Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for pcbp2

Gene Name Gene ID Reads Annotation
pcbp2 ENSDARG00000099039 4248 poly(rC) binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-563]










Genes with expression patterns similar to pcbp2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pcbp2 ENSDARG00000099039 4248 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 poly(rC) binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-563]
2. taf13 ENSDARG00000070834, ENSDARG00000109314 1982 2.558 - 0.726 0.986 - - - - - 0.846 TATA-box binding protein associated factor 13 [Source:ZFIN;Acc:ZDB-GENE-030131-2873]
3. vangl2 ENSDARG00000027397 2418 2.449 - 0.776 0.971 - - 0.702 - - - VANGL planar cell polarity protein 2 [Source:ZFIN;Acc:ZDB-GENE-020507-3]
4. plk1 ENSDARG00000058471, ENSDARG00000111745 7020 2.401 - - 0.750 - - 0.840 - - 0.811 polo-like kinase 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-021115-7]
5. nono ENSDARG00000020482, ENSDARG00000115783 12482 2.373 - - - 0.717 - 0.736 0.920 - - non-POU domain containing, octamer-binding [Source:ZFIN;Acc:ZDB-GENE-030131-713]
6. h2afvb ENSDARG00000116491 35692 2.358 - 0.845 - - - 0.792 - 0.721 - H2A histone family, member Vb [Source:ZFIN;Acc:ZDB-GENE-050506-24]
7. aldh6a1 ENSDARG00000053485 7744 2.266 - 0.757 - - - 0.756 0.753 - - aldehyde dehydrogenase 6 family, member A1 [Source:ZFIN;Acc:ZDB-GENE-030131-9192]
8. wdr82 ENSDARG00000014083 3159 2.238 - 0.738 - - - 0.733 - 0.767 - WD repeat domain 82 [Source:ZFIN;Acc:ZDB-GENE-030131-333]
9. prpf8 ENSDARG00000026180 7026 2.215 - 0.721 - - - - 0.755 0.739 - pre-mRNA processing factor 8 [Source:ZFIN;Acc:ZDB-GENE-030131-577]
10. polr2j ENSDARG00000035146 1493 1.867 - - 0.980 - - - - - 0.887 polymerase (RNA) II (DNA directed) polypeptide J [Source:ZFIN;Acc:ZDB-GENE-050522-120]
11. rqcd1 2301 1.835 - - 0.977 - - - - - 0.858 RCD1 required for cell differentiation1 homolog (S. pombe)
12. ARHGAP23 ARHGAP23 3946 1.826 - - 0.995 - - 0.831 - - -
13. ythdf1 ENSDARG00000016447 3391 1.821 - 0.867 0.954 - - - - - - YTH N(6)-methyladenosine RNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2786]
14. rassf1 ENSDARG00000004840 1248 1.813 - - 0.985 - - - 0.828 - - Ras association (RalGDS/AF-6) domain family 1 [Source:ZFIN;Acc:ZDB-GENE-040912-14]
15. gltscr2 gltscr2 5763 1.804 - - 0.922 - - - - - 0.882
16. qars ENSDARG00000010316 2715 1.794 - - 0.959 - - - - - 0.835 glutaminyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-1011]
17. srsf5b ENSDARG00000027734 6996 1.792 - - 0.982 - - 0.810 - - - serine/arginine-rich splicing factor 5b [Source:ZFIN;Acc:ZDB-GENE-040718-354]
18. znf703 ENSDARG00000035563, ENSDARG00000112912 2226 1.782 - - 0.974 - - - 0.808 - - zinc finger protein 703 [Source:ZFIN;Acc:ZDB-GENE-010717-1]
19. sgut1 3470 1.778 - - 0.949 - - - - - 0.829 SGT1 homolog, MIS12 kinetochore complex assembly cochaperone, transcript variant X1
20. sh3rf1 ENSDARG00000070470 1463 1.777 - - 0.989 - - - - - 0.788 SH3 domain containing ring finger 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6288]
21. MAF1 ENSDARG00000013122 6899 1.768 - - 0.982 - - - - - 0.786 MAF1 homolog, negative regulator of RNA polymerase III [Source:ZFIN;Acc:ZDB-GENE-040426-2788]
22. bida ENSDARG00000069290, ENSDARG00000112031 825 1.762 - - 0.982 - - - - - 0.780 BH3 interacting domain death agonist [Source:ZFIN;Acc:ZDB-GENE-050419-35]
23. ppapdc1b ppapdc1b 2866 1.759 - - 0.942 - - - 0.817 - -
24. si:ch73-18b11.1 si:ch73-18b11.1 3840 1.754 - - 0.929 - - - 0.825 - -
25. KIAA0355 3250 1.752 - - 0.962 - - - - - 0.790 KIAA0355 ortholog, transcript variant X1
26. MAP4K4 ENSDARG00000098670 4665 1.748 - - - - - 0.798 0.950 - - mitogen-activated protein kinase kinase kinase kinase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6722]
27. fzr1 fzr1 2984 1.746 - - 0.988 - - 0.758 - - -
28. med13b ENSDARG00000003910 1143 1.745 - - 0.995 - - 0.750 - - - mediator complex subunit 13b [Source:ZFIN;Acc:ZDB-GENE-030131-3529]
29. ncoa2 ENSDARG00000017929 2520 1.743 - - 0.975 - - 0.768 - - - nuclear receptor coactivator 2 [Source:ZFIN;Acc:ZDB-GENE-010406-3]
30. vta1 ENSDARG00000013732 6072 1.742 - 0.755 0.987 - - - - - - vesicle (multivesicular body) trafficking 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2154]
31. ctdsp1 ENSDARG00000040674 2828 1.74 - - 0.980 - - - - - 0.760 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-050522-523]
32. syn1 ENSDARG00000060368, ENSDARG00000111164 397 1.738 - - 0.996 - - 0.742 - - - synapsin I [Source:ZFIN;Acc:ZDB-GENE-081105-93]
33. kmt2ca ENSDARG00000079312 2109 1.735 - 0.747 0.988 - - - - - - lysine (K)-specific methyltransferase 2Ca [Source:ZFIN;Acc:ZDB-GENE-080520-3]
34. znf598 ENSDARG00000014945 1838 1.734 - 0.751 0.983 - - - - - - zinc finger protein 598 [Source:ZFIN;Acc:ZDB-GENE-060602-3]
35. tm9sf4 ENSDARG00000002536 1684 1.729 - 0.740 0.989 - - - - - - transmembrane 9 superfamily protein member 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1575]
36. C7H20orf27 C7H20orf27 1864 1.728 - - 0.958 - - - - - 0.770
37. eif4a3 ENSDARG00000102978 16162 1.727 - - - - - 0.804 0.923 - - eukaryotic translation initiation factor 4A3 [Source:ZFIN;Acc:ZDB-GENE-040426-915]
38. ube2i2 ube2i2 4828 1.726 - - - - - 0.812 - - 0.914
39. pip5k1ab ENSDARG00000024642 1988 1.724 - 0.742 0.982 - - - - - - phosphatidylinositol-4-phosphate 5-kinase, type I, alpha, b [Source:ZFIN;Acc:ZDB-GENE-041111-123]
40. ZPLXDC2 ZPLXDC2 1298 1.723 - - 0.992 - - 0.731 - - -
41. elmod2 ENSDARG00000101669 3101 1.717 - - 0.964 - - 0.753 - - - ELMO/CED-12 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060824-2]
42. brd4 ENSDARG00000078904 5367 1.715 - 0.747 0.968 - - - - - - bromodomain containing 4 [Source:ZFIN;Acc:ZDB-GENE-030131-267]
43. carm1 ENSDARG00000018698 5599 1.711 - 0.757 0.954 - - - - - - coactivator-associated arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040724-77]
44. eif4g2a ENSDARG00000020377, ENSDARG00000112658 6895 1.708 - - - - - 0.854 - - 0.854 eukaryotic translation initiation factor 4, gamma 2a [Source:ZFIN;Acc:ZDB-GENE-030131-2173]
45. ppp5c ENSDARG00000034313 8794 1.707 - - 0.792 - - - 0.915 - - protein phosphatase 5, catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-050327-75]
46. SEC24A ENSDARG00000104375 2614 1.703 - - 0.906 - - - 0.797 - - SEC24 homolog A, COPII coat complex component [Source:ZFIN;Acc:ZDB-GENE-120926-1]
47. zbtb18 ENSDARG00000028228 3653 1.703 - - 0.991 - - 0.712 - - - zinc finger and BTB domain containing 18 [Source:ZFIN;Acc:ZDB-GENE-050419-73]
48. sf3b2 ENSDARG00000018049 4675 1.699 - - 0.917 - - 0.782 - - - splicing factor 3b, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-070928-1]
49. ciao1 ENSDARG00000059212 1222 1.698 - 0.709 0.989 - - - - - - cytosolic iron-sulfur assembly component 1 [Source:ZFIN;Acc:ZDB-GENE-040426-839]
50. psma8 ENSDARG00000010965 8321 1.693 - - - - - - 0.937 - 0.756 proteasome subunit alpha 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2194]
51. lin7c ENSDARG00000027322 3083 1.684 - - - - - - 0.821 - 0.863 lin-7 homolog C (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-041011-2]
52. tcf3b ENSDARG00000099999, ENSDARG00000112646 3589 1.683 - 0.711 0.972 - - - - - - transcription factor 3b [Source:ZFIN;Acc:ZDB-GENE-051113-64]
53. adh5 ENSDARG00000080010, ENSDARG00000111574 4980 1.682 - - 0.978 - - 0.704 - - - alcohol dehydrogenase 5 [Source:ZFIN;Acc:ZDB-GENE-011003-1]
54. efnb3b ENSDARG00000042277 5823 1.682 - - 0.943 - - 0.739 - - - ephrin-B3b [Source:ZFIN;Acc:ZDB-GENE-010618-3]
55. ubtf ENSDARG00000035066 4070 1.682 - - 0.953 - - 0.729 - - - upstream binding transcription factor [Source:ZFIN;Acc:ZDB-GENE-030616-252]
56. gapdhs ENSDARG00000039914 8760 1.68 - 0.766 - - - - 0.914 - - glyceraldehyde-3-phosphate dehydrogenase, spermatogenic [Source:ZFIN;Acc:ZDB-GENE-020913-1]
57. kmt2bb ENSDARG00000060697 5230 1.68 - - - - - - 0.831 - 0.849 lysine (K)-specific methyltransferase 2Bb [Source:ZFIN;Acc:ZDB-GENE-080521-1]
58. WDFY3 ENSDARG00000078890 2092 1.676 - - 0.974 - - 0.702 - - - WD repeat and FYVE domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070705-153]
59. pinx1 ENSDARG00000023532 4452 1.665 - - 0.943 - - 0.722 - - - PIN2 (TERF1) interacting telomerase inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-030515-2]
60. ube2nb ENSDARG00000045877 4583 1.655 - 0.785 0.870 - - - - - - ubiquitin-conjugating enzyme E2Nb [Source:ZFIN;Acc:ZDB-GENE-040426-1291]
61. dag1 ENSDARG00000016153 10886 1.654 - - - - - - 0.803 - 0.851 dystroglycan 1 [Source:ZFIN;Acc:ZDB-GENE-021223-1]
62. ap2b1 ENSDARG00000035152 2912 1.649 - - - - - 0.780 - - 0.869 adaptor related protein complex 2 subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6564]
63. eif3ja ENSDARG00000012603 6324 1.647 - 0.751 - - - - - - 0.896 eukaryotic translation initiation factor 3, subunit Ja [Source:ZFIN;Acc:ZDB-GENE-040426-1266]
64. vps35 ENSDARG00000008224 13245 1.643 - - - - - 0.830 - - 0.813 vacuolar protein sorting 35 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-2042]
65. gtf2a1 ENSDARG00000011000 2026 1.639 - - 0.922 - - - - - 0.717 general transcription factor IIA, 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2694]
66. glud1a ENSDARG00000008816, ENSDARG00000114252 3468 1.637 - - - - - - 0.929 - 0.708 glutamate dehydrogenase 1a [Source:ZFIN;Acc:ZDB-GENE-030114-2]
67. rab5if ENSDARG00000074790 8807 1.637 - 0.804 - - - - - - 0.833 RAB5 interacting factor [Source:ZFIN;Acc:ZDB-GENE-030131-5938]
68. GABARAP GABARAP 8341 1.633 - 0.806 - - - - - - 0.827
69. ppih ENSDARG00000041530 2085 1.631 - 0.725 - - - - - - 0.906 peptidylprolyl isomerase H (cyclophilin H) [Source:ZFIN;Acc:ZDB-GENE-040625-127]
70. DALRD3 ENSDARG00000068602 3062 1.63 - - - - - 0.780 - - 0.850 DALR anticodon binding domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-061103-415]
71. uchl3 ENSDARG00000030177, ENSDARG00000109434 2843 1.626 - - - - - 0.816 - - 0.810 ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase) [Source:ZFIN;Acc:ZDB-GENE-050522-158]
72. mmd ENSDARG00000040387 4522 1.623 - 0.720 - - - - 0.903 - - monocyte to macrophage differentiation-associated [Source:ZFIN;Acc:ZDB-GENE-051120-39]
73. hsbp1b ENSDARG00000041921 6170 1.622 - 0.841 - - - 0.781 - - - heat shock factor binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1721]
74. erlin1 ENSDARG00000021991 5664 1.621 - - 0.908 - - 0.713 - - - ER lipid raft associated 1 [Source:ZFIN;Acc:ZDB-GENE-050327-13]
75. atp1a3a ENSDARG00000018259 5393 1.619 - - 0.916 - - - - 0.703 - ATPase Na+/K+ transporting subunit alpha 3a [Source:ZFIN;Acc:ZDB-GENE-001212-7]
76. cbx1a ENSDARG00000004189, ENSDARG00000110945 3297 1.616 - 0.775 - - - - - - 0.841 chromobox homolog 1a (HP1 beta homolog Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-4945]
77. ralbp1 ENSDARG00000078653 2440 1.615 - 0.790 - - - - 0.825 - - ralA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2098]
78. ube2g1a ENSDARG00000015292, ENSDARG00000112281 3207 1.613 - 0.706 0.907 - - - - - - ubiquitin-conjugating enzyme E2G 1a (UBC7 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-6065]
79. nhsl1b ENSDARG00000042627 3697 1.61 - 0.785 - - - - 0.825 - - NHS-like 1b [Source:ZFIN;Acc:ZDB-GENE-040910-1]
80. lrp1b lrp1b 3216 1.609 - - - - - - 0.803 - 0.806
81. scoca ENSDARG00000087333 1739 1.604 - 0.782 - - - - - - 0.822 short coiled-coil protein a [Source:ZFIN;Acc:ZDB-GENE-061013-114]
82. ctbp2 ctbp2 3255 1.598 - - - - - 0.745 - - 0.853
83. thoc7 ENSDARG00000015394 3824 1.597 - 0.723 - - - - - - 0.874 THO complex 7 [Source:ZFIN;Acc:ZDB-GENE-040801-17]
84. ctnna1 ENSDARG00000102441 7984 1.594 - 0.794 - - - 0.800 - - - catenin (cadherin-associated protein), alpha 1 [Source:ZFIN;Acc:ZDB-GENE-991207-24]
85. fastk ENSDARG00000077075 1619 1.591 - 0.768 - - - - 0.823 - - Fas-activated serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-070912-680]
86. mllt10 ENSDARG00000045401 7557 1.59 - 0.761 - - - 0.829 - - - MLLT10, histone lysine methyltransferase DOT1L cofactor [Source:ZFIN;Acc:ZDB-GENE-041114-176]
87. col16a1 ENSDARG00000009194 5600 1.588 - 0.726 - - - - 0.862 - - collagen, type XVI, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-060503-351]
88. rbmx ENSDARG00000014244 3445 1.588 - 0.746 - - - 0.842 - - - RNA binding motif protein X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-579]
89. got2b ENSDARG00000005840 7891 1.585 - 0.819 - - - - 0.766 - - glutamic-oxaloacetic transaminase 2b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-7917]
90. ap2m1a ENSDARG00000002790 9781 1.583 - 0.796 0.787 - - - - - - adaptor related protein complex 2 subunit mu 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9784]
91. mbd3a ENSDARG00000061774 4047 1.575 - 0.768 - - - - 0.807 - - methyl-CpG binding domain protein 3a [Source:ZFIN;Acc:ZDB-GENE-030131-9077]
92. puf60b ENSDARG00000001241 13827 1.574 - 0.764 - - - 0.810 - - - poly-U binding splicing factor b [Source:ZFIN;Acc:ZDB-GENE-040625-116]
93. junbb ENSDARG00000104773 2536 1.573 - - - - - - 0.792 - 0.781 JunB proto-oncogene, AP-1 transcription factor subunit b [Source:ZFIN;Acc:ZDB-GENE-040426-2666]
94. zgc:158409 zgc:158409 21963 1.573 - - - - - 0.804 0.769 - -
95. kpnb3 ENSDARG00000040245 7967 1.573 - 0.791 - - - - - - 0.782 karyopherin (importin) beta 3 [Source:ZFIN;Acc:ZDB-GENE-030424-2]
96. fam91a1 ENSDARG00000003320, ENSDARG00000116699 1566 1.571 - 0.754 - - - - 0.817 - - family with sequence similarity 91, member A1 [Source:ZFIN;Acc:ZDB-GENE-040426-1187]
97. vdac1 ENSDARG00000045132 8051 1.57 - - - - - 0.762 - 0.808 - voltage-dependent anion channel 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6514]
98. pcyt2 ENSDARG00000043003 3506 1.569 - - - - - 0.745 0.824 - - phosphate cytidylyltransferase 2, ethanolamine [Source:ZFIN;Acc:ZDB-GENE-041010-132]
99. axin2 ENSDARG00000100149 4223 1.562 - 0.726 - - - - - - 0.836 axin 2 (conductin, axil) [Source:ZFIN;Acc:ZDB-GENE-000403-2]
100. SLC6A13 ENSDARG00000067567 1617 1.561 0.733 - - - - - 0.828 - - solute carrier family 6 member 13 [Source:HGNC Symbol;Acc:HGNC:11046]

There are 1448 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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