Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for pbxip1b

Gene Name Gene ID Reads Annotation
pbxip1b ENSDARG00000011824 3726 pre-B-cell leukemia homeobox interacting protein 1b [Source:ZFIN;Acc:ZDB-GENE-070112-2032]










Genes with expression patterns similar to pbxip1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pbxip1b ENSDARG00000011824 3726 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 pre-B-cell leukemia homeobox interacting protein 1b [Source:ZFIN;Acc:ZDB-GENE-070112-2032]
2. xirp2a ENSDARG00000071113 7113 3.004 0.791 - 0.750 0.762 0.701 - - - - xin actin binding repeat containing 2a [Source:ZFIN;Acc:ZDB-GENE-040108-7]
3. bckdha ENSDARG00000040555, ENSDARG00000111762 7620 2.785 - 0.948 0.899 - - 0.938 - - - branched chain keto acid dehydrogenase E1, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-050522-376]
4. ube2v1 ENSDARG00000041875 5739 2.772 - 0.946 0.840 - - 0.986 - - - ubiquitin-conjugating enzyme E2 variant 1 [Source:ZFIN;Acc:ZDB-GENE-051030-102]
5. anapc11 ENSDARG00000102531, ENSDARG00000116987 1769 2.664 - 0.943 0.895 - - - - - 0.826 APC11 anaphase promoting complex subunit 11 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-061013-383]
6. mcts1 ENSDARG00000025972 4662 2.639 - - 0.894 - - 0.998 - - 0.747 malignant T cell amplified sequence 1 [Source:ZFIN;Acc:ZDB-GENE-040426-957]
7. tnni2b.1 ENSDARG00000035958 51597 2.522 0.775 - - - 0.767 0.980 - - - troponin I type 2b (skeletal, fast), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-49]
8. mef2ca ENSDARG00000029764 18547 2.356 0.706 - - - 0.802 0.848 - - - myocyte enhancer factor 2ca [Source:ZFIN;Acc:ZDB-GENE-980526-253]
9. tnnt2c ENSDARG00000032242 28801 2.344 0.803 0.770 - - 0.771 - - - - troponin T2c, cardiac [Source:ZFIN;Acc:ZDB-GENE-030520-1]
10. sox6 ENSDARG00000015536 7728 2.339 0.763 - 0.873 - 0.703 - - - - SRY (sex determining region Y)-box 6 [Source:ZFIN;Acc:ZDB-GENE-081120-6]
11. tmem38a ENSDARG00000024047 41883 2.314 0.838 - - 0.719 0.757 - - - - transmembrane protein 38A [Source:ZFIN;Acc:ZDB-GENE-040426-1888]
12. plagx ENSDARG00000036855 3768 1.931 - 0.943 - - - 0.988 - - - pleiomorphic adenoma gene X [Source:ZFIN;Acc:ZDB-GENE-030131-839]
13. canx ENSDARG00000037488 4328 1.908 - - 0.910 - - 0.998 - - - calnexin [Source:ZFIN;Acc:ZDB-GENE-040426-2797]
14. casq2 ENSDARG00000008982 21802 1.887 0.898 0.989 - - - - - - - calsequestrin 2 [Source:ZFIN;Acc:ZDB-GENE-010724-12]
15. creg2 ENSDARG00000000666 643 1.862 - - - - - 0.996 - - 0.866 cellular repressor of E1A-stimulated genes 2 [Source:ZFIN;Acc:ZDB-GENE-041114-173]
16. CABZ01088039.1 CABZ01088039.1 2482 1.856 - - 0.879 - - 0.977 - - -
17. rbm42 ENSDARG00000039910 1111 1.831 - - - - - 0.999 - - 0.832 RNA binding motif protein 42 [Source:ZFIN;Acc:ZDB-GENE-040809-2]
18. rab1ba ENSDARG00000058044 5080 1.83 - - 0.841 - - 0.989 - - - zRAB1B, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-040426-873]
19. actn3a ENSDARG00000013755, ENSDARG00000111128 22706 1.822 0.839 0.983 - - - - - - - actinin alpha 3a [Source:ZFIN;Acc:ZDB-GENE-000329-9]
20. gcn1l1 gcn1l1 6031 1.816 - 0.827 - - - 0.989 - - -
21. usp28 ENSDARG00000008880 1850 1.816 0.824 - - - - 0.992 - - - ubiquitin specific peptidase 28 [Source:ZFIN;Acc:ZDB-GENE-041008-142]
22. khdrbs1b ENSDARG00000070475 18157 1.81 - 0.965 - - - 0.845 - - - KH domain containing, RNA binding, signal transduction associated 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2344]
23. rab5aa ENSDARG00000018602 8947 1.801 - 0.925 0.876 - - - - - - RAB5A, member RAS oncogene family, a [Source:ZFIN;Acc:ZDB-GENE-030131-139]
24. lsm1 ENSDARG00000043177 767 1.798 - 0.935 - - - - - - 0.863 LSM1, U6 small nuclear RNA associated [Source:ZFIN;Acc:ZDB-GENE-040801-68]
25. lamb2 ENSDARG00000002084 3265 1.796 0.813 - - - - 0.983 - - - laminin, beta 2 (laminin S) [Source:ZFIN;Acc:ZDB-GENE-081030-4]
26. casq1b ENSDARG00000018105 2643 1.787 0.809 - - - - 0.978 - - - calsequestrin 1b [Source:ZFIN;Acc:ZDB-GENE-060929-1070]
27. smtnl1 ENSDARG00000041257 7410 1.786 0.825 - 0.961 - - - - - - smoothelin-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-23]
28. si:ch211-251b21.1 ENSDARG00000007275 15724 1.774 - 0.937 0.837 - - - - - - si:ch211-251b21.1 [Source:ZFIN;Acc:ZDB-GENE-060809-5]
29. pes ENSDARG00000018902 3286 1.763 - - - - - 0.999 - - 0.764 pescadillo [Source:ZFIN;Acc:ZDB-GENE-990415-206]
30. BX324201.1 BX324201.1 3302 1.761 0.810 - - - - 0.951 - - -
31. samm50l ENSDARG00000039681 2465 1.76 - - 0.905 - - - - - 0.855 sorting and assembly machinery component 50 homolog, like [Source:ZFIN;Acc:ZDB-GENE-041114-30]
32. klhl41a ENSDARG00000068888 1034 1.759 0.761 - - - - 0.998 - - - kelch-like family member 41a [Source:ZFIN;Acc:ZDB-GENE-081105-22]
33. tmem45b ENSDARG00000056239 2395 1.754 - 0.852 0.902 - - - - - - transmembrane protein 45B [Source:ZFIN;Acc:ZDB-GENE-040426-1904]
34. myoz1a ENSDARG00000056209, ENSDARG00000115885 3668 1.753 0.823 - - - - 0.930 - - - myozenin 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1875]
35. olig2 ENSDARG00000040946 1405 1.751 - - 0.892 - - - - - 0.859 oligodendrocyte lineage transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4013]
36. zgc:63637 zgc:63637 3636 1.748 - - - - - 0.995 - - 0.753
37. pdzrn3b ENSDARG00000073869 1566 1.744 - - 0.891 - - - - - 0.853 PDZ domain containing RING finger 3b [Source:ZFIN;Acc:ZDB-GENE-071022-4]
38. nploc4 ENSDARG00000100487 1262 1.739 - - 0.886 - - - - - 0.853 NPL4 homolog, ubiquitin recognition factor [Source:ZFIN;Acc:ZDB-GENE-030131-5658]
39. chrnd ENSDARG00000019342 2728 1.721 0.729 - - - - 0.992 - - - cholinergic receptor, nicotinic, delta (muscle) [Source:ZFIN;Acc:ZDB-GENE-030131-6665]
40. tmem248 ENSDARG00000018825 1560 1.72 - - 0.891 - - - - - 0.829 transmembrane protein 248 [Source:ZFIN;Acc:ZDB-GENE-050320-103]
41. nt5c2b ENSDARG00000058231 3822 1.704 - - - - - 0.986 - - 0.718 5'-nucleotidase, cytosolic IIb [Source:ZFIN;Acc:ZDB-GENE-061013-522]
42. plp1a ENSDARG00000103732 3544 1.699 - 0.937 0.762 - - - - - - proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
43. tnfaip1 ENSDARG00000041565, ENSDARG00000113688, ENSDARG00000115018 553 1.696 - 0.937 - - - - 0.759 - - tumor necrosis factor, alpha-induced protein 1 (endothelial) [Source:ZFIN;Acc:ZDB-GENE-030131-5610]
44. uqcrc1 ENSDARG00000052304, ENSDARG00000110068 13973 1.696 0.741 0.955 - - - - - - - ubiquinol-cytochrome c reductase core protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1792]
45. mrpl22 ENSDARG00000109961 1374 1.692 0.784 - 0.908 - - - - - - mitochondrial ribosomal protein L22 [Source:ZFIN;Acc:ZDB-GENE-080303-28]
46. phc2b_1 ENSDARG00000013224 1316 1.687 - - 0.882 - - - - - 0.805 polyhomeotic homolog 2b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-1113]
47. KRT18 ENSDARG00000018404, ENSDARG00000109528 6022 1.681 - - 0.885 - - - - - 0.796 keratin 18 [Source:ZFIN;Acc:ZDB-GENE-030411-6]
48. gdi1 ENSDARG00000056122 4106 1.68 - - 0.866 - - - - - 0.814 GDP dissociation inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-050522-504]
49. fitm2 ENSDARG00000034568, ENSDARG00000112035 1717 1.673 0.713 0.960 - - - - - - - fat storage-inducing transmembrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-050508-5]
50. eif4e3 ENSDARG00000005078 1624 1.669 - - 0.886 - - - - - 0.783 eukaryotic translation initiation factor 4E family member 3 [Source:ZFIN;Acc:ZDB-GENE-040912-156]
51. klhl41b ENSDARG00000006757 10762 1.66 0.850 - - - 0.810 - - - - kelch-like family member 41b [Source:ZFIN;Acc:ZDB-GENE-030131-9875]
52. nsun2 ENSDARG00000056665 740 1.656 - - - - - - 0.776 - 0.880 NOP2/Sun RNA methyltransferase family, member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4017]
53. paxip1 ENSDARG00000005606 1417 1.656 - - 0.857 - - - - - 0.799 PAX interacting (with transcription-activation domain) protein 1 [Source:ZFIN;Acc:ZDB-GENE-041010-214]
54. PHB2 PHB2 3755 1.655 0.835 - - - - - - - 0.820
55. rbm34 ENSDARG00000101877 1573 1.653 - 0.795 - - - - - - 0.858 RNA binding motif protein 34 [Source:ZFIN;Acc:ZDB-GENE-040718-77]
56. tra2a ENSDARG00000007863 4449 1.648 - 0.941 - - - - - - 0.707 transformer 2 alpha homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1391]
57. klhl31 ENSDARG00000039066 13656 1.643 - 0.883 - - 0.760 - - - - kelch-like family member 31 [Source:ZFIN;Acc:ZDB-GENE-030131-2052]
58. atp5ib 19664 1.632 0.782 0.850 - - - - - - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit Eb
59. slc20a2 ENSDARG00000060796, ENSDARG00000113613 5420 1.63 0.728 - 0.902 - - - - - - solute carrier family 20 (phosphate transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-060929-828]
60. slit2 ENSDARG00000004246 5277 1.618 - 0.868 - - - - - - 0.750 slit homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-010306-3]
61. vipas39 ENSDARG00000103690 280 1.614 - - 0.891 - - - 0.723 - - VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog [Source:ZFIN;Acc:ZDB-GENE-040520-1]
62. pabpn1 ENSDARG00000045373 4876 1.613 - - 0.761 - - - - - 0.852 poly(A) binding protein, nuclear 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2401]
63. zgc:66286 zgc:66286 118947 1.611 0.842 - - - 0.769 - - - -
64. sox5 ENSDARG00000011582 3632 1.611 0.788 - - - - - - - 0.823 SRY (sex determining region Y)-box 5 [Source:ZFIN;Acc:ZDB-GENE-000607-13]
65. arid1b ENSDARG00000092503 1376 1.607 - - 0.863 - - - - - 0.744 AT rich interactive domain 1B (SWI1-like) [Source:ZFIN;Acc:ZDB-GENE-030131-4459]
66. ranbp9 ENSDARG00000061048 2687 1.597 - - 0.872 - - - - - 0.725 RAN binding protein 9 [Source:ZFIN;Acc:ZDB-GENE-021030-5]
67. ndufab1a ENSDARG00000058463, ENSDARG00000112762 11317 1.596 0.764 0.832 - - - - - - - NADH:ubiquinone oxidoreductase subunit AB1a [Source:ZFIN;Acc:ZDB-GENE-040801-1]
68. mrpl17 ENSDARG00000075677 1840 1.593 0.786 0.807 - - - - - - - mitochondrial ribosomal protein L17 [Source:ZFIN;Acc:ZDB-GENE-040912-133]
69. cacng1 cacng1 3118 1.591 0.884 - - - 0.707 - - - -
70. dvl1b ENSDARG00000055552 146 1.59 - - - - - - 0.737 - 0.853 dishevelled segment polarity protein 1b [Source:ZFIN;Acc:ZDB-GENE-071004-1]
71. cct4 ENSDARG00000013475 23959 1.587 0.739 - - - - 0.848 - - - chaperonin containing TCP1, subunit 4 (delta) [Source:ZFIN;Acc:ZDB-GENE-040426-1421]
72. mafg2 mafg2 1041 1.586 0.712 - - - - - - - 0.874
73. actn3b ENSDARG00000001431 15747 1.585 0.842 - - - 0.743 - - - - actinin alpha 3b [Source:ZFIN;Acc:ZDB-GENE-030131-2040]
74. slc39a9 ENSDARG00000070447 971 1.57 - - - - - - 0.706 - 0.864 solute carrier family 39, member 9 [Source:ZFIN;Acc:ZDB-GENE-060314-3]
75. PTGES3L PTGES3L 4801 1.569 0.868 - - - 0.701 - - - -
76. chrna1 ENSDARG00000009021 2931 1.561 0.772 - - - 0.789 - - - - cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
77. tgm2a ENSDARG00000070157 4516 1.556 0.840 - - 0.716 - - - - - transglutaminase 2, C polypeptide A [Source:ZFIN;Acc:ZDB-GENE-040912-78]
78. trdn ENSDARG00000041779 4283 1.554 0.852 - - - 0.702 - - - - triadin [Source:ZFIN;Acc:ZDB-GENE-041014-193]
79. smyhc1 ENSDARG00000099959, ENSDARG00000115916 48476 1.554 0.818 - - - 0.736 - - - - slow myosin heavy chain 1 [Source:ZFIN;Acc:ZDB-GENE-030131-271]
80. tgfbi ENSDARG00000071586 17779 1.549 0.800 - 0.749 - - - - - - transforming growth factor, beta-induced [Source:ZFIN;Acc:ZDB-GENE-030131-73]
81. kifc1 ENSDARG00000001558 6658 1.546 - - 0.717 - - - - - 0.829 kinesin family member C1 [Source:ZFIN;Acc:ZDB-GENE-000208-21]
82. gstm gstm 4064 1.536 0.734 - 0.802 - - - - - -
83. zgc:92518 ENSDARG00000016343 3837 1.535 0.829 - - - 0.706 - - - - zgc:92518 [Source:ZFIN;Acc:ZDB-GENE-040718-53]
84. ZBTB16 ZBTB16 3385 1.535 - - 0.817 - - - - - 0.718
85. lsm6 ENSDARG00000036995 4377 1.527 0.714 - 0.813 - - - - - - LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-040625-50]
86. myhz2 ENSDARG00000012944 69921 1.525 0.820 - - - 0.705 - - - - myosin, heavy polypeptide 2, fast muscle specific [Source:ZFIN;Acc:ZDB-GENE-020604-1]
87. fxr2 ENSDARG00000016260, ENSDARG00000116730 10030 1.523 0.778 - - - 0.745 - - - - fragile X mental retardation, autosomal homolog 2 [Source:ZFIN;Acc:ZDB-GENE-040426-943]
88. frem2a ENSDARG00000076856 11022 1.523 - 0.736 - - - 0.787 - - - Fras1 related extracellular matrix protein 2a [Source:ZFIN;Acc:ZDB-GENE-081119-3]
89. txlnba ENSDARG00000020594 9385 1.522 - - - 0.737 0.785 - - - - taxilin beta a [Source:ZFIN;Acc:ZDB-GENE-030131-322]
90. tpm2 ENSDARG00000104682 36853 1.52 0.725 - - - 0.795 - - - - tropomyosin 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-040625-114]
91. psmc3 ENSDARG00000007141 5592 1.512 0.756 - - - - - - - 0.756 proteasome 26S subunit, ATPase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-666]
92. ttna ttna 101197 1.511 0.745 - - - 0.766 - - - -
93. cnot3a ENSDARG00000007135 3084 1.498 - - 0.779 - - - - - 0.719 CCR4-NOT transcription complex, subunit 3a [Source:ZFIN;Acc:ZDB-GENE-040927-6]
94. myl10 ENSDARG00000062592 101207 1.492 0.720 - - - 0.772 - - - - myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
95. hsp90aa1.1 ENSDARG00000010478 47784 1.491 0.736 - - - 0.755 - - - - heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-990415-94]
96. ntmt1 ENSDARG00000022399 5779 1.489 0.777 - - - 0.712 - - - - N-terminal Xaa-Pro-Lys N-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2055]
97. smyd2b ENSDARG00000005629 8181 1.489 0.786 - - - 0.703 - - - - SET and MYND domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-041001-201]
98. adss ENSDARG00000002071 5497 1.47 0.737 - - 0.733 - - - - - adenylosuccinate synthase [Source:ZFIN;Acc:ZDB-GENE-050417-337]
99. rbfox1l ENSDARG00000021184, ENSDARG00000111700 26249 1.463 0.754 - - - 0.709 - - - - RNA binding fox-1 homolog 1, like [Source:ZFIN;Acc:ZDB-GENE-040923-2]
100. zmynd8 ENSDARG00000007601 405 1 - - - - - 1.000 - - - zinc finger, MYND-type containing 8 [Source:ZFIN;Acc:ZDB-GENE-041119-1]

There are 1338 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA