Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for pbx4

Gene Name Gene ID Reads Annotation
pbx4 ENSDARG00000052150 35676 pre-B-cell leukemia transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-000201-18]










Genes with expression patterns similar to pbx4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pbx4 ENSDARG00000052150 35676 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 pre-B-cell leukemia transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-000201-18]
2. acin1a ENSDARG00000054290 14023 3.348 - - - - 0.708 0.954 0.885 - 0.801 apoptotic chromatin condensation inducer 1a [Source:ZFIN;Acc:ZDB-GENE-030616-583]
3. uba1 ENSDARG00000037559 11579 2.557 - 0.778 - - - - 0.902 - 0.877 ubiquitin-like modifier activating enzyme 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2009]
4. ssbp4 ENSDARG00000056483 10196 2.504 - 0.852 - - - - 0.877 0.775 - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
5. hmgb3a ENSDARG00000056725 15668 2.448 0.773 0.789 - - - - 0.886 - - high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
6. hmgn3 ENSDARG00000036754, ENSDARG00000116728 11573 2.445 - 0.713 - - - 0.901 0.831 - - high mobility group nucleosomal binding domain 3 [Source:ZFIN;Acc:ZDB-GENE-041114-180]
7. CABZ01070258.1 ENSDARG00000105687 3643 2.432 0.756 - - - - 0.935 0.741 - -
8. stmn1a ENSDARG00000004169 21169 2.415 0.860 0.787 - - - - 0.768 - - stathmin 1a [Source:ZFIN;Acc:ZDB-GENE-031006-14]
9. hnrnpa0l ENSDARG00000036161, ENSDARG00000076380, ENSDARG00000114889 72444 2.407 0.803 - - - - 0.872 - 0.732 - heterogeneous nuclear ribonucleoprotein A0, like [Source:ZFIN;Acc:ZDB-GENE-030131-618]
10. FP016176.1 FP016176.1 7030 2.389 0.718 - - 0.800 - - 0.871 - -
11. pl10 pl10 10795 2.38 - 0.767 - - - - 0.816 - 0.797
12. ANKRD11 ENSDARG00000051886 10024 2.371 0.714 0.791 - - - - 0.866 - - ankyrin repeat domain 11 [Source:ZFIN;Acc:ZDB-GENE-030131-3932]
13. sumo3a ENSDARG00000028119 13447 2.37 0.751 - - - - - 0.858 0.761 - small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
14. clvs2 ENSDARG00000053122 1390 2.315 0.704 - - - - 0.910 0.701 - - clavesin 2 [Source:ZFIN;Acc:ZDB-GENE-041014-313]
15. CABZ01111990.1 CABZ01111990.1 4374 2.313 0.749 - - 0.794 - - 0.770 - -
16. h2afvb ENSDARG00000116491 35692 2.31 0.849 0.746 - - - - - 0.715 - H2A histone family, member Vb [Source:ZFIN;Acc:ZDB-GENE-050506-24]
17. scrt2 ENSDARG00000056175 4331 2.272 0.756 - - - - - 0.717 - 0.799 scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
18. ppp2r2a ppp2r2a 5785 2.254 - 0.777 - - - - 0.749 - 0.728
19. npm1b ENSDARG00000037675 5448 2.236 0.755 - - - 0.778 - 0.703 - - nucleophosmin 1b [Source:ZFIN;Acc:ZDB-GENE-080723-7]
20. tuba1c ENSDARG00000055216 8384 2.221 0.725 - - - - - 0.737 0.759 - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
21. hn1b hn1b 7325 2.22 0.748 0.749 - - - - 0.723 - -
22. msi1 ENSDARG00000010710 2634 2.152 0.724 - - - 0.700 - 0.728 - - musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
23. cdc34b ENSDARG00000012627 3879 2.152 - 0.704 - - - - 0.733 0.715 - cell division cycle 34 homolog (S. cerevisiae) b [Source:ZFIN;Acc:ZDB-GENE-040718-439]
24. anp32a ENSDARG00000006487 28249 2.137 0.714 0.710 - - - - 0.713 - - acidic (leucine-rich) nuclear phosphoprotein 32 family, member A [Source:ZFIN;Acc:ZDB-GENE-030131-7850]
25. hnrnpm ENSDARG00000061735 19428 1.768 - 0.807 - - - 0.961 - - - heterogeneous nuclear ribonucleoprotein M [Source:ZFIN;Acc:ZDB-GENE-030131-6898]
26. h3f3a 66671 1.761 0.852 - - - - - 0.909 - - H3 histone, family 3A, transcript variant X1
27. ier5 ENSDARG00000009881, ENSDARG00000111680 11432 1.719 - 0.847 - - - - 0.872 - - immediate early response 5 [Source:ZFIN;Acc:ZDB-GENE-030616-127]
28. hmgb2b ENSDARG00000053990 11519 1.717 0.791 - - - - - 0.926 - - high mobility group box 2b [Source:ZFIN;Acc:ZDB-GENE-040912-122]
29. psmb7 ENSDARG00000037962 11542 1.694 - 0.794 - - - 0.900 - - - proteasome subunit beta 7 [Source:ZFIN;Acc:ZDB-GENE-001208-4]
30. tardbp ENSDARG00000040031, ENSDARG00000115667 13815 1.692 - - - - 0.843 - 0.849 - - TAR DNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-3777]
31. hoxa9b ENSDARG00000056819 3081 1.687 0.812 - - - - - 0.875 - - homeobox A9b [Source:ZFIN;Acc:ZDB-GENE-000823-2]
32. atrx ENSDARG00000042236, ENSDARG00000112921, ENSDARG00000116878 7922 1.681 - - - - - - 0.847 - 0.834 alpha thalassemia/mental retardation syndrome X-linked homolog (human) [Source:ZFIN;Acc:ZDB-GENE-030912-11]
33. khsrp ENSDARG00000026489 15738 1.681 0.820 - - - - - 0.861 - - KH-type splicing regulatory protein [Source:ZFIN;Acc:ZDB-GENE-030131-4357]
34. tubb4b ENSDARG00000002344 30333 1.677 0.734 - - - - 0.943 - - - tubulin, beta 4B class IVb [Source:ZFIN;Acc:ZDB-GENE-030131-8625]
35. ewsr1a ENSDARG00000020258, ENSDARG00000113252 11221 1.677 - - - 0.794 - - 0.883 - - EWS RNA-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2317]
36. pcp4a ENSDARG00000053130 1024 1.664 - - - - - 0.928 0.736 - - Purkinje cell protein 4a [Source:ZFIN;Acc:ZDB-GENE-031118-105]
37. prdx3 ENSDARG00000032102, ENSDARG00000114240 10034 1.663 - - - 0.779 - 0.884 - - - peroxiredoxin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-18]
38. Sep-06 Sep-06 5465 1.66 - - - - - 0.908 0.752 - -
39. hadhb ENSDARG00000102055 9700 1.659 - 0.804 - - - 0.855 - - - hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta [Source:ZFIN;Acc:ZDB-GENE-030131-8550]
40. hmgb1b ENSDARG00000030479 10398 1.645 - 0.774 - - - - 0.871 - - high mobility group box 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8480]
41. zgc:162356 zgc:162356 5115 1.64 - 0.765 - - - 0.875 - - -
42. snrpf ENSDARG00000105037 10241 1.638 - 0.801 - - - - 0.837 - - small nuclear ribonucleoprotein polypeptide F [Source:ZFIN;Acc:ZDB-GENE-040930-9]
43. ube2i ube2i 13024 1.633 - - - - 0.810 - 0.823 - -
44. tmpob ENSDARG00000022978 8121 1.633 0.777 - - - - - 0.856 - - thymopoietin b [Source:ZFIN;Acc:ZDB-GENE-050522-8]
45. elof1 ENSDARG00000099453 6176 1.632 0.788 - - - - - 0.844 - - ELF1 homolog, elongation factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1385]
46. hnrnpub ENSDARG00000004735 16496 1.631 0.799 - - - - - 0.832 - - heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
47. stag2b ENSDARG00000053668, ENSDARG00000109728 7193 1.63 - - - - - 0.891 0.739 - - stromal antigen 2b [Source:ZFIN;Acc:ZDB-GENE-030131-2785]
48. TNRC6A ENSDARG00000079688 14433 1.625 - - - - 0.758 - 0.867 - - trinucleotide repeat containing 6a [Source:ZFIN;Acc:ZDB-GENE-030131-2519]
49. hoxb9a ENSDARG00000056023 11856 1.621 0.814 - - - - - 0.807 - - homeobox B9a [Source:ZFIN;Acc:ZDB-GENE-990415-109]
50. pafah1b1a ENSDARG00000032013 3183 1.618 - 0.735 - - - 0.883 - - - platelet-activating factor acetylhydrolase 1b, regulatory subunit 1a [Source:ZFIN;Acc:ZDB-GENE-040116-2]
51. dbx1a ENSDARG00000086393 3161 1.617 - - - - 0.841 - - - 0.776 developing brain homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-000128-8]
52. whsc1l1 8544 1.616 0.789 - - - - - 0.827 - - Wolf-Hirschhorn syndrome candidate 1-like 1, transcript variant X2
53. srsf3a ENSDARG00000025397, ENSDARG00000100815 11622 1.603 - - - 0.789 - - 0.814 - - serine/arginine-rich splicing factor 3a [Source:ZFIN;Acc:ZDB-GENE-030616-631]
54. UBE2QL1 ENSDARG00000079276 3474 1.603 0.769 - - - - - 0.834 - - ubiquitin-conjugating enzyme E2Q family-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8137]
55. zgc:123194 zgc:123194 69174 1.603 0.778 - - - - 0.825 - - -
56. FP085405.1 FP085405.1 5189 1.595 0.759 - - - - - 0.836 - -
57. btg2 ENSDARG00000020298 6616 1.594 - 0.796 - - - - 0.798 - - B-cell translocation gene 2 [Source:ZFIN;Acc:ZDB-GENE-000210-15]
58. appb ENSDARG00000055543, ENSDARG00000109552 4461 1.594 0.779 - - - - - 0.815 - - amyloid beta (A4) precursor protein b [Source:ZFIN;Acc:ZDB-GENE-020220-1]
59. ZFHX3 ENSDARG00000103057 7759 1.593 0.815 - - - - - 0.778 - - zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]
60. smarca5 ENSDARG00000052348 15433 1.591 - 0.769 - - - - 0.822 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:ZFIN;Acc:ZDB-GENE-021125-1]
61. si:dkeyp-86f7.3 si:dkeyp-86f7.3 92941 1.591 0.830 - - - - - - 0.761 -
62. SERBP1 SERBP1 9276 1.591 - 0.777 - - - - 0.814 - -
63. si:ch211-138k19.2 si:ch211-138k19.2 398 1.589 - - - - - 0.881 0.708 - -
64. kif22 ENSDARG00000102624 3694 1.588 - 0.721 - - - - 0.867 - - kinesin family member 22 [Source:ZFIN;Acc:ZDB-GENE-080204-34]
65. smarca4 smarca4 9726 1.586 0.714 - - - - - 0.872 - -
66. col4a6 ENSDARG00000052061 8636 1.585 - 0.796 - - - - 0.789 - - collagen, type IV, alpha 6 [Source:ZFIN;Acc:ZDB-GENE-101001-2]
67. CWC15 ENSDARG00000013382 8969 1.582 - 0.797 - 0.785 - - - - - CWC15 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040625-10]
68. ddx39aa ENSDARG00000006225, ENSDARG00000116665 6675 1.581 - 0.804 - - - - 0.777 - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Aa [Source:ZFIN;Acc:ZDB-GENE-030131-4275]
69. aspm ENSDARG00000103754 5708 1.58 0.777 - - - - - 0.803 - - abnormal spindle microtubule assembly [Source:ZFIN;Acc:ZDB-GENE-050208-620]
70. pnisr ENSDARG00000069855, ENSDARG00000116449 3465 1.58 - 0.709 - - - - 0.871 - - PNN-interacting serine/arginine-rich protein [Source:ZFIN;Acc:ZDB-GENE-030131-362]
71. rbm4.3 ENSDARG00000022129 28571 1.576 0.761 - - - - - - 0.815 - RNA binding motif protein 4.3 [Source:ZFIN;Acc:ZDB-GENE-040426-1938]
72. ELOVL4 ELOVL4 3026 1.574 0.780 - - - - - 0.794 - -
73. MATR3 MATR3 3962 1.574 - 0.814 - - - - 0.760 - -
74. brd3b ENSDARG00000100129 6387 1.57 - 0.714 - - - - 0.856 - - bromodomain containing 3b [Source:ZFIN;Acc:ZDB-GENE-030131-5316]
75. CBFA2T3 ENSDARG00000079012 6799 1.568 - - - - - - 0.735 - 0.833 core-binding factor, runt domain, alpha subunit 2; translocated to, 3 [Source:ZFIN;Acc:ZDB-GENE-070209-2]
76. tuba2 ENSDARG00000045014 1490 1.567 0.761 - - - - - 0.806 - - tubulin, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1970]
77. setb ENSDARG00000003920 21788 1.564 - - - - - - 0.838 0.726 - SET nuclear proto-oncogene b [Source:ZFIN;Acc:ZDB-GENE-030131-433]
78. RNF38 ENSDARG00000062055 3901 1.563 - - - - - - 0.803 - 0.760 ring finger protein 38 [Source:ZFIN;Acc:ZDB-GENE-030131-8693]
79. AGO1 ENSDARG00000092644 4521 1.563 0.776 - - - - - 0.787 - - argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]
80. vdac1 ENSDARG00000045132 8051 1.562 0.823 - - - - - 0.739 - - voltage-dependent anion channel 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6514]
81. si:dkey-253d23.10 7602 1.558 - 0.787 - - 0.771 - - - - si:dkey-253d23.10, transcript variant X4
82. lypla2 ENSDARG00000053656 8971 1.557 - 0.783 - - - - 0.774 - - lysophospholipase II [Source:ZFIN;Acc:ZDB-GENE-040426-1715]
83. ckbb ENSDARG00000043257 3503 1.557 0.748 - - - - - 0.809 - - creatine kinase, brain b [Source:ZFIN;Acc:ZDB-GENE-020103-2]
84. myef2 ENSDARG00000059398 6050 1.555 - 0.756 - - - - 0.799 - - myelin expression factor 2 [Source:ZFIN;Acc:ZDB-GENE-051120-114]
85. kdm1a ENSDARG00000060679 6152 1.555 0.748 - - - - - 0.807 - - lysine (K)-specific demethylase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7828]
86. rufy3 ENSDARG00000029692 3031 1.553 0.757 - - - - - 0.796 - - RUN and FYVE domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050327-58]
87. ube2e1 ENSDARG00000116649 10656 1.552 - 0.778 - - - - - - 0.774 ubiquitin-conjugating enzyme E2E 1 [Source:ZFIN;Acc:ZDB-GENE-071004-16]
88. CU571336.2 CU571336.2 2690 1.551 - 0.741 - - - - 0.810 - -
89. mtss1l mtss1l 2494 1.551 0.750 - - - - - 0.801 - -
90. si:ch73-46j18.5 ENSDARG00000092467 6002 1.551 0.735 - - - - - 0.816 - - si:ch73-46j18.5 [Source:ZFIN;Acc:ZDB-GENE-030131-7892]
91. dad1 ENSDARG00000102105 14788 1.55 - 0.808 - - - 0.742 - - - defender against cell death 1 [Source:ZFIN;Acc:ZDB-GENE-060503-233]
92. mdkb ENSDARG00000020708 5393 1.549 0.749 - - - - - 0.800 - - midkine b [Source:ZFIN;Acc:ZDB-GENE-010131-6]
93. tubb5 ENSDARG00000037997 18691 1.546 0.726 - - - - - 0.820 - - tubulin, beta 5 [Source:ZFIN;Acc:ZDB-GENE-031110-4]
94. ddx39ab ENSDARG00000015111 11619 1.545 0.706 - - - - - 0.839 - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Ab [Source:ZFIN;Acc:ZDB-GENE-040426-2902]
95. ing4 ENSDARG00000030716 5908 1.544 - 0.838 - - - - - 0.706 - inhibitor of growth family, member 4 [Source:ZFIN;Acc:ZDB-GENE-050522-47]
96. gnao1a ENSDARG00000016676 8184 1.544 0.722 - - - - - 0.822 - - guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, a [Source:ZFIN;Acc:ZDB-GENE-040426-1757]
97. zgc:77262 ENSDARG00000044545 5563 1.543 - 0.705 - - - - 0.838 - - zgc:77262 [Source:ZFIN;Acc:ZDB-GENE-040426-1811]
98. ptgr1 ENSDARG00000024877, ENSDARG00000115676 4312 1.542 0.797 - - - - - 0.745 - - prostaglandin reductase 1 [Source:ZFIN;Acc:ZDB-GENE-041212-80]
99. ppp3ca ENSDARG00000004988 615 1.542 0.746 - - - - - 0.796 - - protein phosphatase 3, catalytic subunit, alpha isozyme [Source:ZFIN;Acc:ZDB-GENE-091113-24]
100. ephb3a ENSDARG00000031548 1872 1.542 - - - - 0.832 - 0.710 - - eph receptor B3a [Source:ZFIN;Acc:ZDB-GENE-990415-60]

There are 1304 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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