Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for pax7b

Gene Name Gene ID Reads Annotation
pax7b ENSDARG00000070818 282 paired box 7b [Source:ZFIN;Acc:ZDB-GENE-080917-54]










Genes with expression patterns similar to pax7b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pax7b ENSDARG00000070818 282 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 paired box 7b [Source:ZFIN;Acc:ZDB-GENE-080917-54]
2. si:ch211-243a22.1 si:ch211-243a22.1 42 2.333 - 0.866 0.732 - - 0.735 - - -
3. si:ch211-225b11.4 ENSDARG00000093563 42 1.832 - - - - - 0.942 0.890 - - si:ch211-225b11.4 [Source:ZFIN;Acc:ZDB-GENE-060526-114]
4. bhlhe22 ENSDARG00000058039 1673 1.705 0.804 0.901 - - - - - - - basic helix-loop-helix family, member e22 [Source:ZFIN;Acc:ZDB-GENE-040426-1411]
5. slc22a7a ENSDARG00000056028 2426 1.699 0.819 0.880 - - - - - - - solute carrier family 22 (organic anion transporter), member 7a [Source:ZFIN;Acc:ZDB-GENE-050506-52]
6. aatkb ENSDARG00000104442 392 1.664 0.798 0.866 - - - - - - - apoptosis-associated tyrosine kinase b [Source:ZFIN;Acc:ZDB-GENE-100812-6]
7. sc:d217 ENSDARG00000079645 32 1.641 - 0.839 - - - 0.802 - - - sc:d217 [Source:ZFIN;Acc:ZDB-GENE-080303-15]
8. lhx1b ENSDARG00000007944, ENSDARG00000111635 254 1.641 0.801 0.840 - - - - - - - LIM homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-980526-116]
9. C17H15orf41 C17H15orf41 313 1.634 0.739 0.895 - - - - - - -
10. PEG3_30 PEG3_30 60 1.63 - 0.716 - - - 0.914 - - -
11. lhfpl4a ENSDARG00000111810 206 1.622 0.783 0.839 - - - - - - - lipoma HMGIC fusion partner-like 4a [Source:ZFIN;Acc:ZDB-GENE-111017-1]
12. LMTK3 LMTK3 222 1.618 0.752 0.866 - - - - - - -
13. EXD1 ENSDARG00000098669 27 1.616 0.746 0.870 - - - - - - - exonuclease 3'-5' domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060825-267]
14. atp1a1b ENSDARG00000019856, ENSDARG00000115121 1953 1.605 0.880 0.725 - - - - - - - ATPase Na+/K+ transporting subunit alpha 1b [Source:ZFIN;Acc:ZDB-GENE-001212-5]
15. LRRK1_1 LRRK1_1 11 1.601 - 0.866 - - - 0.735 - - -
16. PCDH10 PCDH10 7 1.601 - 0.866 - - - 0.735 - - -
17. si:ch211-108c6.2 14 1.601 - 0.866 - - - 0.735 - - - si:ch211-108c6.2
18. nid2b ENSDARG00000009471 4 1.601 - 0.866 - - - 0.735 - - - nidogen 2b (osteonidogen) [Source:ZFIN;Acc:ZDB-GENE-040724-143]
19. BX927122.3 BX927122.3 19 1.601 - 0.866 - - - 0.735 - - -
20. GABRA3 ENSDARG00000090883 5 1.601 - 0.866 - - - 0.735 - - - gamma-aminobutyric acid (GABA) A receptor, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-091204-365]
21. si:ch73-7i4.1 ENSDARG00000094554 771 1.599 - 0.866 - - - - 0.733 - - si:ch73-7i4.1 [Source:ZFIN;Acc:ZDB-GENE-100921-19]
22. abcc9 ENSDARG00000015985 20 1.599 - 0.866 - - - - 0.733 - - ATP-binding cassette, sub-family C (CFTR/MRP), member 9 [Source:ZFIN;Acc:ZDB-GENE-050517-23]
23. ZNF337_16 ZNF337_16 22 1.599 - 0.866 - - - - 0.733 - -
24. SNORA31 SNORA31 23 1.599 - 0.866 - - - - 0.733 - -
25. apnl ENSDARG00000090900 21 1.598 - 0.866 0.732 - - - - - - actinoporin-like protein [Source:ZFIN;Acc:ZDB-GENE-030131-8907]
26. panx1b ENSDARG00000014910, ENSDARG00000112399 136 1.594 0.728 0.866 - - - - - - - pannexin 1b [Source:ZFIN;Acc:ZDB-GENE-070705-192]
27. LRRC71 LRRC71 11 1.589 - 0.854 - - - 0.735 - - -
28. FAM117B FAM117B 225 1.577 - 0.866 - - - 0.711 - - -
29. kcna1 kcna1 174 1.567 - 0.866 - - - - 0.701 - -
30. rims2b ENSDARG00000102690 275 1.564 0.725 0.839 - - - - - - - regulating synaptic membrane exocytosis 2b [Source:ZFIN;Acc:ZDB-GENE-060503-893]
31. mir10d-1 mir10d-1 860 1.558 0.823 0.735 - - - - - - -
32. pcdh1gc5 ENSDARG00000104826 10052 1.518 0.791 0.727 - - - - - - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
33. neurog1 ENSDARG00000056130 3924 1.498 0.717 0.781 - - - - - - - neurogenin 1 [Source:ZFIN;Acc:ZDB-GENE-990415-174]
34. sox19b ENSDARG00000040266 532 1.496 0.701 0.795 - - - - - - - SRY (sex determining region Y)-box 19b [Source:ZFIN;Acc:ZDB-GENE-010111-1]
35. zic5 ENSDARG00000016022 1034 1.495 - - - 0.719 - - - - 0.776 zic family member 5 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040622-1]
36. clcn6 ENSDARG00000032577 174 1.489 - 0.787 - - - 0.702 - - - chloride channel 6 [Source:ZFIN;Acc:ZDB-GENE-030131-2056]
37. polg ENSDARG00000060951 33 1.481 0.746 - - - - 0.735 - - - polymerase (DNA directed), gamma [Source:ZFIN;Acc:ZDB-GENE-060303-1]
38. asic4a ENSDARG00000025162 25 1.479 0.744 - - - - 0.735 - - - acid-sensing (proton-gated) ion channel family member 4a [Source:ZFIN;Acc:ZDB-GENE-040513-5]
39. si:ch211-71k24.5 si:ch211-71k24.5 9 1.468 - - - - - 0.735 0.733 - -
40. BX322608.1 ENSDARG00000111690 326 1.468 - - - - - 0.735 0.733 - -
41. chrna5 ENSDARG00000003420 137 1.438 0.723 - 0.715 - - - - - - cholinergic receptor, nicotinic, alpha 5 [Source:ZFIN;Acc:ZDB-GENE-050417-440]
42. RSF1_1 RSF1_1 62 1.435 0.720 0.715 - - - - - - -
43. cacnb2a ENSDARG00000099045 374 1 - - - - - 1.000 - - - calcium channel, voltage-dependent, beta 2a [Source:ZFIN;Acc:ZDB-GENE-080808-7]
44. CABZ01027547.1 CABZ01027547.1 128 1 - - - - - 1.000 - - -
45. SYT6 SYT6 64 0.942 - - - - - 0.942 - - -
46. VWDE ENSDARG00000103443 10 0.942 - - - - - 0.942 - - - von Willebrand factor D and EGF domains [Source:ZFIN;Acc:ZDB-GENE-060929-1226]
47. si:ch211-277p15.1 2 0.942 - - - - - 0.942 - - - si:ch211-277p15.1, transcript variant X5
48. ddr2b ENSDARG00000058695 7 0.942 - - - - - 0.942 - - - discoidin domain receptor tyrosine kinase 2b [Source:ZFIN;Acc:ZDB-GENE-060503-361]
49. unc5da ENSDARG00000092722 8 0.942 - - - - - 0.942 - - - unc-5 netrin receptor Da [Source:ZFIN;Acc:ZDB-GENE-080908-2]
50. si:dkeyp-52c3.5 si:dkeyp-52c3.5 9 0.942 - - - - - 0.942 - - -
51. CCDC138 CCDC138 73 0.942 - - - - - 0.942 - - -
52. si:dkey-72l14.7 si:dkey-72l14.7 3 0.942 - - - - - 0.942 - - -
53. SMOC1 ENSDARG00000088255 507 0.93 - 0.930 - - - - - - - SPARC related modular calcium binding 1 [Source:ZFIN;Acc:ZDB-GENE-110310-7]
54. pask ENSDARG00000075008 302 0.928 - - - - - 0.928 - - - PAS domain containing serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-030131-1394]
55. nhlh2 ENSDARG00000025495 1860 0.919 - 0.919 - - - - - - - nescient helix loop helix 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1809]
56. CNGB1 CNGB1 40 0.916 - - - - - 0.916 - - -
57. rcvrna ENSDARG00000052223, ENSDARG00000113117 20 0.914 - - - - - 0.914 - - - recoverin a [Source:ZFIN;Acc:ZDB-GENE-050913-106]
58. CABZ01081752.1 ENSDARG00000099245 84 0.914 - - - - - 0.914 - - - gastrula zinc finger protein XlCGF8.2DB-like [Source:NCBI gene;Acc:100330167]
59. gpr56 gpr56 523 0.907 - 0.907 - - - - - - -
60. PARP14 PARP14 164 0.894 - - - - - - 0.894 - -
61. zgc:114037_4 57 0.89 - - - - - - 0.890 - - zgc:114037
62. tcf21 ENSDARG00000036869, ENSDARG00000111209 37 0.89 - - - - - - 0.890 - - transcription factor 21 [Source:ZFIN;Acc:ZDB-GENE-051113-88]
63. si:ch211-155o21.4 ENSDARG00000096567 25 0.89 - - - - - - 0.890 - - si:ch211-155o21.4 [Source:ZFIN;Acc:ZDB-GENE-121214-169]
64. fra10ac1 ENSDARG00000102615 425 0.888 - - - - - 0.888 - - - FRA10A associated CGG repeat 1 [Source:ZFIN;Acc:ZDB-GENE-041010-95]
65. sh3glb2b ENSDARG00000035470, ENSDARG00000109833 719 0.888 0.888 - - - - - - - - SH3-domain GRB2-like endophilin B2b [Source:ZFIN;Acc:ZDB-GENE-040426-833]
66. CABZ01070258.1 ENSDARG00000105687 3643 0.884 0.884 - - - - - - - -
67. elfn1b ENSDARG00000074372 25 0.883 - - - - - 0.883 - - - extracellular leucine-rich repeat and fibronectin type III domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-080327-21]
68. rab3c ENSDARG00000014462, ENSDARG00000042803 508 0.882 - 0.882 - - - - - - - RAB3C, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040718-263]
69. UBASH3B_1 UBASH3B_1 28 0.881 - 0.881 - - - - - - -
70. dlg2 ENSDARG00000099323 162 0.88 - 0.880 - - - - - - - discs, large homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050221-3]
71. Mar-04 Mar-04 21 0.88 - - - - - 0.880 - - -
72. ankrd29 ENSDARG00000057159, ENSDARG00000112325 64 0.88 - - - - - 0.880 - - - ankyrin repeat domain 29 [Source:ZFIN;Acc:ZDB-GENE-050208-655]
73. s100a1 ENSDARG00000015543 274 0.879 - 0.879 - - - - - - - S100 calcium binding protein A1 [Source:ZFIN;Acc:ZDB-GENE-040916-1]
74. BCL6B ENSDARG00000069335 602 0.877 - 0.877 - - - - - - - B-cell CLL/lymphoma 6, member B [Source:ZFIN;Acc:ZDB-GENE-120907-1]
75. UBAC2_1 UBAC2_1 23 0.877 - 0.877 - - - - - - -
76. si:ch211-89o5.1 si:ch211-89o5.1 91 0.876 - - - - - - 0.876 - -
77. sv2bb ENSDARG00000060711 196 0.876 0.876 - - - - - - - - synaptic vesicle glycoprotein 2Bb [Source:ZFIN;Acc:ZDB-GENE-030131-2789]
78. ROBO3_1 ROBO3_1 468 0.873 - 0.873 - - - - - - -
79. ZNF784 ZNF784 51 0.872 - 0.872 - - - - - - -
80. si:dkey-92j12.6 211 0.872 0.872 - - - - - - - - si:dkey-92j12.6
81. zgc:110130 ENSDARG00000039203 352 0.872 - 0.872 - - - - - - - zgc:110130 [Source:ZFIN;Acc:ZDB-GENE-050522-208]
82. esm1 ENSDARG00000104370 186 0.869 - - - - - - 0.869 - - endothelial cell-specific molecule 1 [Source:ZFIN;Acc:ZDB-GENE-060929-748]
83. si:dkey-7b17.1 si:dkey-7b17.1 101 0.868 - - - - - 0.868 - - -
84. GPR89A ENSDARG00000077983 463 0.867 0.867 - - - - - - - - G protein-coupled receptor 89A [Source:HGNC Symbol;Acc:HGNC:31984]
85. abcb9 ENSDARG00000056200, ENSDARG00000109326 63 0.866 - 0.866 - - - - - - - ATP-binding cassette, sub-family B (MDR/TAP), member 9 [Source:ZFIN;Acc:ZDB-GENE-050517-12]
86. csf2rb ENSDARG00000076586, ENSDARG00000112627, ENSDARG00000114668 9 0.866 - 0.866 - - - - - - - colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage) [Source:ZFIN;Acc:ZDB-GENE-080115-1]
87. traf1 ENSDARG00000069482 50 0.866 - 0.866 - - - - - - - TNF receptor-associated factor 1 [Source:ZFIN;Acc:ZDB-GENE-071120-4]
88. si:ch211-239j9.1 ENSDARG00000096319 27 0.866 - 0.866 - - - - - - - si:ch211-239j9.1 [Source:ZFIN;Acc:ZDB-GENE-120215-212]
89. CR626874.1 ENSDARG00000100141 55 0.866 - 0.866 - - - - - - -
90. TMEM57 TMEM57 260 0.866 - 0.866 - - - - - - -
91. ITPRIPL2 88 0.866 - 0.866 - - - - - - - inositol 1,4,5-trisphosphate receptor interacting protein like 2
92. ODF2 ODF2 6 0.866 - 0.866 - - - - - - -
93. si:ch211-157l15.4 si:ch211-157l15.4 92 0.866 - 0.866 - - - - - - -
94. CU457778.2 ENSDARG00000109381 2 0.866 - 0.866 - - - - - - - gastrula zinc finger protein XlCGF8.2DB-like [Source:NCBI gene;Acc:100329258]
95. ccr6a ENSDARG00000087474 10 0.866 - 0.866 - - - - - - - chemokine (C-C motif) receptor 6a [Source:ZFIN;Acc:ZDB-GENE-040625-126]
96. SNORD30 SNORD30 34 0.866 - 0.866 - - - - - - -
97. itih6 ENSDARG00000056037 3 0.866 - 0.866 - - - - - - - inter-alpha-trypsin inhibitor heavy chain family, member 6 [Source:ZFIN;Acc:ZDB-GENE-050603-1]
98. hsp70l_1 ENSDARG00000055723 72 0.866 - 0.866 - - - - - - - heat shock cognate 70-kd protein, like [Source:ZFIN;Acc:ZDB-GENE-050321-1]
99. fam43b ENSDARG00000070222 92 0.866 - 0.866 - - - - - - - family with sequence similarity 43, member B [Source:ZFIN;Acc:ZDB-GENE-040912-11]
100. BX000703.2 BX000703.2 10 0.866 - 0.866 - - - - - - -

There are 1060 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA