Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for pbxip1a

Gene Name Gene ID Reads Annotation
pbxip1a ENSDARG00000071015 4960 pre-B-cell leukemia homeobox interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-060503-871]










Genes with expression patterns similar to pbxip1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pbxip1a ENSDARG00000071015 4960 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 pre-B-cell leukemia homeobox interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-060503-871]
2. srl ENSDARG00000104587 11126 5.034 0.851 0.923 0.799 0.781 0.747 - 0.933 - - sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]
3. hhatla ENSDARG00000039051 6598 4.867 0.833 0.937 0.720 - - - 0.929 0.718 0.730 hedgehog acyltransferase like, a [Source:ZFIN;Acc:ZDB-GENE-040426-1865]
4. tnnt2d ENSDARG00000002988 7590 4.766 0.808 0.839 0.731 0.715 - - 0.912 - 0.761 troponin T2d, cardiac [Source:ZFIN;Acc:ZDB-GENE-050626-97]
5. rbfox1l ENSDARG00000021184, ENSDARG00000111700 26249 4.261 0.786 - 0.810 - - 0.981 0.954 - 0.730 RNA binding fox-1 homolog 1, like [Source:ZFIN;Acc:ZDB-GENE-040923-2]
6. C13H10orf71 3489 4.183 0.864 0.927 0.707 0.739 - - 0.946 - - chromosome 13 C10orf71 homolog
7. jph1b ENSDARG00000038826 7416 4.173 - 0.891 0.794 - 0.767 0.993 0.728 - - junctophilin 1b [Source:ZFIN;Acc:ZDB-GENE-060616-389]
8. chrnd ENSDARG00000019342 2728 4.17 0.823 0.934 0.754 0.708 - - 0.951 - - cholinergic receptor, nicotinic, delta (muscle) [Source:ZFIN;Acc:ZDB-GENE-030131-6665]
9. atp1a2a ENSDARG00000010472, ENSDARG00000111818, ENSDARG00000115733 6341 4.119 0.762 0.960 - 0.727 - - 0.926 - 0.744 ATPase Na+/K+ transporting subunit alpha 2 [Source:ZFIN;Acc:ZDB-GENE-001212-6]
10. rp42-pen rp42-pen 3395 4.088 - 0.938 - 0.727 0.745 - 0.930 - 0.748
11. chrna1 ENSDARG00000009021 2931 4.069 0.822 0.901 0.702 0.710 - - 0.934 - - cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
12. prx ENSDARG00000017246 6183 4.027 0.785 0.808 0.738 - - - 0.952 - 0.744 periaxin [Source:ZFIN;Acc:ZDB-GENE-030131-5790]
13. fitm1 ENSDARG00000056464 1759 4.023 0.796 0.890 0.724 0.714 - - 0.899 - - fat storage-inducing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-050306-28]
14. cfl2 ENSDARG00000014106 8051 4.019 0.772 0.931 0.732 - 0.741 - 0.843 - - cofilin 2 (muscle) [Source:ZFIN;Acc:ZDB-GENE-040426-1815]
15. CR847973.1 ENSDARG00000115516 8754 4.016 0.837 0.833 - 0.706 - - 0.924 - 0.716
16. cap2 ENSDARG00000104478 3266 4.002 0.835 0.817 - - 0.700 - 0.931 - 0.719 CAP, adenylate cyclase-associated protein, 2 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1758]
17. mdh1b ENSDARG00000018008 3196 3.957 0.819 0.705 0.764 - - - 0.943 - 0.726 malate dehydrogenase 1B, NAD (soluble) [Source:ZFIN;Acc:ZDB-GENE-060929-384]
18. nexn ENSDARG00000057317 10972 3.9 0.823 - 0.705 0.712 - - 0.930 - 0.730 nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
19. tnnt3a ENSDARG00000030270 112506 3.869 0.835 - 0.768 - 0.741 - 0.767 - 0.758 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
20. klhl31 ENSDARG00000039066 13656 3.856 - - 0.830 0.754 0.735 - 0.780 - 0.757 kelch-like family member 31 [Source:ZFIN;Acc:ZDB-GENE-030131-2052]
21. tmod4 ENSDARG00000020890 17436 3.754 - - 0.746 0.720 0.754 0.761 - - 0.773 tropomodulin 4 (muscle) [Source:ZFIN;Acc:ZDB-GENE-991019-9]
22. ttna ttna 101197 3.744 0.735 - 0.758 - 0.795 0.755 - - 0.701
23. COL22A1 COL22A1 4473 3.635 0.810 0.890 - - - 0.984 0.951 - -
24. palm1a ENSDARG00000026882, ENSDARG00000115356 3425 3.536 0.775 0.901 - - - 0.986 0.874 - - paralemmin 1a [Source:ZFIN;Acc:ZDB-GENE-050417-409]
25. sptb ENSDARG00000030490 7128 3.479 0.867 0.921 0.752 - - - 0.939 - - spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
26. EHBP1L1 EHBP1L1 2500 3.454 0.831 0.897 0.770 - - - 0.956 - -
27. TMPO TMPO 3264 3.435 0.834 0.903 0.764 - - - 0.934 - -
28. sh3bgr ENSDARG00000021633 3498 3.433 0.878 0.920 - - - - 0.935 0.700 - SH3 domain binding glutamate-rich protein [Source:ZFIN;Acc:ZDB-GENE-040801-27]
29. actn3b ENSDARG00000001431 15747 3.432 0.918 0.926 - 0.801 0.787 - - - - actinin alpha 3b [Source:ZFIN;Acc:ZDB-GENE-030131-2040]
30. txlnbb ENSDARG00000076241 6396 3.422 0.838 0.953 - - - - 0.916 - 0.715 taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
31. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 3.42 0.804 0.946 0.733 - - - 0.937 - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
32. ryr1b ENSDARG00000023797 5693 3.397 - 0.951 0.787 - - - 0.944 - 0.715 ryanodine receptor 1b (skeletal) [Source:ZFIN;Acc:ZDB-GENE-070705-417]
33. trdn ENSDARG00000041779 4283 3.378 0.831 0.861 0.774 - - - 0.912 - - triadin [Source:ZFIN;Acc:ZDB-GENE-041014-193]
34. NRAP ENSDARG00000009341 3565 3.365 0.905 0.829 0.704 - - - 0.927 - - nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
35. mybpc2b ENSDARG00000021265 9618 3.358 0.853 0.878 0.733 - - - 0.894 - - myosin binding protein C, fast type b [Source:ZFIN;Acc:ZDB-GENE-050320-80]
36. stac3 ENSDARG00000098883 1765 3.356 0.787 0.881 - - - - 0.885 0.803 - SH3 and cysteine rich domain 3 [Source:ZFIN;Acc:ZDB-GENE-040801-248]
37. eno1a ENSDARG00000022456, ENSDARG00000116458 14401 3.338 0.847 - - 0.810 - 0.730 0.951 - - enolase 1a, (alpha) [Source:ZFIN;Acc:ZDB-GENE-030131-6048]
38. vcl vcl 6667 3.338 0.896 0.898 0.796 - - - - - 0.748
39. MYOM1 MYOM1 3870 3.309 0.838 0.784 0.769 - - - 0.918 - -
40. xirp2a ENSDARG00000071113 7113 3.295 0.787 0.874 - 0.748 - - 0.886 - - xin actin binding repeat containing 2a [Source:ZFIN;Acc:ZDB-GENE-040108-7]
41. myoz2a ENSDARG00000012311 1373 3.291 0.828 0.782 0.711 - - - 0.970 - - myozenin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1880]
42. MUSTN1 MUSTN1 1882 3.29 0.811 0.847 0.730 - - - 0.902 - -
43. si:ch211-114n24.7 si:ch211-114n24.7 2544 3.281 0.778 0.930 0.701 - - - 0.872 - -
44. klhl41b ENSDARG00000006757 10762 3.28 0.874 - 0.726 - - - 0.965 - 0.715 kelch-like family member 41b [Source:ZFIN;Acc:ZDB-GENE-030131-9875]
45. eef2k ENSDARG00000035835 2906 3.278 0.722 0.873 - - - - 0.939 - 0.744 eukaryotic elongation factor 2 kinase [Source:ZFIN;Acc:ZDB-GENE-020916-2]
46. smyd2b ENSDARG00000005629 8181 3.261 0.788 0.948 - - 0.739 - - - 0.786 SET and MYND domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-041001-201]
47. sgcd ENSDARG00000098573 4980 3.258 0.801 - 0.761 - 0.766 - 0.930 - - sarcoglycan, delta (dystrophin-associated glycoprotein) [Source:ZFIN;Acc:ZDB-GENE-030131-3684]
48. pygmb ENSDARG00000013317 5454 3.255 - 0.850 - - - - 0.937 0.746 0.722 phosphorylase, glycogen, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-1206]
49. cmya5 ENSDARG00000061379 1423 3.25 0.832 0.824 - - - - 0.892 0.702 - cardiomyopathy associated 5 [Source:ZFIN;Acc:ZDB-GENE-070630-1]
50. tmem38a ENSDARG00000024047 41883 3.239 0.831 - 0.804 0.828 0.776 - - - - transmembrane protein 38A [Source:ZFIN;Acc:ZDB-GENE-040426-1888]
51. si:ch211-242b18.1 ENSDARG00000054723 2929 3.237 0.734 0.914 0.713 - - - 0.876 - - si:ch211-242b18.1 [Source:ZFIN;Acc:ZDB-GENE-030131-1518]
52. si:ch211-156j16.1 ENSDARG00000092035 7441 3.231 0.858 - - 0.738 - - 0.907 - 0.728 si:ch211-156j16.1 [Source:ZFIN;Acc:ZDB-GENE-030131-4106]
53. SPEG SPEG 4017 3.211 0.782 - 0.752 - 0.746 - 0.931 - -
54. adss ENSDARG00000002071 5497 3.21 0.747 - 0.787 0.742 - - 0.934 - - adenylosuccinate synthase [Source:ZFIN;Acc:ZDB-GENE-050417-337]
55. jph2 ENSDARG00000028625 6706 3.207 0.814 - - - 0.704 - 0.967 - 0.722 junctophilin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9848]
56. tgm2a ENSDARG00000070157 4516 3.19 0.844 - 0.712 - - - 0.918 - 0.716 transglutaminase 2, C polypeptide A [Source:ZFIN;Acc:ZDB-GENE-040912-78]
57. tmem161a ENSDARG00000012790 16094 3.136 0.887 - 0.734 0.760 - - - - 0.755 transmembrane protein 161A [Source:ZFIN;Acc:ZDB-GENE-041111-267]
58. desma ENSDARG00000058656 30292 3.108 0.824 - 0.791 0.748 - 0.745 - - - desmin a [Source:ZFIN;Acc:ZDB-GENE-980526-221]
59. tpma ENSDARG00000033683 752432 3.105 0.833 - 0.760 0.734 - - 0.778 - - alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
60. atp2a1 ENSDARG00000020574 291561 3.099 0.867 - 0.764 0.738 - - 0.730 - - ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
61. cox17 ENSDARG00000069920, ENSDARG00000114117 5591 3.093 - - 0.742 0.760 - - 0.879 - 0.712 cytochrome c oxidase copper chaperone COX17 [Source:ZFIN;Acc:ZDB-GENE-040912-91]
62. SYNPO2 SYNPO2 7382 2.959 - - 0.742 0.740 0.733 - - - 0.744
63. actc1b ENSDARG00000099197 324665 2.92 0.774 - - 0.727 0.706 - - 0.713 - actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
64. pygma ENSDARG00000055518 15972 2.745 0.906 0.936 - - - - 0.903 - - phosphorylase, glycogen, muscle A [Source:ZFIN;Acc:ZDB-GENE-050522-482]
65. dyrk2 ENSDARG00000094646 2163 2.7 - 0.828 - - - 0.989 0.883 - - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-2804]
66. srpk3 ENSDARG00000005916 1546 2.69 0.880 0.919 - - - - 0.891 - - SRSF protein kinase 3 [Source:ZFIN;Acc:ZDB-GENE-101025-2]
67. klhl40a ENSDARG00000039052 2537 2.675 0.835 0.920 - - - - 0.920 - - kelch-like family member 40a [Source:ZFIN;Acc:ZDB-GENE-050916-1]
68. cacng1 cacng1 3118 2.664 0.873 0.901 - - - - 0.890 - -
69. FHOD3_1 FHOD3_1 983 2.655 0.869 0.922 - - - - 0.864 - -
70. glra4a ENSDARG00000006865, ENSDARG00000109562 1117 2.65 0.723 - - - - 0.993 0.934 - - glycine receptor, alpha 4a [Source:ZFIN;Acc:ZDB-GENE-010410-3]
71. usp28 ENSDARG00000008880 1850 2.647 0.801 0.918 - - - - 0.928 - - ubiquitin specific peptidase 28 [Source:ZFIN;Acc:ZDB-GENE-041008-142]
72. myod1 ENSDARG00000030110 6019 2.635 0.815 0.883 - - - - 0.937 - - myogenic differentiation 1 [Source:ZFIN;Acc:ZDB-GENE-980526-561]
73. mybphb ENSDARG00000003081 5208 2.635 - 0.956 - - - - 0.927 - 0.752 myosin binding protein Hb [Source:ZFIN;Acc:ZDB-GENE-030131-9794]
74. PTPLA PTPLA 4044 2.635 0.775 0.927 - - - - 0.933 - -
75. BX294434.1 ENSDARG00000061272 6493 2.633 0.831 0.862 - - - - 0.940 - - solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
76. tnnt2c ENSDARG00000032242 28801 2.633 0.762 - - - - 0.987 0.884 - - troponin T2c, cardiac [Source:ZFIN;Acc:ZDB-GENE-030520-1]
77. MYOT ENSDARG00000076312 1791 2.621 0.816 0.892 - - - - 0.913 - - myotilin [Source:ZFIN;Acc:ZDB-GENE-110411-129]
78. ntmt1 ENSDARG00000022399 5779 2.621 0.782 0.943 - - - - 0.896 - - N-terminal Xaa-Pro-Lys N-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2055]
79. CU633479.5 ENSDARG00000114818 1815 2.618 0.831 0.870 - - - - 0.917 - -
80. ppp1r3cb ENSDARG00000014554 2507 2.618 - 0.714 - - - 0.993 0.911 - - protein phosphatase 1, regulatory subunit 3Cb [Source:ZFIN;Acc:ZDB-GENE-040426-1733]
81. hapln1a ENSDARG00000089769 12334 2.616 0.816 0.891 - - - - 0.909 - - hyaluronan and proteoglycan link protein 1a [Source:ZFIN;Acc:ZDB-GENE-050302-175]
82. zgc:158296 ENSDARG00000070923 3935 2.603 - 0.904 - - - - 0.913 - 0.786 zgc:158296 [Source:ZFIN;Acc:ZDB-GENE-070112-1272]
83. ldb3a ENSDARG00000056322, ENSDARG00000116388 2569 2.602 0.863 0.808 - - - - 0.931 - - LIM domain binding 3a [Source:ZFIN;Acc:ZDB-GENE-040121-6]
84. obsl1b ENSDARG00000077388 2511 2.602 0.795 0.875 - - - - 0.932 - - obscurin-like 1b [Source:ZFIN;Acc:ZDB-GENE-050809-29]
85. CR388002.1 CR388002.1 1998 2.595 0.898 0.920 - - - - 0.777 - -
86. tnw 16679 2.592 - 0.861 - - - 0.781 0.950 - - tenascin W, transcript variant X2
87. murcb murcb 13655 2.591 0.918 - - 0.738 - - 0.935 - -
88. asb5b ENSDARG00000053222 1207 2.589 0.869 0.905 - - - - 0.815 - - ankyrin repeat and SOCS box containing 5b [Source:ZFIN;Acc:ZDB-GENE-050417-271]
89. znf106a ENSDARG00000016651 6049 2.578 0.765 0.912 - - - - 0.901 - - zinc finger protein 106a [Source:ZFIN;Acc:ZDB-GENE-040718-21]
90. zgc:153662 zgc:153662 4604 2.571 0.852 0.859 - - - - 0.860 - -
91. myhc4 ENSDARG00000035438 1322 2.567 0.733 0.921 - - - - 0.913 - - myosin heavy chain 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6206]
92. gypc ENSDARG00000041546 1487 2.567 0.787 0.900 - - - - 0.880 - - glycophorin C (Gerbich blood group) [Source:ZFIN;Acc:ZDB-GENE-030131-7930]
93. PHB2 PHB2 3755 2.564 0.802 0.914 - - - - 0.848 - -
94. six1b ENSDARG00000026473 1908 2.561 0.773 0.835 - - - - 0.953 - - SIX homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2308]
95. alpk3a ENSDARG00000078989 1992 2.558 - 0.922 - - 0.732 - 0.904 - - alpha-kinase 3a [Source:ZFIN;Acc:ZDB-GENE-050419-48]
96. cyp4t8 ENSDARG00000004964, ENSDARG00000116412 1111 2.555 0.887 0.931 - - - - 0.737 - - cytochrome P450, family 4, subfamily T, polypeptide 8 [Source:ZFIN;Acc:ZDB-GENE-031219-3]
97. eya1 ENSDARG00000014259, ENSDARG00000116267 5111 2.551 0.820 0.919 - - - - 0.812 - - EYA transcriptional coactivator and phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-990712-18]
98. limch1a ENSDARG00000074275 2981 2.551 0.720 0.882 - - - - 0.949 - - LIM and calponin homology domains 1a [Source:ZFIN;Acc:ZDB-GENE-090312-153]
99. pvalb4 ENSDARG00000024433 35736 2.546 0.916 - - 0.718 - - 0.912 - - parvalbumin 4 [Source:ZFIN;Acc:ZDB-GENE-040625-48]
100. trim55a ENSDARG00000029596 2858 2.545 0.742 0.888 - - - - 0.915 - - tripartite motif containing 55a [Source:ZFIN;Acc:ZDB-GENE-040718-50]

There are 1910 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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