - - - 0.791 0.753 0.750 0.899 myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
11. her4.3 ENSDARG00000070770 613 3.178 - - - - - 0.893 0.736 0.809 0.740 hairy-related 4, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-081030-7]
12. nova2 ENSDARG00000017673 7685 3.165 - - - 0.788 - 0.826 0.812 - 0.739 neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
13. lrrn1 ENSDARG00000060115, ENSDARG00000115960 5175 3.164 - - - 0.790 - - 0.798 0.708 0.868 leucine rich repeat neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-071126-1]
14. AGO1 ENSDARG00000092644 4521 3.147 - 0.703 - - - 0.883 0.841 - 0.720 argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]
15. FP016176.1 FP016176.1 7030 3.14 - 0.759 - - - 0.864 0.772 - 0.745
16. gdf11 ENSDARG00000044924 534 3.132 - - - 0.723 - 0.868 0.753 - 0.788 growth differentiation factor 11 [Source:ZFIN;Acc:ZDB-GENE-040427-2]
17. FGFBP3 FGFBP3 993 3.122 - - - 0.720 0.803 0.839 0.760 - -
18. CABZ01028287.1 CABZ01028287.1 626 3.103 - - - 0.722 0.709 0.815 - - 0.857
19. cntnap2b ENSDARG00000074558, ENSDARG00000109616, ENSDARG00000116850 559 3.087 - - - - - 0.756 0.777 0.770 0.784 contactin associated protein like 2b [Source:NCBI gene;Acc:563345]
20. rimkla ENSDARG00000016830, ENSDARG00000112193 4111 3.086 - 0.780 - - 0.737 0.709 0.860 - - ribosomal modification protein rimK-like family member A [Source:ZFIN;Acc:ZDB-GENE-040912-20]
21. her2 ENSDARG00000038205 3219 3.084 - - - 0.733 - 0.836 0.813 - 0.702 hairy-related 2 [Source:ZFIN;Acc:ZDB-GENE-980526-274]
22. fzd3a ENSDARG00000021664 1958 3.077 - - - - 0.711 0.712 0.824 - 0.830 frizzled class receptor 3a [Source:ZFIN;Acc:ZDB-GENE-990415-225]
23. fam60al 2846 3.073 - - - 0.790 0.799 - 0.715 - 0.769 family with sequence similarity 60, member A, like
24. ssbp4 ENSDARG00000056483 10196 3.066 - 0.707 - 0.760 - 0.813 - 0.786 - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
25. nes ENSDARG00000088805 2710 3.065 - - - 0.708 0.742 0.836 0.779 - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
26. TAF15 ENSDARG00000070019 5102 3.062 - - - 0.746 0.750 - - 0.702 0.864 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-061215-102]
27. SPOCK1 ENSDARG00000074644 794 3.057 - - - - 0.756 0.799 0.780 - 0.722 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:ZFIN;Acc:ZDB-GENE-110428-1]
28. TNRC6C_1 TNRC6C_1 6574 3.049 - 0.801 - 0.796 - 0.708 - 0.744 -
29. si:ch211-10a23.2 ENSDARG00000060656 471 3.048 - - - - - 0.800 0.752 0.706 0.790 si:ch211-10a23.2 [Source:ZFIN;Acc:ZDB-GENE-090313-9]
30. celf3a ENSDARG00000034668 2432 3.034 - - - - - 0.709 0.710 0.755 0.860 cugbp, Elav-like family member 3a [Source:ZFIN;Acc:ZDB-GENE-000501-2]
31. myt1b ENSDARG00000102879 5411 3.012 - - - 0.769 - 0.711 0.824 - 0.708 myelin transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-090313-67]
32. si:ch211-202e12.3 401 2.993 - - - 0.767 - - 0.713 0.741 0.772 si:ch211-202e12.3, transcript variant X6
33. zbtb20 ENSDARG00000005586 195 2.958 - - - - - 0.735 0.711 0.729 0.783 zinc finger and BTB domain containing 20 [Source:ZFIN;Acc:ZDB-GENE-070112-1992]
34. atp6v0cb ENSDARG00000036577 3472 2.954 - 0.701 - - - 0.713 0.815 - 0.725 ATPase H+ transporting V0 subunit cb [Source:ZFIN;Acc:ZDB-GENE-030131-4127]
35. pax6a ENSDARG00000103379 3061 2.952 - - - - 0.706 0.788 0.755 0.703 - paired box 6a [Source:ZFIN;Acc:ZDB-GENE-990415-200]
36. tfdp2 ENSDARG00000042835 1985 2.901 - 0.703 - 0.701 - 0.738 - - 0.759 transcription factor Dp-2 [Source:ZFIN;Acc:ZDB-GENE-030219-104]
37. ewsr1a ENSDARG00000020258, ENSDARG00000113252 11221 2.633 - - 0.908 - - - 0.836 - 0.889 EWS RNA-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2317]
38. CABZ01111990.1 CABZ01111990.1 4374 2.568 - - - - - 0.886 0.846 0.836 -
39. C8H1orf106 C8H1orf106 2690 2.54 - - - - - 0.912 0.823 - 0.805
40. pak2b ENSDARG00000018476 4331 2.532 - 0.776 0.944 - - - 0.812 - - p21 protein (Cdc42/Rac)-activated kinase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-3759]
41. insm1b ENSDARG00000053301 2032 2.507 - - - - 0.734 0.892 - - 0.881 insulinoma-associated 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2602]
42. whsc1l1 8544 2.497 - - - - - 0.852 0.801 - 0.844 Wolf-Hirschhorn syndrome candidate 1-like 1, transcript variant X2
43. tmem35 ENSDARG00000052567 5685 2.488 - - - - - 0.869 0.764 - 0.855 transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
44. pou3f2b ENSDARG00000076262, ENSDARG00000112713 2439 2.483 - - - - - 0.899 0.788 0.796 - POU class 3 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-370]
45. syt11b ENSDARG00000056105 578 2.467 - - - - - 0.858 - 0.817 0.792 synaptotagmin XIb [Source:ZFIN;Acc:ZDB-GENE-090601-7]
46. CYTH2 ENSDARG00000028800 2349 2.448 - - - 0.787 - - 0.829 - 0.832 cytohesin 2 [Source:HGNC Symbol;Acc:HGNC:9502]
47. chd7 ENSDARG00000075211 12085 2.442 - - - 0.816 - 0.836 0.790 - - chromodomain helicase DNA binding protein 7 [Source:ZFIN;Acc:ZDB-GENE-070912-179]
48. ctnnd2b ENSDARG00000003779 964 2.436 - - - 0.778 - 0.840 0.818 - - catenin (cadherin-associated protein), delta 2b [Source:ZFIN;Acc:ZDB-GENE-070912-532]
49. elavl3 ENSDARG00000014420 8644 2.434 - - - - - 0.914 0.779 0.741 - ELAV like neuron-specific RNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-980526-76]
50. SPTBN4_1 ENSDARG00000092624 473 2.433 - - - - - 0.896 0.753 - 0.784 spectrin beta, non-erythrocytic 4 [Source:HGNC Symbol;Acc:HGNC:14896]
51. ptprna ENSDARG00000058646 1327 2.433 - - - - 0.815 0.774 0.844 - - protein tyrosine phosphatase, receptor type, Na [Source:ZFIN;Acc:ZDB-GENE-030131-3511]
52. tia1 ENSDARG00000052536, ENSDARG00000114478 4392 2.43 - - - - 0.752 - - 0.815 0.863 TIA1 cytotoxic granule-associated RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-1506]
53. nhlh2 ENSDARG00000025495 1860 2.426 - - - - - 0.858 0.773 - 0.795 nescient helix loop helix 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1809]
54. smarca5 ENSDARG00000052348 15433 2.424 - - 0.702 - - 0.862 - - 0.860 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:ZFIN;Acc:ZDB-GENE-021125-1]
55. sox19a ENSDARG00000010770, ENSDARG00000110497 4683 2.415 - - - - - 0.807 0.817 - 0.791 SRY (sex determining region Y)-box 19a [Source:ZFIN;Acc:ZDB-GENE-980526-102]
56. dnajc5aa ENSDARG00000042948 2885 2.413 - - - - - 0.830 0.812 - 0.771 DnaJ (Hsp40) homolog, subfamily C, member 5aa [Source:ZFIN;Acc:ZDB-GENE-031113-20]
57. epb41a ENSDARG00000099283 860 2.412 - - - 0.842 - 0.758 0.812 - - erythrocyte membrane protein band 4.1a [Source:ZFIN;Acc:ZDB-GENE-070705-81]
58. pou3f3a ENSDARG00000042032 2835 2.412 - - - - - 0.833 0.754 - 0.825 POU class 3 homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-980526-220]
59. her4.2 ENSDARG00000056729, ENSDARG00000094426 289 2.408 - - - - - 0.891 0.787 0.730 - hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
60. arnt2 ENSDARG00000103697 5731 2.406 - - - - - 0.842 - 0.779 0.785 aryl-hydrocarbon receptor nuclear translocator 2 [Source:ZFIN;Acc:ZDB-GENE-001207-3]
61. api5 ENSDARG00000033597 6655 2.405 - - 0.911 - - 0.792 - 0.702 - apoptosis inhibitor 5 [Source:ZFIN;Acc:ZDB-GENE-030131-395]
62. nat8l ENSDARG00000077256, ENSDARG00000115322 3513 2.396 - - - - - 0.819 0.797 0.780 - N-acetyltransferase 8-like [Source:ZFIN;Acc:ZDB-GENE-030729-4]
63. tuba1c ENSDARG00000055216 8384 2.389 - - - - 0.799 - 0.758 - 0.832 tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
64. mllt11 ENSDARG00000071026 2518 2.387 - - - - - - 0.860 0.768 0.759 MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
65. ppm1g ENSDARG00000075559 6516 2.381 - 0.765 - 0.764 - 0.852 - - - protein phosphatase, Mg2+/Mn2+ dependent, 1G [Source:ZFIN;Acc:ZDB-GENE-030425-4]
66. fyna ENSDARG00000011370 1679 2.381 - - - 0.715 - 0.851 0.815 - - FYN proto-oncogene, Src family tyrosine kinase a [Source:ZFIN;Acc:ZDB-GENE-030903-5]
67. lfng ENSDARG00000037879 11783 2.368 - 0.701 - - - 0.840 - - 0.827 LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-980605-16]
68. epha4b ENSDARG00000011600 3110 2.368 - 0.802 - - - 0.783 0.783 - - eph receptor A4b [Source:ZFIN;Acc:ZDB-GENE-030826-6]
69. gpm6aa ENSDARG00000055455, ENSDARG00000110942 9156 2.365 - - - - 0.775 - 0.790 - 0.800 glycoprotein M6Aa [Source:ZFIN;Acc:ZDB-GENE-030710-7]
70. csdc2a ENSDARG00000041323, ENSDARG00000115932 490 2.363 - - - - - - 0.748 0.793 0.822 cold shock domain containing C2, RNA binding a [Source:ZFIN;Acc:ZDB-GENE-040718-442]
71. sfpq ENSDARG00000011564, ENSDARG00000115611 15626 2.362 - - - 0.752 - - 0.727 - 0.883 splicing factor proline/glutamine-rich [Source:ZFIN;Acc:ZDB-GENE-040426-2452]
72. sox2 ENSDARG00000070913 2763 2.358 - - - 0.856 0.708 - 0.794 - - SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
73. msl2a ENSDARG00000038909 1357 2.355 - - - - - 0.834 0.721 - 0.800 male-specific lethal 2 homolog a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-070912-449]
74. chd4a ENSDARG00000063535, ENSDARG00000111791 4059 2.354 - - - 0.819 - 0.795 0.740 - - chromodomain helicase DNA binding protein 4a [Source:ZFIN;Acc:ZDB-GENE-041111-187]
75. C24H17orf96 C24H17orf96 1538 2.354 - - - 0.777 - - 0.753 - 0.824
76. LMTK3 LMTK3 222 2.351 - - - - - 0.838 0.740 0.773 -
77. clvs2 ENSDARG00000053122 1390 2.35 - - - - - - 0.740 0.827 0.783 clavesin 2 [Source:ZFIN;Acc:ZDB-GENE-041014-313]
78. dpysl3 ENSDARG00000002587 4381 2.347 - - - - - 0.776 0.788 - 0.783 dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
79. rbm25 rbm25 3629 2.341 - 0.748 - - - 0.777 - - 0.816
80. metrn ENSDARG00000030367, ENSDARG00000112407, ENSDARG00000115842 7032 2.338 - - - 0.727 - 0.745 0.866 - - meteorin, glial cell differentiation regulator [Source:ZFIN;Acc:ZDB-GENE-050102-1]
81. PRKAR2B ENSDARG00000036446 812 2.338 - - - - - 0.795 0.831 0.712 - protein kinase cAMP-dependent type II regulatory subunit beta [Source:HGNC Symbol;Acc:HGNC:9392]
82. dpysl4 ENSDARG00000103490 534 2.338 - - - - - - 0.781 0.778 0.779 dihydropyrimidinase-like 4 [Source:ZFIN;Acc:ZDB-GENE-050720-3]
83. celf4 ENSDARG00000070045 1537 2.337 - - - - - 0.806 0.763 0.768 - CUGBP, Elav-like family member 4 [Source:ZFIN;Acc:ZDB-GENE-040718-300]
84. igdcc3 ENSDARG00000075158 1921 2.333 - - - 0.830 - 0.725 - - 0.778 immunoglobulin superfamily, DCC subclass, member 3 [Source:ZFIN;Acc:ZDB-GENE-080303-24]
85. her15.1 ENSDARG00000054560, ENSDARG00000054562 1500 2.332 - - - 0.720 - 0.858 0.754 - - hairy and enhancer of split-related 15, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030707-2]
86. zgc:109889 ENSDARG00000069600, ENSDARG00000113538 554 2.33 - - - - - - 0.801 0.781 0.748 zgc:109889 [Source:ZFIN;Acc:ZDB-GENE-050522-547]
87. magi1a ENSDARG00000070145 547 2.328 - - - - 0.731 0.858 0.739 - - membrane associated guanylate kinase, WW and PDZ domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-081105-13]
88. onecut1 ENSDARG00000007982, ENSDARG00000112251 6307 2.324 - - - 0.705 - 0.808 0.811 - - one cut homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1469]
89. kif15 ENSDARG00000012073 1936 2.318 - 0.794 - 0.727 0.797 - - - - kinesin family member 15 [Source:ZFIN;Acc:ZDB-GENE-050622-16]
90. rtca ENSDARG00000002215 3558 2.308 - - - - - 0.726 0.725 - 0.857 RNA 3'-terminal phosphate cyclase [Source:ZFIN;Acc:ZDB-GENE-030131-9687]
91. pcdh2ac ENSDARG00000099783 325 2.307 - - - - - 0.781 0.826 - 0.700 protocadherin 2 alpha c [Source:ZFIN;Acc:ZDB-GENE-041118-12]
92. lppr3a lppr3a 1294 2.304 - - - - - - 0.803 0.708 0.793
93. TMEM57 TMEM57 260 2.304 - - - - - - 0.730 0.716 0.858
94. myt1a ENSDARG00000074030, ENSDARG00000116035 2839 2.3 - - - - - 0.738 0.837 - 0.725 myelin transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3885]
95. SV2A ENSDARG00000059945 1278 2.299 - - - - - - 0.774 0.782 0.743 synaptic vesicle glycoprotein 2A [Source:ZFIN;Acc:ZDB-GENE-131001-1]
96. cdh7 582 2.298 - - - - 0.705 0.825 0.768 - - cadherin 7, type 2, transcript variant X1
97. CLIP3 ENSDARG00000054456 734 2.297 - - - - - - 0.708 0.851 0.738 CAP-GLY domain containing linker protein 3 [Source:ZFIN;Acc:ZDB-GENE-131127-193]
98. gap43 ENSDARG00000099744 4114 2.295 - - - - - - 0.805 0.707 0.783 growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
99. tgif1 ENSDARG00000059337 4020 2.291 - - - 0.775 - - 0.743 - 0.773 TGFB-induced factor homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030131-475]
100. si:ch211-152f6.6 si:ch211-152f6.6 278 2.291 - - - - - 0.776 0.809 - 0.706

There are 1922 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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