Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for pccb

Gene Name Gene ID Reads Annotation
pccb ENSDARG00000038910 1017 propionyl-CoA carboxylase subunit beta [Source:ZFIN;Acc:ZDB-GENE-040426-2467]










Genes with expression patterns similar to pccb

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pccb ENSDARG00000038910 1017 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 propionyl-CoA carboxylase subunit beta [Source:ZFIN;Acc:ZDB-GENE-040426-2467]
2. ift27 ENSDARG00000099279 393 1.559 - - - - 0.811 0.748 - - - intraflagellar transport 27 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-041212-9]
3. tfeb ENSDARG00000010794 473 1.534 - - - - - 0.832 0.702 - - transcription factor EB [Source:ZFIN;Acc:ZDB-GENE-090807-3]
4. TMEM179B ENSDARG00000069495 1074 1.528 - - - - - 0.818 0.710 - - transmembrane protein 179B [Source:ZFIN;Acc:ZDB-GENE-091204-145]
5. mpv17 ENSDARG00000032431 1225 1.513 - - - - 0.721 0.792 - - - MpV17 mitochondrial inner membrane protein [Source:ZFIN;Acc:ZDB-GENE-040426-1168]
6. nt5dc2 ENSDARG00000059646 3878 1.489 - - - - - 0.728 0.761 - - 5'-nucleotidase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060810-17]
7. dap1b ENSDARG00000086842, ENSDARG00000109678 2464 1.481 - - - - - 0.725 0.756 - - death associated protein 1b [Source:ZFIN;Acc:ZDB-GENE-000511-4]
8. suz12a ENSDARG00000070256 2229 1.48 - - - - 0.777 - 0.703 - - SUZ12, polycomb repressive complex 2 subunit a [Source:ZFIN;Acc:ZDB-GENE-040801-36]
9. fip1l1b ENSDARG00000070431 1677 1.469 - - - - - 0.761 0.708 - - FIP1 like 1b (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-041010-138]
10. spryd4 ENSDARG00000023309, ENSDARG00000114062 2091 1.444 - 0.738 - - - - 0.706 - - SPRY domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-040718-180]
11. orc5 ENSDARG00000021579 536 1.442 - - - - 0.730 0.712 - - - origin recognition complex, subunit 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2275]
12. NFATC3 NFATC3 1712 1.409 - 0.703 - - - - 0.706 - -
13. nr5a2 ENSDARG00000100940 1488 0.884 - - - - - 0.884 - - - nuclear receptor subfamily 5, group A, member 2 [Source:ZFIN;Acc:ZDB-GENE-990415-79]
14. foxf1 ENSDARG00000015399 205 0.882 - - - - - 0.882 - - - forkhead box F1 [Source:ZFIN;Acc:ZDB-GENE-050419-153]
15. ids ENSDARG00000071699 265 0.881 - - - - - 0.881 - - - iduronate 2-sulfatase [Source:ZFIN;Acc:ZDB-GENE-061215-37]
16. f9b ENSDARG00000029493, ENSDARG00000111567 119 0.878 - - - - - 0.878 - - - coagulation factor IXb [Source:ZFIN;Acc:ZDB-GENE-060421-7346]
17. mkrn2 ENSDARG00000007630 127 0.866 - - - - 0.866 - - - - makorin, ring finger protein, 2 [Source:ZFIN;Acc:ZDB-GENE-020213-2]
18. nlgn3b ENSDARG00000062376 171 0.863 - - - - 0.863 - - - - neuroligin 3b [Source:ZFIN;Acc:ZDB-GENE-060526-197]
19. nkiras1 ENSDARG00000099527 277 0.862 - - - - - 0.862 - - - NFKB inhibitor interacting Ras-like 1 [Source:ZFIN;Acc:ZDB-GENE-040718-215]
20. plekho1a ENSDARG00000061191 98 0.862 - - - - 0.862 - - - - pleckstrin homology domain containing, family O member 1a [Source:ZFIN;Acc:ZDB-GENE-060503-433]
21. si:dkey-102m7.3 ENSDARG00000100366 27 0.861 - - - - 0.861 - - - - si:dkey-102m7.3 [Source:ZFIN;Acc:ZDB-GENE-091204-389]
22. si:ch211-110p13.9 ENSDARG00000093821 82 0.86 - - - - 0.860 - - - - si:ch211-110p13.9 [Source:ZFIN;Acc:ZDB-GENE-060526-9]
23. arpc5la ENSDARG00000041720 143 0.859 - - - - 0.859 - - - - actin related protein 2/3 complex, subunit 5-like, a [Source:ZFIN;Acc:ZDB-GENE-040426-1453]
24. prom2 ENSDARG00000039406 278 0.858 - - - - - 0.858 - - - prominin 2 [Source:ZFIN;Acc:ZDB-GENE-080723-16]
25. arv1 ENSDARG00000074757 227 0.856 - - - - 0.856 - - - - ARV1 homolog, fatty acid homeostasis modulator [Source:ZFIN;Acc:ZDB-GENE-080204-35]
26. eif2b4 ENSDARG00000014004 2213 0.856 - 0.856 - - - - - - - eukaryotic translation initiation factor 2B, subunit 4 delta [Source:ZFIN;Acc:ZDB-GENE-030131-955]
27. mir457b 21 0.855 - - - - 0.855 - - - - microRNA 457b
28. rapgef5a ENSDARG00000075271 282 0.854 - - - - 0.854 - - - - Rap guanine nucleotide exchange factor (GEF) 5a [Source:ZFIN;Acc:ZDB-GENE-030131-7681]
29. zgc:158852 ENSDARG00000102076 65 0.854 - - - - 0.854 - - - - zgc:158852 [Source:ZFIN;Acc:ZDB-GENE-070112-972]
30. GTPBP6 ENSDARG00000061091 29 0.852 - - - - 0.852 - - - - GTP binding protein 6 (putative) [Source:ZFIN;Acc:ZDB-GENE-031118-62]
31. gpr88 24 0.852 - - - - 0.852 - - - - G protein-coupled receptor 88
32. shank2 ENSDARG00000062325 66 0.851 - - - - 0.851 - - - - SH3 and multiple ankyrin repeat domains 2 [Source:ZFIN;Acc:ZDB-GENE-061207-58]
33. KHDRBS3 ENSDARG00000101020 408 0.85 - - - - 0.850 - - - - KH RNA binding domain containing, signal transduction associated 3 [Source:HGNC Symbol;Acc:HGNC:18117]
34. CU694256.1 ENSDARG00000097007 290 0.85 - - - - 0.850 - - - -
35. MAP4K2 ENSDARG00000001234 39 0.85 - - - - 0.850 - - - - mitogen-activated protein kinase kinase kinase kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030616-163]
36. pax6l pax6l 54 0.849 - - - - 0.849 - - - -
37. arf4a ENSDARG00000045989, ENSDARG00000103858 2545 0.849 - - - - - - 0.849 - - ADP-ribosylation factor 4a [Source:ZFIN;Acc:ZDB-GENE-040801-109]
38. wfikkn2b ENSDARG00000059139 45 0.848 - - - - 0.848 - - - - WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-110414-1]
39. ddx26b 79 0.848 - - - - 0.848 - - - - DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B, transcript variant X1
40. slc16a6a ENSDARG00000102793 60 0.847 - - - - 0.847 - - - - solute carrier family 16, member 6a [Source:ZFIN;Acc:ZDB-GENE-110208-1]
41. DTX3 DTX3 303 0.846 - - - - 0.846 - - - -
42. stoml1 ENSDARG00000062142, ENSDARG00000110862 113 0.846 - - - - 0.846 - - - - stomatin (EPB72)-like 1 [Source:ZFIN;Acc:ZDB-GENE-070209-241]
43. snrpa ENSDARG00000018890 4593 0.845 - 0.845 - - - - - - - small nuclear ribonucleoprotein polypeptide A [Source:ZFIN;Acc:ZDB-GENE-030131-2841]
44. fnta ENSDARG00000099143 1845 0.844 - - - - - - 0.844 - - farnesyltransferase, CAAX box, alpha [Source:ZFIN;Acc:ZDB-GENE-030131-866]
45. zgc:173709 86 0.844 - - - - 0.844 - - - - zgc:173709
46. nsmce4a ENSDARG00000024311 125 0.843 - - - - 0.843 - - - - NSE4 homolog A, SMC5-SMC6 complex component [Source:ZFIN;Acc:ZDB-GENE-050522-111]
47. C5H11orf1 C5H11orf1 78 0.842 - - - - 0.842 - - - -
48. zmynd11 ENSDARG00000057249, ENSDARG00000114501 2067 0.842 - - - - - - 0.842 - - zinc finger, MYND-type containing 11 [Source:ZFIN;Acc:ZDB-GENE-050522-301]
49. zgc:158257 831 0.841 - - - - - - 0.841 - - zgc:158257
50. snx29 ENSDARG00000077317 239 0.84 - - - - 0.840 - - - - sorting nexin 29 [Source:ZFIN;Acc:ZDB-GENE-121105-13]
51. RBPMS ENSDARG00000099396 61 0.84 - - - - 0.840 - - - - RNA binding protein, mRNA processing factor [Source:ZFIN;Acc:ZDB-GENE-161017-145]
52. PLA2G3_1 PLA2G3_1 411 0.84 - - - - 0.840 - - - -
53. tgm5l ENSDARG00000098837 174 0.839 - - - - 0.839 - - - - transglutaminase 5, like [Source:ZFIN;Acc:ZDB-GENE-110411-176]
54. dnase1l3 dnase1l3 455 0.839 - - - - 0.839 - - - -
55. rmi1 ENSDARG00000041376 674 0.839 - - - - 0.839 - - - - RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-829]
56. tax1bp1b ENSDARG00000056856 4526 0.838 - - - - - - 0.838 - - Tax1 (human T-cell leukemia virus type I) binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2872]
57. si:dkey-14d8.9 si:dkey-14d8.9 66 0.838 - - - - 0.838 - - - -
58. WIPF1 WIPF1 32 0.837 - - - - 0.837 - - - -
59. rab14_1 ENSDARG00000074246 481 0.837 - - - - 0.837 - - - - RAB14, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-030826-20]
60. cep57l1 ENSDARG00000002826 521 0.837 - - - - 0.837 - - - - centrosomal protein 57, like 1 [Source:ZFIN;Acc:ZDB-GENE-040808-27]
61. csrp2bp 2642 0.837 - - - - - - 0.837 - - csrp2 binding protein
62. wbscr22 wbscr22 644 0.836 - - - - 0.836 - - - -
63. ppp1r3cb ENSDARG00000014554 2507 0.834 - 0.834 - - - - - - - protein phosphatase 1, regulatory subunit 3Cb [Source:ZFIN;Acc:ZDB-GENE-040426-1733]
64. tsen15 ENSDARG00000069280 240 0.834 - - - - 0.834 - - - - TSEN15 tRNA splicing endonuclease subunit [Source:ZFIN;Acc:ZDB-GENE-041008-211]
65. PLXNB2 PLXNB2 99 0.833 - - - - 0.833 - - - -
66. si:ch211-51h9.7 ENSDARG00000074720 227 0.832 - - - - 0.832 - - - - si:ch211-51h9.7 [Source:ZFIN;Acc:ZDB-GENE-081104-235]
67. aars2 ENSDARG00000107385 190 0.831 - - - - 0.831 - - - - alanyl-tRNA synthetase 2, mitochondrial (putative) [Source:ZFIN;Acc:ZDB-GENE-041008-213]
68. lrrc32 ENSDARG00000040621 348 0.829 - - - - 0.829 - - - - leucine rich repeat containing 32 [Source:ZFIN;Acc:ZDB-GENE-090630-1]
69. dnajc7_1 ENSDARG00000058148 687 0.829 - 0.829 - - - - - - - DnaJ (Hsp40) homolog, subfamily C, member 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2483]
70. mafb ENSDARG00000076520 139 0.828 - - - - 0.828 - - - - v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog b (paralog b) [Source:ZFIN;Acc:ZDB-GENE-141211-38]
71. pggt1b ENSDARG00000103464 441 0.828 - - - - 0.828 - - - - protein geranylgeranyltransferase type I, beta subunit [Source:ZFIN;Acc:ZDB-GENE-050913-85]
72. TMEM150A_1 TMEM150A_1 90 0.827 - - - - 0.827 - - - -
73. deptor ENSDARG00000040930 191 0.825 - - - - 0.825 - - - - DEP domain containing MTOR-interacting protein [Source:ZFIN;Acc:ZDB-GENE-061013-453]
74. sccpdhb ENSDARG00000024564 707 0.825 - - - - 0.825 - - - - saccharopine dehydrogenase b [Source:ZFIN;Acc:ZDB-GENE-041010-211]
75. stx2a ENSDARG00000004618 271 0.825 - - - - - 0.825 - - - syntaxin 2a [Source:ZFIN;Acc:ZDB-GENE-040801-80]
76. arhgef16 ENSDARG00000077114 759 0.825 - - - - 0.825 - - - - Rho guanine nucleotide exchange factor (GEF) 16 [Source:ZFIN;Acc:ZDB-GENE-081104-446]
77. sema4ga ENSDARG00000076595 24 0.823 - - - - 0.823 - - - - sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4Ga [Source:ZFIN;Acc:ZDB-GENE-060503-381]
78. CABZ01039859.1 ENSDARG00000076361 540 0.823 - - - - 0.823 - - - - beta-1,4 N-acetylgalactosaminyltransferase 2-like [Source:NCBI gene;Acc:100333855]
79. CR450842.1 CR450842.1 129 0.822 - - - - 0.822 - - - -
80. SMC6 ENSDARG00000091821 165 0.822 - - - - 0.822 - - - - structural maintenance of chromosomes 6 [Source:ZFIN;Acc:ZDB-GENE-110303-1]
81. PKN2 ENSDARG00000101293 358 0.821 - - - - 0.821 - - - - protein kinase N2 [Source:HGNC Symbol;Acc:HGNC:9406]
82. senp3b ENSDARG00000056741 1296 0.82 - - - - 0.820 - - - - SUMO specific peptidase 3b [Source:ZFIN;Acc:ZDB-GENE-030131-6714]
83. gsr ENSDARG00000019236, ENSDARG00000114106 1149 0.82 - - - - - - 0.820 - - glutathione reductase [Source:ZFIN;Acc:ZDB-GENE-050522-116]
84. cpb2 ENSDARG00000037144, ENSDARG00000113001 158 0.82 - - - - - 0.820 - - - carboxypeptidase B2 (plasma) [Source:ZFIN;Acc:ZDB-GENE-050522-259]
85. opa3 ENSDARG00000061761 1114 0.819 - - - - - 0.819 - - - optic atrophy 3 [Source:ZFIN;Acc:ZDB-GENE-050210-1]
86. yipf4 ENSDARG00000030957, ENSDARG00000109994 4665 0.818 - - - - - - 0.818 - - Yip1 domain family, member 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2253]
87. srprb ENSDARG00000030949 1670 0.818 - - - - - - 0.818 - - SRP receptor subunit beta [Source:ZFIN;Acc:ZDB-GENE-040718-311]
88. rlbp1a ENSDARG00000012504 111 0.817 - - - - 0.817 - - - - retinaldehyde binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1662]
89. nom1 ENSDARG00000060027, ENSDARG00000112720 831 0.816 - - - - 0.816 - - - - nucleolar protein with MIF4G domain 1 [Source:ZFIN;Acc:ZDB-GENE-060503-321]
90. sptlc2a ENSDARG00000018976 937 0.815 - - - - - 0.815 - - - serine palmitoyltransferase, long chain base subunit 2a [Source:ZFIN;Acc:ZDB-GENE-050522-23]
91. adrm1 ENSDARG00000058560, ENSDARG00000113912 1728 0.815 - - - - - - 0.815 - - adhesion regulating molecule 1 [Source:ZFIN;Acc:ZDB-GENE-040426-905]
92. SCAF8 1618 0.815 - 0.815 - - - - - - - SR-related CTD-associated factor 8, transcript variant X3
93. impdh2 ENSDARG00000006900 3197 0.815 - - - - - - 0.815 - - IMP (inosine 5'-monophosphate) dehydrogenase 2 [Source:ZFIN;Acc:ZDB-GENE-030114-5]
94. ACVR1B ACVR1B 4824 0.815 - - - - - 0.815 - - -
95. rpp25l ENSDARG00000070131 492 0.814 - - - - 0.814 - - - - ribonuclease P/MRP 25 subunit-like [Source:ZFIN;Acc:ZDB-GENE-040718-275]
96. GPN1 ENSDARG00000043928 566 0.814 - - - - 0.814 - - - - GPN-loop GTPase 1 [Source:ZFIN;Acc:ZDB-GENE-040801-154]
97. olfm2b ENSDARG00000102825 741 0.813 - - - - - 0.813 - - - olfactomedin 2b [Source:ZFIN;Acc:ZDB-GENE-040426-2402]
98. gcnt4a ENSDARG00000035198, ENSDARG00000110336 661 0.812 - - - - 0.812 - - - - glucosaminyl (N-acetyl) transferase 4, core 2, a [Source:ZFIN;Acc:ZDB-GENE-030131-3231]
99. rnf144aa ENSDARG00000020600 768 0.811 - - - - 0.811 - - - - ring finger protein 144aa [Source:ZFIN;Acc:ZDB-GENE-041001-88]
100. cul1a ENSDARG00000019239, ENSDARG00000113068, ENSDARG00000114068 2110 0.811 - 0.811 - - - - - - - cullin 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2603]

There are 512 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA