Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for pcbp3

Gene Name Gene ID Reads Annotation
pcbp3 ENSDARG00000054378 74 poly(rC) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-050522-157]










Genes with expression patterns similar to pcbp3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pcbp3 ENSDARG00000054378 74 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 poly(rC) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-050522-157]
2. lhx5 ENSDARG00000057936 785 2.751 - 1.000 - - - 0.759 0.992 - - LIM homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-484]
3. TMEM57 TMEM57 260 2.629 - 1.000 - - - 0.708 0.921 - -
4. fez1 ENSDARG00000023174 701 2.607 - 1.000 - - - 0.810 0.797 - - fasciculation and elongation protein zeta 1 (zygin I) [Source:ZFIN;Acc:ZDB-GENE-040426-2723]
5. SMARCA4 ENSDARG00000104339 48 2.586 - 1.000 - - 0.744 - 0.842 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 [Source:HGNC Symbol;Acc:HGNC:11100]
6. aatkb ENSDARG00000104442 392 2.567 - 1.000 - - - 0.780 0.787 - - apoptosis-associated tyrosine kinase b [Source:ZFIN;Acc:ZDB-GENE-100812-6]
7. LINGO2 LINGO2 300 2.544 - 0.880 - - - 0.733 0.931 - -
8. cacng8b ENSDARG00000070626 176 2.538 - 0.794 - - - 0.755 0.989 - - calcium channel, voltage-dependent, gamma subunit 8b [Source:ZFIN;Acc:ZDB-GENE-100921-72]
9. ROBO3_1 ROBO3_1 468 2.512 - 0.893 - - - 0.717 0.902 - -
10. cacng2a ENSDARG00000032565 99 1.997 - 1.000 - - - - 0.997 - - calcium channel, voltage-dependent, gamma subunit 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1401]
11. DOCK4 DOCK4 78 1.994 - 1.000 - - - - 0.994 - -
12. erap2 ENSDARG00000098618 16 1.982 - 1.000 - - - - 0.982 - - endoplasmic reticulum aminopeptidase 2 [Source:ZFIN;Acc:ZDB-GENE-080402-6]
13. SNORD30 SNORD30 34 1.964 - 1.000 - - 0.964 - - - -
14. GAS2 18 1.934 - 1.000 - - 0.934 - - - - growth arrest specific 2, transcript variant X1
15. arhgef9a ENSDARG00000061746 58 1.933 - 1.000 - - - - 0.933 - - Cdc42 guanine nucleotide exchange factor (GEF) 9a [Source:ZFIN;Acc:ZDB-GENE-070705-271]
16. BX470131.1 BX470131.1 86 1.933 - 1.000 - - - - 0.933 - -
17. LMTK3 LMTK3 222 1.906 - 1.000 - - - - 0.906 - -
18. bhlhe22 ENSDARG00000058039 1673 1.906 - 0.954 - - - - 0.952 - - basic helix-loop-helix family, member e22 [Source:ZFIN;Acc:ZDB-GENE-040426-1411]
19. CABZ01021538.1 CABZ01021538.1 67 1.895 - 1.000 - - - - 0.895 - -
20. pdzd4 175 1.894 - 1.000 - - - - 0.894 - - PDZ domain containing 4, transcript variant X2
21. st6gal1 ENSDARG00000044514 142 1.88 - 1.000 - - - - 0.880 - - ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 [Source:ZFIN;Acc:ZDB-GENE-060322-3]
22. atp2b2 ENSDARG00000044902, ENSDARG00000063433 140 1.843 - 1.000 - - - - 0.843 - - ATPase plasma membrane Ca2+ transporting 2 [Source:ZFIN;Acc:ZDB-GENE-061016-1]
23. plscr3a ENSDARG00000093078 7 1.842 - 1.000 - - - - 0.842 - - phospholipid scramblase 3a [Source:ZFIN;Acc:ZDB-GENE-060531-17]
24. si:dkey-193c22.1 ENSDARG00000093687 104 1.842 - 1.000 - - - - 0.842 - - si:dkey-193c22.1 [Source:ZFIN;Acc:ZDB-GENE-030131-7957]
25. rassf4 ENSDARG00000012460 43 1.842 - 1.000 - - - - 0.842 - - Ras association (RalGDS/AF-6) domain family member 4 [Source:ZFIN;Acc:ZDB-GENE-050102-3]
26. cdk5r1a ENSDARG00000037916 46 1.842 - 1.000 - - - - 0.842 - - cyclin-dependent kinase 5, regulatory subunit 1a (p35) [Source:ZFIN;Acc:ZDB-GENE-080723-17]
27. cldnd ENSDARG00000006580 17 1.842 - 1.000 - - - - 0.842 - - claudin d [Source:ZFIN;Acc:ZDB-GENE-010328-4]
28. lhx1b ENSDARG00000007944, ENSDARG00000111635 254 1.819 - 0.880 - - - - 0.939 - - LIM homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-980526-116]
29. SV2B SV2B 208 1.805 - - - - - 0.808 0.997 - -
30. scg2b ENSDARG00000038574 345 1.798 - 1.000 - - - - 0.798 - - secretogranin II (chromogranin C), b [Source:ZFIN;Acc:ZDB-GENE-061103-160]
31. dmrt3a ENSDARG00000035290, ENSDARG00000114587 115 1.783 - - - - - 0.831 0.952 - - doublesex and mab-3 related transcription factor 3a [Source:ZFIN;Acc:ZDB-GENE-021220-3]
32. glrba ENSDARG00000052782, ENSDARG00000117018 4 1.779 - 0.880 - - - - 0.899 - - glycine receptor, beta a [Source:ZFIN;Acc:ZDB-GENE-010410-2]
33. CABZ01061873.1 CABZ01061873.1 51 1.77 - 0.880 - - - - 0.890 - -
34. LRFN4 LRFN4 59 1.767 - 1.000 - - - - 0.767 - -
35. elavl4 ENSDARG00000045639 998 1.765 - 0.794 - - - - 0.971 - - ELAV like neuron-specific RNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-990415-246]
36. cers6 ENSDARG00000053583 247 1.763 - - - - - 0.831 0.932 - - ceramide synthase 6 [Source:ZFIN;Acc:ZDB-GENE-070522-1]
37. gad1b ENSDARG00000027419 440 1.755 - 1.000 - - - - 0.755 - - glutamate decarboxylase 1b [Source:ZFIN;Acc:ZDB-GENE-030909-3]
38. lhfpl4a ENSDARG00000111810 206 1.754 - 0.875 - - - - 0.879 - - lipoma HMGIC fusion partner-like 4a [Source:ZFIN;Acc:ZDB-GENE-111017-1]
39. pcyt1ba ENSDARG00000058162 206 1.752 - 1.000 - - - - 0.752 - - phosphate cytidylyltransferase 1, choline, beta a [Source:ZFIN;Acc:ZDB-GENE-061220-4]
40. emp1 ENSDARG00000069632 251 1.752 - - - - - 0.817 0.935 - - epithelial membrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-070822-2]
41. calb2a ENSDARG00000041062, ENSDARG00000110220 459 1.751 - - - - - 0.797 0.954 - - calbindin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1677]
42. nkx1.2lb ENSDARG00000099427 220 1.746 - - - - - 0.780 0.966 - - NK1 transcription factor related 2-like,b [Source:ZFIN;Acc:ZDB-GENE-040615-2]
43. b3galnt2 ENSDARG00000046133 68 1.746 - 0.847 - - - - 0.899 - - beta-1,3-N-acetylgalactosaminyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050522-358]
44. mb21d2a mb21d2a 421 1.744 - 0.835 - - - - 0.909 - -
45. slc6a5_1 ENSDARG00000067964, ENSDARG00000111378 1111 1.74 - - - - - 0.758 0.982 - - solute carrier family 6 (neurotransmitter transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-050105-2]
46. stmn4l ENSDARG00000043932 654 1.734 - - - - - 0.825 0.909 - - stathmin-like 4, like [Source:ZFIN;Acc:ZDB-GENE-040718-301]
47. stxbp1a ENSDARG00000001994 5154 1.729 - - - - - 0.783 0.946 - - syntaxin binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050626-106]
48. rims2b ENSDARG00000102690 275 1.729 - 0.875 - - - - 0.854 - - regulating synaptic membrane exocytosis 2b [Source:ZFIN;Acc:ZDB-GENE-060503-893]
49. sncgb ENSDARG00000109715 1014 1.727 - - - - - 0.749 0.978 - - synuclein, gamma b (breast cancer-specific protein 1) [Source:ZFIN;Acc:ZDB-GENE-050522-235]
50. gabrb3 ENSDARG00000023771, ENSDARG00000114822 180 1.726 - 1.000 - - - - 0.726 - - gamma-aminobutyric acid (GABA) A receptor, beta 3 [Source:ZFIN;Acc:ZDB-GENE-101102-2]
51. necap1 ENSDARG00000020798 612 1.724 - - - - - 0.787 0.937 - - NECAP endocytosis associated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1682]
52. pigf ENSDARG00000032780 7 1.722 - 0.880 - - - - 0.842 - - phosphatidylinositol glycan anchor biosynthesis, class F [Source:ZFIN;Acc:ZDB-GENE-040426-1801]
53. amph ENSDARG00000007663 599 1.72 - - - - - 0.804 0.916 - - amphiphysin [Source:ZFIN;Acc:ZDB-GENE-040426-1711]
54. st8sia5 ENSDARG00000036584 529 1.719 - - - - - 0.769 0.950 - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 [Source:ZFIN;Acc:ZDB-GENE-060322-8]
55. SEMA7A ENSDARG00000078707 465 1.717 - - - - - 0.750 0.967 - - semaphorin 7A [Source:ZFIN;Acc:ZDB-GENE-030131-3633]
56. nhlh2 ENSDARG00000025495 1860 1.715 - 0.829 - - - - 0.886 - - nescient helix loop helix 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1809]
57. kcna1 kcna1 174 1.713 - 1.000 - - - - 0.713 - -
58. CR626874.1 ENSDARG00000100141 55 1.711 - 1.000 0.711 - - - - - -
59. si:ch211-137i24.12 ENSDARG00000094537 35 1.71 - 0.710 - - - - 1.000 - - si:ch211-137i24.12 [Source:ZFIN;Acc:ZDB-GENE-060526-36]
60. atp2b3a ENSDARG00000043474, ENSDARG00000112865 914 1.707 - - - - - 0.810 0.897 - - ATPase plasma membrane Ca2+ transporting 3a [Source:ZFIN;Acc:ZDB-GENE-040718-174]
61. TUBB8P7_1 TUBB8P7_1 2722 1.707 - - - - - 0.745 0.962 - -
62. GADD45G_1 GADD45G_1 236 1.707 - 1.000 - - - - 0.707 - -
63. rdh12 ENSDARG00000018069 396 1.705 - - - - - 0.744 0.961 - - retinol dehydrogenase 12 [Source:ZFIN;Acc:ZDB-GENE-040718-9]
64. scrt1b ENSDARG00000040214, ENSDARG00000110984 533 1.702 - - - - - 0.815 0.887 - - scratch family zinc finger 1b [Source:ZFIN;Acc:ZDB-GENE-050327-72]
65. rab3ab ENSDARG00000043835 1267 1.701 - - - - - 0.741 0.960 - - RAB3A, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-041210-268]
66. SNAP91 ENSDARG00000098809 556 1.701 - - - - - 0.726 0.975 - - synaptosomal-associated protein 91 [Source:ZFIN;Acc:ZDB-GENE-100422-6]
67. camta1a ENSDARG00000077428, ENSDARG00000116922 176 1.701 - - - - - 0.792 0.909 - - calmodulin binding transcription activator 1a [Source:ZFIN;Acc:ZDB-GENE-090312-183]
68. lrrc4.1 ENSDARG00000069402 323 1.698 - - - - - 0.755 0.943 - - leucine rich repeat containing 4.1 [Source:ZFIN;Acc:ZDB-GENE-041210-129]
69. TUSC5 TUSC5 1436 1.698 - - - - - 0.778 0.920 - -
70. sez6l2 ENSDARG00000076052 360 1.697 - - - - - 0.746 0.951 - - seizure related 6 homolog (mouse)-like 2 [Source:ZFIN;Acc:ZDB-GENE-091204-189]
71. slc25a6 ENSDARG00000005853, ENSDARG00000113366 99 1.694 - - - - - 0.796 0.898 - - solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6 [Source:ZFIN;Acc:ZDB-GENE-070912-446]
72. sh3gl2 sh3gl2 1305 1.688 - - - - - 0.757 0.931 - -
73. snap25a ENSDARG00000020609 4537 1.683 - - - - - 0.733 0.950 - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
74. napg napg 645 1.676 - - - - - 0.762 0.914 - -
75. fscn1b ENSDARG00000037747, ENSDARG00000111370 75 1.676 - 0.852 - - - 0.824 - - - fascin actin-bundling protein 1b [Source:ZFIN;Acc:ZDB-GENE-120507-1]
76. stx1b ENSDARG00000000503 2724 1.67 - - - - - 0.710 0.960 - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
77. aldocb ENSDARG00000019702 2111 1.669 - - - - - 0.751 0.918 - - aldolase C, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-030821-1]
78. CABZ01065506.1 CABZ01065506.1 204 1.669 - - - - - 0.740 0.929 - -
79. stmn2a ENSDARG00000033234 2272 1.669 - - - - - 0.738 0.931 - - stathmin 2a [Source:ZFIN;Acc:ZDB-GENE-041010-85]
80. AKT3 AKT3 1729 1.668 - - - - - 0.715 0.953 - -
81. kcnc3a ENSDARG00000055855 1821 1.668 - - - - - 0.703 0.965 - - potassium voltage-gated channel, Shaw-related subfamily, member 3a [Source:ZFIN;Acc:ZDB-GENE-100901-1]
82. her4.2_1 ENSDARG00000056729, ENSDARG00000094426 2383 1.66 - 0.826 - - - - 0.834 - - hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
83. cadm3 ENSDARG00000057013 1545 1.66 - - - - - 0.704 0.956 - - cell adhesion molecule 3 [Source:ZFIN;Acc:ZDB-GENE-060512-196]
84. BX957337.1 BX957337.1 1685 1.66 - - - - - 0.718 0.942 - -
85. sypa ENSDARG00000042974, ENSDARG00000110528 3217 1.659 - - - - - 0.732 0.927 - - synaptophysin a [Source:ZFIN;Acc:ZDB-GENE-031104-2]
86. scrt2 ENSDARG00000056175 4331 1.655 - - - - - 0.761 0.894 - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
87. TPPP2 ENSDARG00000035338, ENSDARG00000113727 298 1.653 - - - - - 0.712 0.941 - - tubulin polymerization-promoting protein family member 2 [Source:ZFIN;Acc:ZDB-GENE-140106-24]
88. slc32a1 ENSDARG00000059775 1092 1.652 - - - - - 0.717 0.935 - - solute carrier family 32 (GABA vesicular transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-061201-1]
89. nrxn1a ENSDARG00000061647, ENSDARG00000111866 1069 1.652 - - - - - 0.765 0.887 - - neurexin 1a [Source:ZFIN;Acc:ZDB-GENE-070206-1]
90. scn8ab ENSDARG00000018032, ENSDARG00000112543 883 1.652 - - - - - 0.703 0.949 - - sodium channel, voltage gated, type VIII, alpha subunit b [Source:ZFIN;Acc:ZDB-GENE-060906-2]
91. SKOR2 SKOR2 1041 1.65 - - - - - 0.721 0.929 - -
92. LRFN2 118 1.649 - - - - - 0.731 0.918 - - leucine rich repeat and fibronectin type III domain containing 2
93. stmn1b ENSDARG00000033655 9491 1.645 - - - - - 0.742 0.903 - - stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
94. vsnl1a ENSDARG00000023228 1584 1.643 - - - - - 0.739 0.904 - - visinin-like 1a [Source:ZFIN;Acc:ZDB-GENE-041001-211]
95. adam23a ENSDARG00000062323 580 1.641 - - - - - 0.793 0.848 - - ADAM metallopeptidase domain 23a [Source:ZFIN;Acc:ZDB-GENE-070810-2]
96. olfm1b ENSDARG00000014053 1392 1.635 - - - - - 0.703 0.932 - - olfactomedin 1b [Source:ZFIN;Acc:ZDB-GENE-040801-228]
97. mapk12b ENSDARG00000006409 2246 1.63 - - - - - 0.720 0.910 - - mitogen-activated protein kinase 12b [Source:ZFIN;Acc:ZDB-GENE-041210-123]
98. thsd7ba ENSDARG00000095022 231 1.628 - - - - - 0.769 0.859 - - thrombospondin, type I, domain containing 7Ba [Source:ZFIN;Acc:ZDB-GENE-070621-2]
99. cnrip1a ENSDARG00000091683 1491 1.618 - - - - - 0.711 0.907 - - cannabinoid receptor interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-126]
100. dnajc6 ENSDARG00000079891 438 1.618 - - - - - 0.708 0.910 - - DnaJ (Hsp40) homolog, subfamily C, member 6 [Source:ZFIN;Acc:ZDB-GENE-080104-2]

There are 1448 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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