Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for pbx3a

Gene Name Gene ID Reads Annotation
pbx3a ENSDARG00000089262 97 pre-B-cell leukemia homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-031218-1]










Genes with expression patterns similar to pbx3a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pbx3a ENSDARG00000089262 97 8 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 pre-B-cell leukemia homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-031218-1]
2. gpr98 gpr98 717 2.44 - - - - - 0.747 0.948 0.745 -
3. AL935029.1 AL935029.1 514 2.426 - - - - - 0.860 0.814 0.752 -
4. phactr3a ENSDARG00000058243 150 2.322 - - - - 0.760 0.782 0.780 - - phosphatase and actin regulator 3a [Source:ZFIN;Acc:ZDB-GENE-080220-4]
5. zgc:174563_1 zgc:174563_1 146 2.188 - - - - 0.723 0.714 0.751 - -
6. her4.2 ENSDARG00000056729, ENSDARG00000094426 289 1.857 - - - - - 0.926 0.931 - - hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
7. zgc:100906 ENSDARG00000033599 344 1.846 - - - - - 0.875 0.971 - - zgc:100906 [Source:ZFIN;Acc:ZDB-GENE-040801-20]
8. CDK5R1 CDK5R1 562 1.837 - - - - - 0.897 0.940 - -
9. SSX2IP SSX2IP 316 1.836 - - - - - 0.904 0.932 - -
10. mnx2b ENSDARG00000030350 484 1.823 - - - - - 0.885 0.938 - - motor neuron and pancreas homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-040415-2]
11. rheb ENSDARG00000090213 1432 1.805 - - - - - 0.915 0.890 - - Ras homolog, mTORC1 binding [Source:ZFIN;Acc:ZDB-GENE-040426-1690]
12. C8H1orf106 C8H1orf106 2690 1.802 - - - - - 0.938 0.864 - -
13. pou3f2b ENSDARG00000076262, ENSDARG00000112713 2439 1.8 - - - - - 0.927 0.873 - - POU class 3 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-370]
14. BX511121.1 ENSDARG00000029997 1774 1.791 - - - - - 0.912 0.879 - -
15. her15.1 ENSDARG00000054560, ENSDARG00000054562 1500 1.785 - - - - - 0.890 0.895 - - hairy and enhancer of split-related 15, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030707-2]
16. lgi1a ENSDARG00000020493 1218 1.782 - - - - - 0.839 0.943 - - leucine-rich, glioma inactivated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1731]
17. nhlh2 ENSDARG00000025495 1860 1.781 - - - - - 0.943 0.838 - - nescient helix loop helix 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1809]
18. SMARCAD1 SMARCAD1 104 1.776 0.869 - - - - - 0.907 - -
19. si:ch73-265d7.2 ENSDARG00000116713 2142 1.771 - - - - - 0.841 0.930 - - si:ch73-265d7.2 [Source:ZFIN;Acc:ZDB-GENE-100922-146]
20. ctnnd2b ENSDARG00000003779 964 1.766 - - - - - 0.947 0.819 - - catenin (cadherin-associated protein), delta 2b [Source:ZFIN;Acc:ZDB-GENE-070912-532]
21. cox5aa ENSDARG00000088383 21 1.764 0.869 - - - 0.895 - - - - cytochrome c oxidase subunit 5Aa [Source:ZFIN;Acc:ZDB-GENE-050522-133]
22. evlb ENSDARG00000099720 245 1.763 - - - - - 0.959 0.804 - - Enah/Vasp-like b [Source:ZFIN;Acc:ZDB-GENE-040426-1804]
23. lgi2b ENSDARG00000069701, ENSDARG00000116343 66 1.759 - - - - - 0.824 0.935 - - leucine-rich repeat LGI family, member 2b [Source:ZFIN;Acc:ZDB-GENE-060217-3]
24. INSM2 ENSDARG00000020655 122 1.754 - - - - - - 0.933 0.821 - INSM transcriptional repressor 2 [Source:HGNC Symbol;Acc:HGNC:17539]
25. elavl3 ENSDARG00000014420 8644 1.751 - - - - - 0.969 0.782 - - ELAV like neuron-specific RNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-980526-76]
26. her4.3 ENSDARG00000070770 613 1.75 - - - - - 0.921 0.829 - - hairy-related 4, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-081030-7]
27. her8.2 ENSDARG00000069675 315 1.743 - - - - - 0.865 0.878 - - hairy-related 8.2 [Source:ZFIN;Acc:ZDB-GENE-060815-4]
28. epb41a ENSDARG00000099283 860 1.737 - - - - - 0.856 0.881 - - erythrocyte membrane protein band 4.1a [Source:ZFIN;Acc:ZDB-GENE-070705-81]
29. vim ENSDARG00000010008 3551 1.736 - - - - - 0.837 0.899 - - vimentin [Source:ZFIN;Acc:ZDB-GENE-011212-3]
30. pkd2l1 ENSDARG00000022503 372 1.725 - - - - - 0.756 0.969 - - polycystic kidney disease 2-like 1 [Source:ZFIN;Acc:ZDB-GENE-030616-558]
31. nes ENSDARG00000088805 2710 1.721 - - - - - 0.872 0.849 - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
32. hectd2 ENSDARG00000061194 559 1.717 - - - - - 0.804 0.913 - - HECT domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-100405-3]
33. slc12a5b ENSDARG00000078187 329 1.712 - - - - - 0.852 0.860 - - solute carrier family 12 (potassium/chloride transporter), member 5b [Source:ZFIN;Acc:ZDB-GENE-080707-1]
34. cacng2a ENSDARG00000032565 99 1.71 - - - - - 0.791 - 0.919 - calcium channel, voltage-dependent, gamma subunit 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1401]
35. ptprnb ENSDARG00000077047 2743 1.704 - - - - - 0.793 0.911 - - protein tyrosine phosphatase, receptor type, Nb [Source:ZFIN;Acc:ZDB-GENE-100505-1]
36. tmem240 tmem240 180 1.704 - - - - - 0.829 0.875 - -
37. nfasca ENSDARG00000061099, ENSDARG00000109524 275 1.703 - - - - - 0.724 0.979 - - neurofascin homolog (chicken) a [Source:ZFIN;Acc:ZDB-GENE-080229-6]
38. TMEM55B_1 TMEM55B_1 495 1.703 - - - - - 0.843 0.860 - -
39. sst1.1 ENSDARG00000040799 677 1.701 - - - - - 0.777 0.924 - - somatostatin 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4743]
40. sv2c ENSDARG00000059997 592 1.701 - - - - - 0.831 0.870 - - synaptic vesicle glycoprotein 2C [Source:ZFIN;Acc:ZDB-GENE-060526-233]
41. dpysl5b ENSDARG00000059311 600 1.699 - - - - - 0.952 0.747 - - dihydropyrimidinase-like 5b [Source:ZFIN;Acc:ZDB-GENE-050720-4]
42. si:ch211-26b3.4 ENSDARG00000075491 50 1.695 - - - - - 0.737 0.958 - - si:ch211-26b3.4 [Source:ZFIN;Acc:ZDB-GENE-081104-60]
43. socs7_2 ENSDARG00000077018, ENSDARG00000114903, ENSDARG00000115097 66 1.694 - - - - - 0.715 0.979 - - suppressor of cytokine signaling 7 [Source:ZFIN;Acc:ZDB-GENE-080204-125]
44. dync1i1 ENSDARG00000060948 554 1.694 - - - - - 0.852 0.842 - - dynein, cytoplasmic 1, intermediate chain 1 [Source:ZFIN;Acc:ZDB-GENE-061215-62]
45. si:dkey-29j8.5 si:dkey-29j8.5 9 1.692 - - 0.713 - - - 0.979 - -
46. nova2 ENSDARG00000017673 7685 1.69 - - - - - 0.882 0.808 - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
47. calca ENSDARG00000056590 150 1.69 - - - - - 0.930 0.760 - - calcitonin/calcitonin-related polypeptide, alpha [Source:ZFIN;Acc:ZDB-GENE-040718-173]
48. neurog1 ENSDARG00000056130 3924 1.686 - - - - - 0.918 0.768 - - neurogenin 1 [Source:ZFIN;Acc:ZDB-GENE-990415-174]
49. mapk11 ENSDARG00000045836 846 1.685 - - - - - 0.882 0.803 - - mitogen-activated protein kinase 11 [Source:ZFIN;Acc:ZDB-GENE-040625-75]
50. gfra3 ENSDARG00000087704 122 1.684 - - - - - 0.705 0.979 - - GDNF family receptor alpha 3 [Source:ZFIN;Acc:ZDB-GENE-110512-1]
51. prdm8 ENSDARG00000025017 370 1.684 - - - - - 0.838 0.846 - - PR domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2747]
52. mnx2a ENSDARG00000042106 939 1.683 - - - - - 0.770 0.913 - - motor neuron and pancreas homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-040415-1]
53. nptnb ENSDARG00000043864 165 1.683 - - - - - 0.705 0.978 - - neuroplastin b [Source:ZFIN;Acc:ZDB-GENE-040426-1821]
54. gpr124 gpr124 25 1.682 - - - 0.747 - - 0.935 - -
55. ADAMTS3 ENSDARG00000060127 2839 1.675 - - - - - 0.758 0.917 - - ADAM metallopeptidase with thrombospondin type 1 motif, 3 [Source:ZFIN;Acc:ZDB-GENE-110223-1]
56. ptprna ENSDARG00000058646 1327 1.67 - - - - - 0.840 0.830 - - protein tyrosine phosphatase, receptor type, Na [Source:ZFIN;Acc:ZDB-GENE-030131-3511]
57. chrna6 ENSDARG00000055559 60 1.668 - - - - - 0.725 0.943 - - cholinergic receptor, nicotinic, alpha 6 [Source:ZFIN;Acc:ZDB-GENE-090312-91]
58. kif5c ENSDARG00000076027 424 1.666 - - - - - 0.907 0.759 - - kinesin family member 5C [Source:ZFIN;Acc:ZDB-GENE-081105-14]
59. clu ENSDARG00000010434 498 1.663 0.728 - - - - - 0.935 - - clusterin [Source:ZFIN;Acc:ZDB-GENE-040426-1774]
60. FAT1 FAT1 689 1.662 0.869 - - - - 0.793 - - -
61. pnx ENSDARG00000025899 25 1.66 0.869 - - 0.791 - - - - - posterior neuron-specific homeobox [Source:ZFIN;Acc:ZDB-GENE-030328-42]
62. nkx6.1 ENSDARG00000022569 3779 1.66 - - - - - 0.745 0.915 - - NK6 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040718-178]
63. fabp7a ENSDARG00000007697 5211 1.66 - - - - - 0.843 0.817 - - fatty acid binding protein 7, brain, a [Source:ZFIN;Acc:ZDB-GENE-000627-1]
64. chrna5 ENSDARG00000003420 137 1.659 - - - - 0.732 0.927 - - - cholinergic receptor, nicotinic, alpha 5 [Source:ZFIN;Acc:ZDB-GENE-050417-440]
65. si:ch211-224b1.4 si:ch211-224b1.4 29 1.659 0.945 - - - 0.714 - - - -
66. neurod neurod 1189 1.658 - - - - - 0.782 0.876 - -
67. si:dkey-169l5.3 si:dkey-169l5.3 239 1.655 - - - - - 0.906 0.749 - -
68. CABZ01029738.1 CABZ01029738.1 327 1.655 - - - - - 0.884 0.771 - -
69. zgc:113531 ENSDARG00000038794 2063 1.654 - - - - - 0.707 0.947 - - zgc:113531 [Source:ZFIN;Acc:ZDB-GENE-050320-52]
70. lhx1b ENSDARG00000007944, ENSDARG00000111635 254 1.651 - - - - - 0.942 0.709 - - LIM homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-980526-116]
71. nlgn2b ENSDARG00000079251, ENSDARG00000111576 179 1.65 - - - - - 0.762 0.888 - - neuroligin 2b [Source:ZFIN;Acc:ZDB-GENE-090918-3]
72. tmem35 ENSDARG00000052567 5685 1.65 - - - - - 0.852 0.798 - - transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
73. prok1 ENSDARG00000073948, ENSDARG00000114411 26 1.648 - - - - - 0.836 0.812 - - prokineticin 1 [Source:ZFIN;Acc:ZDB-GENE-070928-34]
74. AGO1 ENSDARG00000092644 4521 1.645 - - - - - 0.903 0.742 - - argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]
75. fbxo41 ENSDARG00000078908 95 1.645 - - - - - 0.856 0.789 - - F-box protein 41 [Source:ZFIN;Acc:ZDB-GENE-090313-350]
76. abcg4a ENSDARG00000061047 56 1.645 0.869 - - - - - 0.776 - - ATP-binding cassette, sub-family G (WHITE), member 4a [Source:ZFIN;Acc:ZDB-GENE-050517-39]
77. APBB3 ENSDARG00000053771 654 1.644 - - - - - 0.936 0.708 - - amyloid beta (A4) precursor protein-binding, family B, member 3 [Source:ZFIN;Acc:ZDB-GENE-140106-53]
78. chrm3a ENSDARG00000071091 72 1.643 - - - - - 0.793 0.850 - - cholinergic receptor, muscarinic 3a [Source:ZFIN;Acc:ZDB-GENE-090410-4]
79. nacad ENSDARG00000012347 1268 1.643 - - - - - 0.855 0.788 - - NAC alpha domain containing [Source:ZFIN;Acc:ZDB-GENE-091020-7]
80. chat chat 463 1.641 - - - - - 0.876 0.765 - -
81. lrrtm1 ENSDARG00000052713 1041 1.64 - - - - - 0.876 0.764 - - leucine rich repeat transmembrane neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-050506-80]
82. fzd9b ENSDARG00000014673, ENSDARG00000116739 155 1.64 - - - - - 0.800 0.840 - - frizzled class receptor 9b [Source:ZFIN;Acc:ZDB-GENE-000906-4]
83. tmtc2 tmtc2 798 1.638 - - - - - 0.723 0.915 - -
84. CR538726.1 ENSDARG00000097179 321 1.637 - - - - - 0.784 0.853 - -
85. wnt4b ENSDARG00000040159, ENSDARG00000115606 490 1.636 0.705 - - - - - 0.931 - - wingless-type MMTV integration site family, member 4b [Source:ZFIN;Acc:ZDB-GENE-000411-1]
86. vgf ENSDARG00000105529 247 1.632 - - - - - 0.833 0.799 - - VGF nerve growth factor inducible [Source:ZFIN;Acc:ZDB-GENE-121009-2]
87. LRFN5_1 LRFN5_1 96 1.632 - - - - - 0.818 0.814 - -
88. rhbdl3 ENSDARG00000105190, ENSDARG00000112687, ENSDARG00000116222 977 1.631 - - - - - 0.757 0.874 - - rhomboid, veinlet-like 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050417-2]
89. CABZ01080599.2 CABZ01080599.2 192 1.631 - - - - - 0.872 0.759 - -
90. fhdc1 ENSDARG00000074812 934 1.628 - - - - - - 0.737 0.891 - FH2 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040826-4]
91. pou2f2a ENSDARG00000019658, ENSDARG00000036816 2027 1.628 - - - - - 0.817 0.811 - - POU class 2 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-060310-2]
92. ATP6AP1L ATP6AP1L 164 1.628 - - - - - 0.835 0.793 - -
93. tmie ENSDARG00000069423 305 1.626 - - - - - 0.883 0.743 - - transmembrane inner ear [Source:ZFIN;Acc:ZDB-GENE-061207-9]
94. ntn1a ENSDARG00000105112, ENSDARG00000111684 2553 1.625 - - - - - 0.783 0.842 - - netrin 1a [Source:ZFIN;Acc:ZDB-GENE-990415-169]
95. s1pr1 ENSDARG00000042690, ENSDARG00000113842, ENSDARG00000116038 2510 1.625 - - - - - 0.885 0.740 - - sphingosine-1-phosphate receptor 1 [Source:ZFIN;Acc:ZDB-GENE-001228-2]
96. wnt4a ENSDARG00000071208 1157 1.624 - - - - - 0.717 0.907 - - wingless-type MMTV integration site family, member 4a [Source:ZFIN;Acc:ZDB-GENE-980526-352]
97. PPP1R9B PPP1R9B 855 1.623 - - - - - 0.815 0.808 - -
98. b4galt2 ENSDARG00000077994 480 1.621 - - - - - 0.821 0.800 - - UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-070912-258]
99. lhx4 ENSDARG00000039458 328 1.621 - - - - - 0.805 0.816 - - LIM homeobox 4 [Source:ZFIN;Acc:ZDB-GENE-060728-1]
100. sox19b ENSDARG00000040266 532 1.617 - - - - - 0.869 0.748 - - SRY (sex determining region Y)-box 19b [Source:ZFIN;Acc:ZDB-GENE-010111-1]

There are 1636 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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