Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for pcdh15a

Gene Name Gene ID Reads Annotation
pcdh15a ENSDARG00000098257 103 protocadherin-related 15a [Source:ZFIN;Acc:ZDB-GENE-030616-3]










Genes with expression patterns similar to pcdh15a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pcdh15a ENSDARG00000098257 103 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 protocadherin-related 15a [Source:ZFIN;Acc:ZDB-GENE-030616-3]
2. U1_50 U1_50 62 1.728 - 0.859 - - - - 0.869 - -
3. slc17a9b ENSDARG00000011049 231 1.596 - - - - - 0.799 0.797 - - solute carrier family 17 (vesicular nucleotide transporter), member 9b [Source:ZFIN;Acc:ZDB-GENE-040718-380]
4. trpv4 ENSDARG00000061941 297 1.574 - 0.772 - - - 0.802 - - - transient receptor potential cation channel, subfamily V, member 4 [Source:ZFIN;Acc:ZDB-GENE-030912-7]
5. rhogb ENSDARG00000004301 358 1.567 - - - - - 0.833 0.734 - - ras homolog family member Gb [Source:ZFIN;Acc:ZDB-GENE-030131-8877]
6. dhx57 ENSDARG00000057660 390 1.563 - 0.734 - - - - 0.829 - - DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57 [Source:ZFIN;Acc:ZDB-GENE-030131-4078]
7. chst13 chst13 669 1.555 - 0.786 - - - - 0.769 - -
8. zgc:136895 zgc:136895 41 1.546 - 0.754 - - - 0.792 - - -
9. si:ch73-362m14.2 ENSDARG00000090164 47 1.544 - 0.834 - - - 0.710 - - - si:ch73-362m14.2 [Source:ZFIN;Acc:ZDB-GENE-120215-235]
10. rangrf ENSDARG00000098786 375 1.542 - 0.773 - - - - 0.769 - - RAN guanine nucleotide release factor [Source:ZFIN;Acc:ZDB-GENE-060526-143]
11. BX004880.2 BX004880.2 83 1.539 - 0.727 - - - - 0.812 - -
12. NRTN ENSDARG00000079849 77 1.531 - 0.739 - - - - 0.792 - - neurturin [Source:ZFIN;Acc:ZDB-GENE-100427-6]
13. cx40.8 ENSDARG00000071192 105 1.517 0.738 - - - - 0.779 - - - connexin 40.8 [Source:ZFIN;Acc:ZDB-GENE-050616-10]
14. kcnk10a ENSDARG00000062849 28 1.516 - 0.718 - - - 0.798 - - - potassium channel, subfamily K, member 10a [Source:ZFIN;Acc:ZDB-GENE-041210-291]
15. rln1 ENSDARG00000103762 8 1.499 - - - - - 0.748 0.751 - - relaxin 1 [Source:ZFIN;Acc:ZDB-GENE-120215-201]
16. CABZ01085657.1 CABZ01085657.1 23 1.493 0.758 0.735 - - - - - - -
17. map1lc3c ENSDARG00000100528 31 1.484 - - - - - 0.732 0.752 - - microtubule-associated protein 1 light chain 3 gamma [Source:ZFIN;Acc:ZDB-GENE-040426-1080]
18. si:dkey-10o6.2 ENSDARG00000074628 22 1.465 - 0.717 - - - 0.748 - - - si:dkey-10o6.2 [Source:ZFIN;Acc:ZDB-GENE-070705-284]
19. il11b ENSDARG00000058557 17 1.465 - 0.717 - - - 0.748 - - - interleukin 11b [Source:ZFIN;Acc:ZDB-GENE-051019-2]
20. CDC42EP1 CDC42EP1 50 1.46 - 0.719 - - - - - 0.741 -
21. cpdb ENSDARG00000053877 5 1.455 - - - - - 0.709 - 0.746 - carboxypeptidase D, b [Source:ZFIN;Acc:ZDB-GENE-060929-1270]
22. lypd6 ENSDARG00000004307 233 1.425 - 0.719 - - - - 0.706 - - LY6/PLAUR domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-040912-117]
23. zgc:174651 zgc:174651 90 0.959 - 0.959 - - - - - - -
24. C2H5orf22 C2H5orf22 196 0.953 - 0.953 - - - - - - -
25. arhgap29b ENSDARG00000017748 812 0.923 - 0.923 - - - - - - - Rho GTPase activating protein 29b [Source:ZFIN;Acc:ZDB-GENE-031010-44]
26. idua ENSDARG00000062904 105 0.921 - - - - - - 0.921 - - iduronidase, alpha-L- [Source:ZFIN;Acc:ZDB-GENE-060526-29]
27. dnajc6 ENSDARG00000079891 438 0.908 - 0.908 - - - - - - - DnaJ (Hsp40) homolog, subfamily C, member 6 [Source:ZFIN;Acc:ZDB-GENE-080104-2]
28. ada ENSDARG00000003113 228 0.904 - - - - - - 0.904 - - adenosine deaminase [Source:ZFIN;Acc:ZDB-GENE-040718-393]
29. TATDN3 ENSDARG00000044072 914 0.896 - 0.896 - - - - - - - TatD DNase domain containing 3 [Source:HGNC Symbol;Acc:HGNC:27010]
30. znf277 ENSDARG00000025346, ENSDARG00000113592 288 0.894 - - - - - - 0.894 - - zinc finger protein 277 [Source:ZFIN;Acc:ZDB-GENE-040426-1633]
31. RFX7 885 0.893 - 0.893 - - - - - - - regulatory factor X, 7
32. nexmifb ENSDARG00000029296 416 0.887 - 0.887 - - - - - - - neurite extension and migration factor b [Source:ZFIN;Acc:ZDB-GENE-140106-18]
33. ypel3 ENSDARG00000055510 1344 0.882 - - - - - - 0.882 - - yippee-like 3 [Source:ZFIN;Acc:ZDB-GENE-030516-4]
34. si:dkey-19n13.5 si:dkey-19n13.5 36 0.881 - 0.881 - - - - - - -
35. samd1b ENSDARG00000079062 280 0.88 - - - - - - 0.880 - - sterile alpha motif domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-090313-2]
36. HEG1 ENSDARG00000018441 117 0.877 - - - - - - 0.877 - - heart development protein with EGF-like domains 1 [Source:ZFIN;Acc:ZDB-GENE-040714-1]
37. zgc:152863 ENSDARG00000099969 99 0.877 - 0.877 - - - - - - - zgc:152863 [Source:ZFIN;Acc:ZDB-GENE-061103-463]
38. srcap ENSDARG00000005236 1740 0.877 - 0.877 - - - - - - - Snf2-related CREBBP activator protein [Source:ZFIN;Acc:ZDB-GENE-041008-127]
39. ATP5SL ATP5SL 130 0.873 - 0.873 - - - - - - -
40. pir ENSDARG00000056638 722 0.872 - 0.872 - - - - - - - pirin [Source:ZFIN;Acc:ZDB-GENE-040718-288]
41. creg1 ENSDARG00000105154 843 0.87 - - - - - - 0.870 - - cellular repressor of E1A-stimulated genes 1 [Source:ZFIN;Acc:ZDB-GENE-070112-2042]
42. dpf2 ENSDARG00000012219 666 0.869 - - - - - 0.869 - - - D4, zinc and double PHD fingers family 2 [Source:ZFIN;Acc:ZDB-GENE-041024-2]
43. CU570983.1 CU570983.1 83 0.867 - - - - - 0.867 - - -
44. si:dkey-273g18.1 ENSDARG00000097405, ENSDARG00000105439 64 0.865 - 0.865 - - - - - - - si:dkey-273g18.1 [Source:ZFIN;Acc:ZDB-GENE-060503-256]
45. tek ENSDARG00000028663 167 0.863 - 0.863 - - - - - - - TEK tyrosine kinase, endothelial [Source:ZFIN;Acc:ZDB-GENE-990415-56]
46. tnfaip3 ENSDARG00000027777 1066 0.862 - - - - - - 0.862 - - tumor necrosis factor, alpha-induced protein 3 [Source:ZFIN;Acc:ZDB-GENE-100212-2]
47. rps6kal ENSDARG00000037574, ENSDARG00000115099 294 0.861 - 0.861 - - - - - - - ribosomal protein S6 kinase a, like [Source:ZFIN;Acc:ZDB-GENE-030131-9616]
48. arhgef28 ENSDARG00000060415 142 0.86 0.860 - - - - - - - - Rho guanine nucleotide exchange factor (GEF) 28 [Source:ZFIN;Acc:ZDB-GENE-060531-28]
49. C4H12orf5 C4H12orf5 158 0.86 - 0.860 - - - - - - -
50. stambpl1 ENSDARG00000003085 665 0.859 - - - - - - 0.859 - - STAM binding protein-like 1 [Source:ZFIN;Acc:ZDB-GENE-100215-4]
51. anxa13l ENSDARG00000013613 631 0.859 - 0.859 - - - - - - - annexin A13, like [Source:ZFIN;Acc:ZDB-GENE-050522-310]
52. kcnk13a ENSDARG00000008212 136 0.858 - - - - - - 0.858 - - potassium channel, subfamily K, member 13a [Source:ZFIN;Acc:ZDB-GENE-080219-46]
53. pex11a ENSDARG00000060707, ENSDARG00000111994 101 0.858 - - - - - - 0.858 - - peroxisomal biogenesis factor 11 alpha [Source:ZFIN;Acc:ZDB-GENE-050419-121]
54. zgc:152753 ENSDARG00000056443 140 0.854 - 0.854 - - - - - - - zgc:152753 [Source:ZFIN;Acc:ZDB-GENE-060818-8]
55. zgc:194469 ENSDARG00000104367 93 0.854 - - - - - 0.854 - - - zgc:194469 [Source:ZFIN;Acc:ZDB-GENE-081022-114]
56. ZNF609 ZNF609 2176 0.852 - 0.852 - - - - - - -
57. mta2 ENSDARG00000013031 2932 0.852 - 0.852 - - - - - - - metastasis associated 1 family, member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4803]
58. CITED1 ENSDARG00000077769 692 0.851 - 0.851 - - - - - - - Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5596]
59. tmem194a tmem194a 745 0.851 - - - - - - 0.851 - -
60. sqlea ENSDARG00000079946 145 0.851 - - - - - 0.851 - - - squalene epoxidase a [Source:ZFIN;Acc:ZDB-GENE-071004-98]
61. si:dkey-93m18.3 ENSDARG00000092664 30 0.85 - - - - - - 0.850 - - si:dkey-93m18.3 [Source:ZFIN;Acc:ZDB-GENE-091204-346]
62. C17H14orf1 C17H14orf1 256 0.85 - 0.850 - - - - - - -
63. cmtm3 ENSDARG00000008811, ENSDARG00000115417 502 0.849 - 0.849 - - - - - - - CKLF-like MARVEL transmembrane domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040801-206]
64. C11H1orf158 C11H1orf158 133 0.848 - 0.848 - - - - - - -
65. fzd5 ENSDARG00000025420 1082 0.848 - 0.848 - - - - - - - frizzled class receptor 5 [Source:ZFIN;Acc:ZDB-GENE-990415-218]
66. FP236168.1 FP236168.1 150 0.847 - - - - - 0.847 - - -
67. fam155b ENSDARG00000060152, ENSDARG00000114398 221 0.847 - 0.847 - - - - - - - family with sequence similarity 155, member B [Source:ZFIN;Acc:ZDB-GENE-060526-303]
68. SBK1 SBK1 154 0.846 - 0.846 - - - - - - -
69. tprb ENSDARG00000016630 274 0.846 - - - - - - 0.846 - - translocated promoter region b, nuclear basket protein [Source:ZFIN;Acc:ZDB-GENE-030131-6410]
70. ccr12.3 ccr12.3 79 0.845 - - - - - - 0.845 - -
71. tut1 ENSDARG00000057321 301 0.843 - - - - - - 0.843 - - terminal uridylyl transferase 1, U6 snRNA-specific [Source:ZFIN;Acc:ZDB-GENE-050706-68]
72. PPP1R16B ENSDARG00000079860 390 0.843 - 0.843 - - - - - - - protein phosphatase 1, regulatory subunit 16B [Source:ZFIN;Acc:ZDB-GENE-131127-294]
73. BX571880.1 ENSDARG00000097533 499 0.842 - 0.842 - - - - - - -
74. SHPRH ENSDARG00000075884 382 0.842 - 0.842 - - - - - - - SNF2 histone linker PHD RING helicase [Source:ZFIN;Acc:ZDB-GENE-110512-2]
75. BX530409.1 BX530409.1 65 0.842 - 0.842 - - - - - - -
76. slc46a1 ENSDARG00000026149 297 0.842 - 0.842 - - - - - - - solute carrier family 46 (folate transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1012]
77. TEP1 ENSDARG00000038713 289 0.841 - - - - - 0.841 - - - telomerase-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6153]
78. si:dkey-30c15.12 ENSDARG00000058546 12 0.841 - - - - - 0.841 - - - si:dkey-30c15.12 [Source:ZFIN;Acc:ZDB-GENE-060503-920]
79. use1 ENSDARG00000007250 824 0.841 - 0.841 - - - - - - - unconventional SNARE in the ER 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1015]
80. CU633988.1 CU633988.1 97 0.839 - - - - - 0.839 - - -
81. socs3b ENSDARG00000026611 262 0.839 - 0.839 - - - - - - - suppressor of cytokine signaling 3b [Source:ZFIN;Acc:ZDB-GENE-040426-2528]
82. ZNF710 ZNF710 766 0.838 - 0.838 - - - - - - -
83. heg heg 559 0.838 - 0.838 - - - - - - -
84. bcl7ba ENSDARG00000111877 3696 0.836 - - - - - - 0.836 - - BCL tumor suppressor 7Ba [Source:ZFIN;Acc:ZDB-GENE-040426-2193]
85. pigx ENSDARG00000063559 285 0.836 - - - - - - 0.836 - - phosphatidylinositol glycan anchor biosynthesis, class X [Source:ZFIN;Acc:ZDB-GENE-070705-212]
86. nek1 ENSDARG00000022350 158 0.836 - - - - - - 0.836 - - NIMA-related kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040730-1]
87. RECQL4 ENSDARG00000077516 462 0.836 - 0.836 - - - - - - - RecQ helicase-like 4 [Source:ZFIN;Acc:ZDB-GENE-091112-2]
88. Metazoa_SRP_8 Metazoa_SRP_8 153 0.835 - 0.835 - - - - - - -
89. hexa ENSDARG00000052113, ENSDARG00000111134 228 0.833 - - - - - - 0.833 - - hexosaminidase A (alpha polypeptide) [Source:ZFIN;Acc:ZDB-GENE-050417-283]
90. si:dkeyp-72e1.7 ENSDARG00000104457 169 0.833 - - - - - - 0.833 - - si:dkeyp-72e1.7 [Source:ZFIN;Acc:ZDB-GENE-120215-229]
91. si:dkey-6f10.3 ENSDARG00000093660 116 0.832 - - - - - - 0.832 - - si:dkey-6f10.3 [Source:ZFIN;Acc:ZDB-GENE-041210-339]
92. hspb6 ENSDARG00000077236 209 0.831 - 0.831 - - - - - - - heat shock protein, alpha-crystallin-related, b6 [Source:ZFIN;Acc:ZDB-GENE-080214-7]
93. ppa2 ENSDARG00000009685 209 0.83 - 0.830 - - - - - - - pyrophosphatase (inorganic) 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1857]
94. lrp8 ENSDARG00000070074, ENSDARG00000116879 323 0.83 - 0.830 - - - - - - - low density lipoprotein receptor-related protein 8, apolipoprotein e receptor [Source:ZFIN;Acc:ZDB-GENE-050506-134]
95. tefm ENSDARG00000100548, ENSDARG00000114690, ENSDARG00000114872 140 0.83 - 0.830 - - - - - - - transcription elongation factor, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-060825-345]
96. PAXBP1 ENSDARG00000062361 626 0.83 - - - - - - 0.830 - - PAX3 and PAX7 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:13579]
97. vps39 ENSDARG00000074471 684 0.83 - - - - - - 0.830 - - vacuolar protein sorting 39 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-080530-2]
98. si:dkeyp-33b5.4 ENSDARG00000075057 185 0.829 - 0.829 - - - - - - - si:dkeyp-33b5.4 [Source:ZFIN;Acc:ZDB-GENE-100618-4]
99. CR932000.1 ENSDARG00000097733 40 0.828 - - - - - 0.828 - - -
100. slc35d1b ENSDARG00000027986 138 0.827 - 0.827 - - - - - - - solute carrier family 35 (UDP-GlcA/UDP-GalNAc transporter), member D1b [Source:ZFIN;Acc:ZDB-GENE-040426-1213]

There are 707 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA