Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for pax6a

Gene Name Gene ID Reads Annotation
pax6a ENSDARG00000103379 3061 paired box 6a [Source:ZFIN;Acc:ZDB-GENE-990415-200]










Genes with expression patterns similar to pax6a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pax6a ENSDARG00000103379 3061 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 paired box 6a [Source:ZFIN;Acc:ZDB-GENE-990415-200]
2. nat8l ENSDARG00000077256, ENSDARG00000115322 3513 4.336 0.802 - 0.703 - - 0.965 0.978 0.888 - N-acetyltransferase 8-like [Source:ZFIN;Acc:ZDB-GENE-030729-4]
3. bhlhe22 ENSDARG00000058039 1673 4.208 0.865 0.701 - - - 0.845 0.926 0.871 - basic helix-loop-helix family, member e22 [Source:ZFIN;Acc:ZDB-GENE-040426-1411]
4. amph ENSDARG00000007663 599 4.103 0.728 0.792 - - - 0.868 0.990 0.725 - amphiphysin [Source:ZFIN;Acc:ZDB-GENE-040426-1711]
5. st18 663 3.987 0.733 0.865 - - - 0.835 0.831 0.723 - suppression of tumorigenicity 18, zinc finger
6. gng3 ENSDARG00000009553 2530 3.7 0.850 - - - - 0.911 0.944 - 0.995 guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]
7. dbx2 2971 3.664 0.888 0.889 - - - 0.910 0.977 - - developing brain homeobox 2
8. neurog1 ENSDARG00000056130 3924 3.654 0.886 0.905 - - - 0.918 0.945 - - neurogenin 1 [Source:ZFIN;Acc:ZDB-GENE-990415-174]
9. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 3.624 0.903 - - - - 0.964 0.991 0.766 - cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
10. sox19b ENSDARG00000040266 532 3.621 0.945 0.910 - - - 0.874 0.892 - - SRY (sex determining region Y)-box 19b [Source:ZFIN;Acc:ZDB-GENE-010111-1]
11. dbx1a ENSDARG00000086393 3161 3.598 0.767 0.949 - - - 0.908 0.974 - - developing brain homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-000128-8]
12. nadl1.1 1200 3.562 0.879 0.808 - - - 0.970 0.905 - - neural adhesion molecule L1.1, transcript variant X1
13. MAP1A MAP1A 847 3.55 0.763 0.898 - - - 0.925 0.964 - -
14. mir10d-1 mir10d-1 860 3.546 0.853 0.913 - - - 0.851 0.929 - -
15. scrt2 ENSDARG00000056175 4331 3.53 0.775 0.828 - - - 0.936 0.991 - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
16. fez1 ENSDARG00000023174 701 3.527 0.854 - - - - 0.819 0.952 0.902 - fasciculation and elongation protein zeta 1 (zygin I) [Source:ZFIN;Acc:ZDB-GENE-040426-2723]
17. stx1b ENSDARG00000000503 2724 3.506 0.824 0.727 - - - 0.967 0.988 - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
18. slc18a3a ENSDARG00000006356 1285 3.504 0.786 0.823 - - - 0.949 0.946 - - solute carrier family 18 (vesicular acetylcholine transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-060929-990]
19. nes ENSDARG00000088805 2710 3.49 0.810 0.906 - - - 0.900 0.874 - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
20. pcdh1gc5 ENSDARG00000104826 10052 3.486 0.824 0.837 - - - 0.925 0.900 - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
21. nova2 ENSDARG00000017673 7685 3.469 0.804 0.777 - - - 0.974 0.914 - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
22. ROBO3_1 ROBO3_1 468 3.453 0.738 0.913 - - - 0.823 0.979 - -
23. mllt11 ENSDARG00000071026 2518 3.446 0.871 - - - - 0.952 0.857 0.766 - MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
24. myt1b ENSDARG00000102879 5411 3.439 0.818 0.777 - - - 0.926 0.918 - - myelin transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-090313-67]
25. onecut1 ENSDARG00000007982, ENSDARG00000112251 6307 3.431 0.796 0.744 - - - 0.941 0.950 - - one cut homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1469]
26. gnao1a ENSDARG00000016676 8184 3.427 0.797 0.706 - 0.981 - - 0.943 - - guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, a [Source:ZFIN;Acc:ZDB-GENE-040426-1757]
27. CABZ01070258.1 ENSDARG00000105687 3643 3.423 0.754 0.733 - 0.969 - - 0.967 - -
28. nbeaa ENSDARG00000070080 862 3.414 0.877 - - - - 0.849 0.972 0.716 - neurobeachin a [Source:ZFIN;Acc:ZDB-GENE-050320-68]
29. lhx1a ENSDARG00000014018 958 3.412 - 0.820 0.720 - - 0.925 0.947 - - LIM homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-347]
30. CABZ01111990.1 CABZ01111990.1 4374 3.409 0.751 - - - - 0.901 0.951 0.806 -
31. slc35g2b ENSDARG00000045447 378 3.4 0.717 0.945 - - - 0.876 0.862 - - solute carrier family 35, member G2b [Source:ZFIN;Acc:ZDB-GENE-050320-142]
32. celf4 ENSDARG00000070045 1537 3.398 0.758 - - - - 0.863 0.906 0.871 - CUGBP, Elav-like family member 4 [Source:ZFIN;Acc:ZDB-GENE-040718-300]
33. snap25a ENSDARG00000020609 4537 3.395 0.729 0.767 - - - 0.952 0.947 - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
34. pcsk1nl ENSDARG00000076170 1232 3.394 0.908 0.736 - - - 0.828 0.922 - - proprotein convertase subtilisin/kexin type 1 inhibitor, like [Source:ZFIN;Acc:ZDB-GENE-090427-2]
35. hmgb3a ENSDARG00000056725 15668 3.388 0.791 - - 0.892 - 0.923 0.782 - - high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
36. BX957337.1 BX957337.1 1685 3.374 0.806 0.741 - - - 0.864 0.963 - -
37. C8H1orf106 C8H1orf106 2690 3.369 0.904 0.760 - - - 0.899 0.806 - -
38. scn2b ENSDARG00000101713 796 3.369 0.764 0.792 - - - 0.885 0.928 - - sodium channel, voltage-gated, type II, beta [Source:ZFIN;Acc:ZDB-GENE-070920-1]
39. BSN BSN 463 3.368 0.886 - - - - 0.903 0.792 0.787 -
40. glrbb ENSDARG00000052769, ENSDARG00000113828 467 3.364 0.708 0.752 - - - 0.964 0.940 - - glycine receptor, beta b [Source:ZFIN;Acc:ZDB-GENE-040801-106]
41. si:ch73-21g5.7 ENSDARG00000093156 9412 3.357 0.863 0.794 - - - 0.758 0.942 - - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
42. irx1b ENSDARG00000056594 2224 3.352 0.854 0.765 - - - 0.810 0.923 - - iroquois homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-010716-1]
43. CU928222.1 ENSDARG00000097436 1662 3.351 0.792 0.915 - - - 0.775 0.869 - -
44. stmn2a ENSDARG00000033234 2272 3.35 0.711 0.832 - - - 0.843 0.964 - - stathmin 2a [Source:ZFIN;Acc:ZDB-GENE-041010-85]
45. zic4 ENSDARG00000031307 1228 3.341 - 0.776 - 0.971 - 0.863 0.731 - - zic family member 4 [Source:ZFIN;Acc:ZDB-GENE-040622-4]
46. nrarpb ENSDARG00000018958 6225 3.334 0.709 0.809 - - - 0.903 0.913 - - NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
47. pou3f2b ENSDARG00000076262, ENSDARG00000112713 2439 3.312 0.716 - - - - 0.923 0.823 0.850 - POU class 3 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-370]
48. gap43 ENSDARG00000099744 4114 3.309 0.725 0.734 - - - 0.925 0.925 - - growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
49. prrt1 ENSDARG00000062208 368 3.308 0.802 - - - - 0.818 0.879 0.809 - proline-rich transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-060503-686]
50. jag1a ENSDARG00000030289 1275 3.303 0.771 0.712 - - - 0.893 0.927 - - jagged 1a [Source:ZFIN;Acc:ZDB-GENE-011128-2]
51. sv2bb ENSDARG00000060711 196 3.302 0.787 0.843 - - - 0.711 0.961 - - synaptic vesicle glycoprotein 2Bb [Source:ZFIN;Acc:ZDB-GENE-030131-2789]
52. pax6b ENSDARG00000045936 349 3.3 0.865 - 0.778 - - 0.701 0.956 - - paired box 6b [Source:ZFIN;Acc:ZDB-GENE-001031-1]
53. sox2 ENSDARG00000070913 2763 3.296 0.783 0.881 0.778 - - - 0.854 - - SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
54. CABZ01029738.1 CABZ01029738.1 327 3.293 0.735 0.919 - - - - 0.838 0.801 -
55. mbd3b ENSDARG00000042029, ENSDARG00000061810 4561 3.292 0.862 - - - 0.702 0.936 0.792 - - methyl-CpG binding domain protein 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9792]
56. CHL1 CHL1 1553 3.289 0.733 0.743 - - - 0.905 0.908 - -
57. CLIP3 ENSDARG00000054456 734 3.287 0.844 0.821 - - - - 0.839 0.783 - CAP-GLY domain containing linker protein 3 [Source:ZFIN;Acc:ZDB-GENE-131127-193]
58. jagn1a ENSDARG00000041071, ENSDARG00000109427 397 3.226 0.767 0.837 - - - 0.711 0.911 - - jagunal homolog 1a [Source:ZFIN;Acc:ZDB-GENE-041010-80]
59. gad2 ENSDARG00000015537 724 3.219 0.751 0.875 - - - 0.734 - 0.859 - glutamate decarboxylase 2 [Source:ZFIN;Acc:ZDB-GENE-030909-9]
60. syngr3a ENSDARG00000014871 405 3.215 0.720 0.710 - - - 0.891 0.894 - - synaptogyrin 3a [Source:ZFIN;Acc:ZDB-GENE-050522-541]
61. fam60al 2846 3.196 0.763 - - - - 0.807 0.823 0.803 - family with sequence similarity 60, member A, like
62. fzd3a ENSDARG00000021664 1958 3.194 0.850 0.701 - - - 0.823 0.820 - - frizzled class receptor 3a [Source:ZFIN;Acc:ZDB-GENE-990415-225]
63. atp1b4 ENSDARG00000053262 1337 3.186 0.845 0.749 - - - 0.840 0.752 - - ATPase Na+/K+ transporting subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-070412-1]
64. mapk12b ENSDARG00000006409 2246 3.175 0.705 0.741 - - - 0.769 0.960 - - mitogen-activated protein kinase 12b [Source:ZFIN;Acc:ZDB-GENE-041210-123]
65. csf1b ENSDARG00000068263 248 3.133 0.843 0.713 - - - 0.720 0.857 - - colony stimulating factor 1b (macrophage) [Source:ZFIN;Acc:ZDB-GENE-061215-106]
66. atp6v0a2a ENSDARG00000035538 278 3.127 0.748 - - - - 0.727 0.925 0.727 - ATPase H+ transporting V0 subunit a2a [Source:ZFIN;Acc:ZDB-GENE-091113-4]
67. phyhipla ENSDARG00000003998, ENSDARG00000115785 262 3.096 0.705 - - - - 0.772 0.828 0.791 - phytanoyl-CoA 2-hydroxylase interacting protein-like a [Source:ZFIN;Acc:ZDB-GENE-061215-64]
68. vezf1a ENSDARG00000008247 1449 3.061 - - 0.723 - 0.795 0.826 0.717 - - vascular endothelial zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-040108-4]
69. syt11b ENSDARG00000056105 578 3.02 0.716 0.716 - - - 0.835 - 0.753 - synaptotagmin XIb [Source:ZFIN;Acc:ZDB-GENE-090601-7]
70. pcdh19 ENSDARG00000034344 2378 2.952 - - - - 0.706 0.788 0.755 0.703 - protocadherin 19 [Source:ZFIN;Acc:ZDB-GENE-030131-4218]
71. cadm3 ENSDARG00000057013 1545 2.808 - 0.904 - - - 0.940 0.964 - - cell adhesion molecule 3 [Source:ZFIN;Acc:ZDB-GENE-060512-196]
72. elavl3 ENSDARG00000014420 8644 2.794 - - - - - 0.903 0.907 - 0.984 ELAV like neuron-specific RNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-980526-76]
73. otpa ENSDARG00000014201 2290 2.794 - - - 0.974 - 0.862 0.958 - - orthopedia homeobox a [Source:ZFIN;Acc:ZDB-GENE-070216-1]
74. itm2ca ENSDARG00000043448 1265 2.792 - 0.907 - - - 0.953 0.932 - - integral membrane protein 2Ca [Source:ZFIN;Acc:ZDB-GENE-040718-284]
75. SPOCK1 ENSDARG00000074644 794 2.786 0.894 - - - - 0.963 0.929 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:ZFIN;Acc:ZDB-GENE-110428-1]
76. gfap ENSDARG00000025301 5584 2.784 0.872 - - - - 0.942 0.970 - - glial fibrillary acidic protein [Source:ZFIN;Acc:ZDB-GENE-990914-3]
77. clstn3 ENSDARG00000073883 590 2.764 0.811 - - - - 0.957 0.996 - - calsyntenin 3 [Source:ZFIN;Acc:ZDB-GENE-100921-73]
78. tuba1c ENSDARG00000055216 8384 2.755 0.828 - - - - 0.965 0.962 - - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
79. kcnc3a ENSDARG00000055855 1821 2.753 0.799 - - - - 0.977 0.977 - - potassium voltage-gated channel, Shaw-related subfamily, member 3a [Source:ZFIN;Acc:ZDB-GENE-100901-1]
80. atp6v0cb ENSDARG00000036577 3472 2.752 0.849 - - - - 0.962 0.941 - - ATPase H+ transporting V0 subunit cb [Source:ZFIN;Acc:ZDB-GENE-030131-4127]
81. mb21d2a mb21d2a 421 2.74 - 0.927 - - - 0.843 0.970 - -
82. slc1a2b ENSDARG00000102453 3136 2.737 - 0.813 - - - 0.947 0.977 - - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
83. lrrtm1 ENSDARG00000052713 1041 2.728 - - - 0.974 - 0.831 0.923 - - leucine rich repeat transmembrane neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-050506-80]
84. EPB41L1 EPB41L1 1896 2.727 0.778 - - - - 0.968 0.981 - -
85. sox19a ENSDARG00000010770, ENSDARG00000110497 4683 2.726 0.871 - - - - 0.895 0.960 - - SRY (sex determining region Y)-box 19a [Source:ZFIN;Acc:ZDB-GENE-980526-102]
86. TUBB8P7_2 TUBB8P7_2 565 2.724 0.901 - - - - 0.872 0.951 - -
87. epha4b ENSDARG00000011600 3110 2.723 0.858 - - - - 0.943 0.922 - - eph receptor A4b [Source:ZFIN;Acc:ZDB-GENE-030826-6]
88. celf3a ENSDARG00000034668 2432 2.72 - - - 0.976 - 0.947 - 0.797 - cugbp, Elav-like family member 3a [Source:ZFIN;Acc:ZDB-GENE-000501-2]
89. scn8aa ENSDARG00000005775 792 2.717 0.778 - - - - 0.963 0.976 - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
90. INA INA 950 2.715 0.734 - - - - 0.986 0.995 - -
91. sncgb ENSDARG00000109715 1014 2.714 0.830 - - - - 0.914 0.970 - - synuclein, gamma b (breast cancer-specific protein 1) [Source:ZFIN;Acc:ZDB-GENE-050522-235]
92. slc8a2b ENSDARG00000100592 598 2.709 0.820 - - - - 0.912 0.977 - - solute carrier family 8 (sodium/calcium exchanger), member 2b [Source:ZFIN;Acc:ZDB-GENE-050419-209]
93. atp6v1b2 ENSDARG00000043465, ENSDARG00000113422 682 2.703 0.871 - - - - 0.900 0.932 - - ATPase H+ transporting V1 subunit B2 [Source:ZFIN;Acc:ZDB-GENE-030711-4]
94. stmn2b ENSDARG00000070537 1586 2.697 0.851 - - - - 0.948 0.898 - - stathmin 2b [Source:ZFIN;Acc:ZDB-GENE-050522-207]
95. nhlh2 ENSDARG00000025495 1860 2.696 - 0.907 - - - 0.900 0.889 - - nescient helix loop helix 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1809]
96. TUBB8P7_1 TUBB8P7_1 2722 2.681 0.827 - - - - 0.950 0.904 - -
97. tmie ENSDARG00000069423 305 2.679 0.859 - - - - 0.873 0.947 - - transmembrane inner ear [Source:ZFIN;Acc:ZDB-GENE-061207-9]
98. stxbp1a ENSDARG00000001994 5154 2.675 - 0.852 - - - 0.890 0.933 - - syntaxin binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050626-106]
99. rab3ab ENSDARG00000043835 1267 2.675 0.781 - - - - 0.924 0.970 - - RAB3A, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-041210-268]
100. nefmb ENSDARG00000043697 2052 2.674 0.845 - - - - 0.956 0.873 - - neurofilament, medium polypeptide b [Source:ZFIN;Acc:ZDB-GENE-070103-4]

There are 2343 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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