Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for pcdh18a

Gene Name Gene ID Reads Annotation
pcdh18a ENSDARG00000089805 1096 protocadherin 18a [Source:ZFIN;Acc:ZDB-GENE-000607-1]










Genes with expression patterns similar to pcdh18a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pcdh18a ENSDARG00000089805 1096 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 protocadherin 18a [Source:ZFIN;Acc:ZDB-GENE-000607-1]
2. slc1a2b ENSDARG00000102453 3136 3.256 - - - - 0.895 0.708 0.949 - 0.704 solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
3. nova2 ENSDARG00000017673 7685 3.198 - - - - 0.758 0.782 0.911 - 0.747 neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
4. KIF1A KIF1A 1686 2.708 - - - - 0.983 - 0.961 - 0.764
5. CHD6 ENSDARG00000017244 219 2.682 0.888 - - - 0.997 - 0.797 - - chromodomain helicase DNA binding protein 6 [Source:ZFIN;Acc:ZDB-GENE-130530-559]
6. scrt2 ENSDARG00000056175 4331 2.646 - - - - 0.947 0.758 0.941 - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
7. dpysl3 ENSDARG00000002587 4381 2.602 - - - - 0.952 0.752 0.898 - - dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
8. her4.3 ENSDARG00000070770 613 2.525 - - - - 0.997 0.713 0.815 - - hairy-related 4, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-081030-7]
9. neurog1 ENSDARG00000056130 3924 2.491 - - - - - 0.774 0.930 - 0.787 neurogenin 1 [Source:ZFIN;Acc:ZDB-GENE-990415-174]
10. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 2.486 - - - 0.743 - 0.782 0.961 - - cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
11. AKT3 AKT3 1729 2.47 - - - - - 0.706 0.912 - 0.852
12. msi1 ENSDARG00000010710 2634 2.469 - - - - - 0.793 0.895 - 0.781 musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
13. rusc1 ENSDARG00000078125 617 2.463 - - - - - 0.707 0.931 - 0.825 RUN and SH3 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100922-274]
14. hoxc4a ENSDARG00000070338 1382 2.455 - - - - 0.983 0.713 0.759 - - homeobox C4a [Source:ZFIN;Acc:ZDB-GENE-990415-112]
15. ZFHX3 ENSDARG00000103057 7759 2.431 - - - - 0.797 0.747 0.887 - - zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]
16. st8sia2 ENSDARG00000018788 2183 2.424 - - - - - 0.724 0.831 - 0.869 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-020919-4]
17. CABZ01111990.1 CABZ01111990.1 4374 2.422 - - - - - 0.736 0.929 - 0.757
18. rbfox3 rbfox3 1443 2.421 - - - - - 0.725 0.956 - 0.740
19. LMTK3 LMTK3 222 2.421 - - - - - 0.761 0.906 0.754 -
20. myt1b ENSDARG00000102879 5411 2.407 - - - - - 0.775 0.901 - 0.731 myelin transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-090313-67]
21. stmn2a ENSDARG00000033234 2272 2.396 - - - - - 0.731 0.906 - 0.759 stathmin 2a [Source:ZFIN;Acc:ZDB-GENE-041010-85]
22. myt1a ENSDARG00000074030, ENSDARG00000116035 2839 2.396 - - - - - 0.741 0.948 - 0.707 myelin transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3885]
23. csdc2a ENSDARG00000041323, ENSDARG00000115932 490 2.389 - - - - - 0.789 0.887 0.713 - cold shock domain containing C2, RNA binding a [Source:ZFIN;Acc:ZDB-GENE-040718-442]
24. her4.1 ENSDARG00000056732 1264 2.371 - - - - - 0.742 0.841 - 0.788 hairy-related 4, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-980526-521]
25. plp1a ENSDARG00000103732 3544 2.369 - - - - - 0.754 0.893 - 0.722 proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
26. rimkla ENSDARG00000016830, ENSDARG00000112193 4111 2.362 - - - - - 0.762 0.759 - 0.841 ribosomal modification protein rimK-like family member A [Source:ZFIN;Acc:ZDB-GENE-040912-20]
27. nkx6.2 ENSDARG00000104735 5081 2.362 - - 0.714 - 0.708 - 0.940 - - NK6 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-070626-1]
28. ptprsb 1085 2.359 - - - - - 0.820 0.726 - 0.813 protein tyrosine phosphatase, receptor type, s, b
29. scrt1b ENSDARG00000040214, ENSDARG00000110984 533 2.356 0.722 - - - - - 0.918 0.716 - scratch family zinc finger 1b [Source:ZFIN;Acc:ZDB-GENE-050327-72]
30. CHL1 CHL1 1553 2.355 - - - - - 0.702 0.938 - 0.715
31. ctbp1 ENSDARG00000057007, ENSDARG00000115804 5795 2.342 - - - - - 0.800 0.802 - 0.740 C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]
32. ADAM22 ENSDARG00000060532 2259 2.336 - - - - - - 0.890 0.701 0.745 ADAM metallopeptidase domain 22 [Source:ZFIN;Acc:ZDB-GENE-070810-1]
33. jph3 ENSDARG00000102204 175 2.335 - - - - - 0.774 0.729 - 0.832 junctophilin 3 [Source:ZFIN;Acc:ZDB-GENE-060503-415]
34. pou3f2b ENSDARG00000076262, ENSDARG00000112713 2439 2.32 - - - - - 0.715 0.821 - 0.784 POU class 3 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-370]
35. si:dkey-25e11.10 si:dkey-25e11.10 955 2.309 0.730 - - - - 0.802 0.777 - -
36. myo16 ENSDARG00000078582 714 2.308 - 0.725 - - - 0.771 0.812 - - myosin XVI [Source:ZFIN;Acc:ZDB-GENE-070912-470]
37. C25H15orf27 C25H15orf27 69 2.294 0.795 - - - - 0.708 0.791 - -
38. cdkn2d ENSDARG00000094176 190 2.283 0.741 - - - - 0.721 0.821 - - cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4) [Source:ZFIN;Acc:ZDB-GENE-110316-1]
39. si:ch211-288g17.3 ENSDARG00000070959 2425 2.279 - - - - - 0.782 0.722 - 0.775 si:ch211-288g17.3 [Source:ZFIN;Acc:ZDB-GENE-030131-461]
40. hoxb8b ENSDARG00000054025, ENSDARG00000111056 2106 2.267 - 0.701 - - - 0.791 0.775 - - homeobox B8b [Source:ZFIN;Acc:ZDB-GENE-980526-291]
41. nrxn3b ENSDARG00000062693 192 2.264 - - - - - 0.721 0.742 - 0.801 neurexin 3b [Source:ZFIN;Acc:ZDB-GENE-070206-10]
42. cldn5a ENSDARG00000043716 3865 2.219 0.702 - - - - 0.709 0.808 - - claudin 5a [Source:ZFIN;Acc:ZDB-GENE-040426-2442]
43. cd99l2 ENSDARG00000056722 5036 2.216 - - - - - 0.742 0.708 - 0.766 CD99 molecule-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1986]
44. lhx1b ENSDARG00000007944, ENSDARG00000111635 254 2.2 0.730 - - - - 0.711 0.759 - - LIM homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-980526-116]
45. coe2 coe2 1633 2.123 - - - - - 0.708 0.702 0.713 -
46. gnao1a ENSDARG00000016676 8184 1.909 - - - - 0.990 - 0.919 - - guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, a [Source:ZFIN;Acc:ZDB-GENE-040426-1757]
47. hpca ENSDARG00000018397, ENSDARG00000110115 3866 1.907 - - - - 0.986 - 0.921 - - hippocalcin [Source:ZFIN;Acc:ZDB-GENE-040426-1683]
48. ctnnd2b ENSDARG00000003779 964 1.886 - - - - 0.989 - 0.897 - - catenin (cadherin-associated protein), delta 2b [Source:ZFIN;Acc:ZDB-GENE-070912-532]
49. mier1a ENSDARG00000041072 1690 1.86 - - - - 0.969 - - - 0.891 mesoderm induction early response 1a, transcriptional regulator [Source:ZFIN;Acc:ZDB-GENE-030131-409]
50. dla ENSDARG00000010791 9281 1.847 - - - - 0.924 - 0.923 - - deltaA [Source:ZFIN;Acc:ZDB-GENE-980526-29]
51. wfikkn2a ENSDARG00000013460 859 1.831 - - - - 0.998 0.833 - - - info WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-120914-1]
52. si:dkey-19e4.5 ENSDARG00000089886 2562 1.829 - - - - 0.988 - - - 0.841 si:dkey-19e4.5 [Source:ZFIN;Acc:ZDB-GENE-030131-1852]
53. nol8 ENSDARG00000044143 425 1.823 - - - - 0.998 - - - 0.825 nucleolar protein 8 [Source:ZFIN;Acc:ZDB-GENE-050208-491]
54. eya3 ENSDARG00000036100 1965 1.822 - - - - 0.954 - - - 0.868 EYA transcriptional coactivator and phosphatase 3 [Source:ZFIN;Acc:ZDB-GENE-060503-864]
55. cdan1 ENSDARG00000042261 658 1.819 - - - - 0.997 - - - 0.822 codanin 1 [Source:ZFIN;Acc:ZDB-GENE-110411-280]
56. tpcn1 ENSDARG00000062362 563 1.804 - - - - 0.997 - - - 0.807 two pore segment channel 1 [Source:ZFIN;Acc:ZDB-GENE-060526-199]
57. gas5 279 1.792 - - - - 0.995 - 0.797 - - growth arrest-specific 5, transcript variant X4
58. ikbkb ENSDARG00000079123 498 1.791 - - - - 0.996 - - - 0.795 inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta [Source:ZFIN;Acc:ZDB-GENE-071115-2]
59. lysmd2 ENSDARG00000091771, ENSDARG00000112692 1102 1.789 - - - - 0.987 - 0.802 - - LysM, putative peptidoglycan-binding, domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040801-250]
60. atp6v0cb ENSDARG00000036577 3472 1.788 - - - - - 0.861 0.927 - - ATPase H+ transporting V0 subunit cb [Source:ZFIN;Acc:ZDB-GENE-030131-4127]
61. mcrs1 ENSDARG00000020840 3232 1.785 - - - - 0.960 - - - 0.825 microspherule protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2434]
62. sh3bp5lb 1090 1.781 - - - - 0.995 0.786 - - - SH3-binding domain protein 5-like, b
63. aatkb ENSDARG00000104442 392 1.779 - - - - 0.999 - 0.780 - - apoptosis-associated tyrosine kinase b [Source:ZFIN;Acc:ZDB-GENE-100812-6]
64. pax6a ENSDARG00000103379 3061 1.764 - - - - - 0.813 0.951 - - paired box 6a [Source:ZFIN;Acc:ZDB-GENE-990415-200]
65. phactr3a ENSDARG00000058243 150 1.761 0.820 - - - - - 0.941 - - phosphatase and actin regulator 3a [Source:ZFIN;Acc:ZDB-GENE-080220-4]
66. nrn1a ENSDARG00000071860 1311 1.76 - - - - - - 0.909 - 0.851 neuritin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-212]
67. dacha ENSDARG00000010132 648 1.753 0.907 - - - - - 0.846 - - dachshund a [Source:ZFIN;Acc:ZDB-GENE-020402-3]
68. si:ch211-282k23.2 ENSDARG00000093591 447 1.751 - - - - 0.997 - 0.754 - - si:ch211-282k23.2 [Source:ZFIN;Acc:ZDB-GENE-050420-314]
69. cntn4 ENSDARG00000098161, ENSDARG00000109387 437 1.751 - - - - - 0.831 0.920 - - contactin 4 [Source:ZFIN;Acc:ZDB-GENE-060929-776]
70. adam11 ENSDARG00000079204 298 1.75 - - - - - 0.780 0.970 - - ADAM metallopeptidase domain 11 [Source:ZFIN;Acc:ZDB-GENE-070808-3]
71. rac3a ENSDARG00000090062 394 1.749 - - - - - - 0.929 - 0.820 Rac family small GTPase 3a [Source:ZFIN;Acc:ZDB-GENE-040718-256]
72. INA INA 950 1.747 - - - - - 0.811 0.936 - -
73. dbx1a ENSDARG00000086393 3161 1.747 - - - - - 0.855 0.892 - - developing brain homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-000128-8]
74. thsd7ba ENSDARG00000095022 231 1.744 - - - - - - 0.913 - 0.831 thrombospondin, type I, domain containing 7Ba [Source:ZFIN;Acc:ZDB-GENE-070621-2]
75. nova1 ENSDARG00000020178 4129 1.742 - - - - - 0.796 0.946 - - neuro-oncological ventral antigen 1 [Source:ZFIN;Acc:ZDB-GENE-060526-113]
76. tmie ENSDARG00000069423 305 1.742 - - - - - 0.791 0.951 - - transmembrane inner ear [Source:ZFIN;Acc:ZDB-GENE-061207-9]
77. her2 ENSDARG00000038205 3219 1.738 - - - - - 0.816 0.922 - - hairy-related 2 [Source:ZFIN;Acc:ZDB-GENE-980526-274]
78. SNAP91 ENSDARG00000098809 556 1.738 - - - - - - 0.926 - 0.812 synaptosomal-associated protein 91 [Source:ZFIN;Acc:ZDB-GENE-100422-6]
79. ranbp9 ENSDARG00000061048 2687 1.737 - - - - 0.968 - - - 0.769 RAN binding protein 9 [Source:ZFIN;Acc:ZDB-GENE-021030-5]
80. rybpa ENSDARG00000037773 904 1.734 - - - - 0.995 - 0.739 - - RING1 and YY1 binding protein a [Source:ZFIN;Acc:ZDB-GENE-030424-3]
81. FRMPD3 ENSDARG00000074865, ENSDARG00000109705 276 1.733 - - - - - - 0.958 - 0.775 FERM and PDZ domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-100316-9]
82. syt12 ENSDARG00000101776 215 1.732 - - - - - 0.811 0.921 - - synaptotagmin XII [Source:ZFIN;Acc:ZDB-GENE-081022-147]
83. arfip1 ENSDARG00000070055, ENSDARG00000116473 3113 1.732 - - - - 0.949 - - - 0.783 ADP-ribosylation factor interacting protein 1 (arfaptin 1) [Source:ZFIN;Acc:ZDB-GENE-040426-2690]
84. nell2b ENSDARG00000062797 854 1.731 - - - - - 0.796 0.935 - - neural EGFL like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-8026]
85. slc17a6b ENSDARG00000041150 823 1.73 - - - - - 0.805 0.925 - - solute carrier family 17 (vesicular glutamate transporter), member 6b [Source:ZFIN;Acc:ZDB-GENE-030616-554]
86. grin1a ENSDARG00000027828 1327 1.729 - - - - - 0.798 0.931 - - glutamate receptor, ionotropic, N-methyl D-aspartate 1a [Source:ZFIN;Acc:ZDB-GENE-051202-1]
87. samm50l ENSDARG00000039681 2465 1.728 - - - - 0.963 - - - 0.765 sorting and assembly machinery component 50 homolog, like [Source:ZFIN;Acc:ZDB-GENE-041114-30]
88. irx1b ENSDARG00000056594 2224 1.727 - - - - - - 0.903 - 0.824 iroquois homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-010716-1]
89. zgc:161969 ENSDARG00000041359 898 1.727 - 0.751 - - 0.976 - - - - zgc:161969 [Source:ZFIN;Acc:ZDB-GENE-030131-2597]
90. olfm1b ENSDARG00000014053 1392 1.726 - - - - - 0.777 0.949 - - olfactomedin 1b [Source:ZFIN;Acc:ZDB-GENE-040801-228]
91. slc18a3a ENSDARG00000006356 1285 1.725 - - - - - 0.808 0.917 - - solute carrier family 18 (vesicular acetylcholine transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-060929-990]
92. neflb ENSDARG00000012426 298 1.722 - - - - - 0.828 0.894 - - neurofilament, light polypeptide b [Source:ZFIN;Acc:ZDB-GENE-060312-44]
93. chat chat 463 1.722 - - - - - 0.789 0.933 - -
94. lhfpl4a ENSDARG00000111810 206 1.722 0.766 - - - - - 0.956 - - lipoma HMGIC fusion partner-like 4a [Source:ZFIN;Acc:ZDB-GENE-111017-1]
95. gfap ENSDARG00000025301 5584 1.72 - - - - - 0.791 0.929 - - glial fibrillary acidic protein [Source:ZFIN;Acc:ZDB-GENE-990914-3]
96. cnn3b ENSDARG00000029856 4807 1.72 - - - - 0.968 - - 0.752 - calponin 3, acidic b [Source:ZFIN;Acc:ZDB-GENE-050522-263]
97. gpr186 ENSDARG00000094860 53 1.719 - - - - - 0.779 0.940 - - G protein-coupled receptor 186 [Source:ZFIN;Acc:ZDB-GENE-060503-489]
98. MAP1A MAP1A 847 1.719 - - - - - 0.821 0.898 - -
99. mex3b ENSDARG00000058369 1867 1.719 - - - - - - 0.855 - 0.864 mex-3 RNA binding family member B [Source:ZFIN;Acc:ZDB-GENE-030131-2628]
100. EPB41L1 EPB41L1 1896 1.716 - - - - - 0.790 0.926 - -

There are 2331 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA