Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for pax3a

Gene Name Gene ID Reads Annotation
pax3a ENSDARG00000010192 626 paired box 3a [Source:ZFIN;Acc:ZDB-GENE-980526-52]










Genes with expression patterns similar to pax3a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pax3a ENSDARG00000010192 626 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 paired box 3a [Source:ZFIN;Acc:ZDB-GENE-980526-52]
2. mapk12b ENSDARG00000006409 2246 3.302 0.781 0.712 - - - 0.908 0.901 - - mitogen-activated protein kinase 12b [Source:ZFIN;Acc:ZDB-GENE-041210-123]
3. vsnl1a ENSDARG00000023228 1584 3.27 0.758 0.762 - - - 0.980 0.770 - - visinin-like 1a [Source:ZFIN;Acc:ZDB-GENE-041001-211]
4. nrn1a ENSDARG00000071860 1311 3.266 0.714 0.708 - - - 0.970 0.874 - - neuritin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-212]
5. scn8aa ENSDARG00000005775 792 3.258 0.724 0.732 - - - 0.892 0.910 - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
6. igsf9a ENSDARG00000075864 1870 3.144 0.817 - 0.715 - - 0.885 0.727 - - immunoglobulin superfamily, member 9a [Source:ZFIN;Acc:ZDB-GENE-060503-288]
7. KCNAB2 KCNAB2 129 3.125 0.702 - - - - 0.803 0.784 0.836 -
8. hpca ENSDARG00000018397, ENSDARG00000110115 3866 2.655 0.790 - - - - 0.976 0.889 - - hippocalcin [Source:ZFIN;Acc:ZDB-GENE-040426-1683]
9. stmn1b ENSDARG00000033655 9491 2.619 0.785 - - - - 0.957 0.877 - - stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
10. dpysl5a ENSDARG00000011141 1827 2.599 - 0.751 - - - 0.938 0.910 - - dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
11. cnrip1a ENSDARG00000091683 1491 2.593 - 0.760 - - - 0.943 0.890 - - cannabinoid receptor interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-126]
12. pnoca ENSDARG00000025024 467 2.588 0.826 - - - - 0.937 0.825 - - prepronociceptin a [Source:ZFIN;Acc:ZDB-GENE-101229-1]
13. TUSC5 TUSC5 1436 2.583 0.743 - - - - 0.975 0.865 - -
14. amph ENSDARG00000007663 599 2.581 0.784 - - - - 0.890 0.907 - - amphiphysin [Source:ZFIN;Acc:ZDB-GENE-040426-1711]
15. adam11 ENSDARG00000079204 298 2.578 0.819 - - - - 0.835 0.924 - - ADAM metallopeptidase domain 11 [Source:ZFIN;Acc:ZDB-GENE-070808-3]
16. gap43 ENSDARG00000099744 4114 2.572 0.806 - - - - 0.919 0.847 - - growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
17. TPPP2 ENSDARG00000035338, ENSDARG00000113727 298 2.567 0.755 - - - - 0.930 0.882 - - tubulin polymerization-promoting protein family member 2 [Source:ZFIN;Acc:ZDB-GENE-140106-24]
18. olfm1b ENSDARG00000014053 1392 2.562 0.755 - - - - 0.923 0.884 - - olfactomedin 1b [Source:ZFIN;Acc:ZDB-GENE-040801-228]
19. cers6 ENSDARG00000053583 247 2.559 - 0.795 - - - 0.943 0.821 - - ceramide synthase 6 [Source:ZFIN;Acc:ZDB-GENE-070522-1]
20. SNAP91 ENSDARG00000098809 556 2.555 - 0.772 - - - 0.929 0.854 - - synaptosomal-associated protein 91 [Source:ZFIN;Acc:ZDB-GENE-100422-6]
21. LINGO2 LINGO2 300 2.552 - - - - - 0.912 0.846 0.794 -
22. lhx5 ENSDARG00000057936 785 2.55 0.766 - - - - 0.970 0.814 - - LIM homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-484]
23. lmo3 ENSDARG00000008720, ENSDARG00000114518 4773 2.542 - 0.742 - - - 0.944 0.856 - - LIM domain only 3 [Source:ZFIN;Acc:ZDB-GENE-050522-201]
24. stmn2a ENSDARG00000033234 2272 2.541 0.737 - - - - 0.960 0.844 - - stathmin 2a [Source:ZFIN;Acc:ZDB-GENE-041010-85]
25. slc1a3a ENSDARG00000104431 9888 2.54 0.739 - - - - 0.930 0.871 - - solute carrier family 1 (glial high affinity glutamate transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2159]
26. thsd7ba ENSDARG00000095022 231 2.532 - 0.752 - - - 0.905 0.875 - - thrombospondin, type I, domain containing 7Ba [Source:ZFIN;Acc:ZDB-GENE-070621-2]
27. stmn2b ENSDARG00000070537 1586 2.529 - 0.767 - - - 0.917 0.845 - - stathmin 2b [Source:ZFIN;Acc:ZDB-GENE-050522-207]
28. sncgb ENSDARG00000109715 1014 2.529 - - - - - 0.960 0.836 0.733 - synuclein, gamma b (breast cancer-specific protein 1) [Source:ZFIN;Acc:ZDB-GENE-050522-235]
29. MAP1A MAP1A 847 2.525 0.714 - - - - 0.921 0.890 - -
30. scrt2 ENSDARG00000056175 4331 2.52 0.720 - - - - 0.914 0.886 - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
31. scn8ab ENSDARG00000018032, ENSDARG00000112543 883 2.518 0.787 - - - - 0.886 0.845 - - sodium channel, voltage gated, type VIII, alpha subunit b [Source:ZFIN;Acc:ZDB-GENE-060906-2]
32. rab3ab ENSDARG00000043835 1267 2.514 0.713 - - - - 0.922 0.879 - - RAB3A, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-041210-268]
33. slc17a6b ENSDARG00000041150 823 2.511 0.720 - - - - 0.884 0.907 - - solute carrier family 17 (vesicular glutamate transporter), member 6b [Source:ZFIN;Acc:ZDB-GENE-030616-554]
34. atp2b3b ENSDARG00000023445 1424 2.51 - 0.759 - - - 0.963 0.788 - - ATPase plasma membrane Ca2+ transporting 3b [Source:ZFIN;Acc:ZDB-GENE-080409-2]
35. tuba1c ENSDARG00000055216 8384 2.505 0.726 - - - - 0.909 0.870 - - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
36. snap25a ENSDARG00000020609 4537 2.504 0.754 - - - - 0.918 0.832 - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
37. slc32a1 ENSDARG00000059775 1092 2.489 - 0.730 - - - 0.890 0.869 - - solute carrier family 32 (GABA vesicular transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-061201-1]
38. pou4f1 ENSDARG00000005559 821 2.487 0.811 - - - - 0.832 0.844 - - POU class 4 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-000523-2]
39. fez1 ENSDARG00000023174 701 2.482 0.705 - - - - 0.888 0.889 - - fasciculation and elongation protein zeta 1 (zygin I) [Source:ZFIN;Acc:ZDB-GENE-040426-2723]
40. syt9a ENSDARG00000003994 298 2.481 0.723 - - - - 0.925 0.833 - - synaptotagmin IXa [Source:ZFIN;Acc:ZDB-GENE-031002-18]
41. pcsk1nl ENSDARG00000076170 1232 2.481 - 0.730 - - - 0.924 0.827 - - proprotein convertase subtilisin/kexin type 1 inhibitor, like [Source:ZFIN;Acc:ZDB-GENE-090427-2]
42. dpysl3 ENSDARG00000002587 4381 2.48 0.790 - - - - 0.806 0.884 - - dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
43. myt1a ENSDARG00000074030, ENSDARG00000116035 2839 2.479 - 0.750 - - - 0.812 0.917 - - myelin transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3885]
44. mdkb ENSDARG00000020708 5393 2.476 0.813 - - - - 0.961 0.702 - - midkine b [Source:ZFIN;Acc:ZDB-GENE-010131-6]
45. zic1 ENSDARG00000015567 2520 2.474 0.750 - - - - 0.943 0.781 - - zic family member 1 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-000208-4]
46. upf3a ENSDARG00000069297, ENSDARG00000111067 196 2.464 - 0.795 - - - 0.892 0.777 - - UPF3A, regulator of nonsense mediated mRNA decay [Source:ZFIN;Acc:ZDB-GENE-060721-2]
47. rbfox3 rbfox3 1443 2.461 0.791 - - - - 0.775 0.895 - -
48. dpysl2b ENSDARG00000032083, ENSDARG00000109782 3487 2.461 - 0.749 - - - 0.909 0.803 - - dihydropyrimidinase-like 2b [Source:ZFIN;Acc:ZDB-GENE-031105-1]
49. MAPK8IP1_1 MAPK8IP1_1 186 2.457 0.824 - - - - 0.826 0.807 - -
50. mllt11 ENSDARG00000071026 2518 2.455 0.741 - - - - 0.918 0.796 - - MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
51. atp6v1b2 ENSDARG00000043465, ENSDARG00000113422 682 2.448 0.753 - - - - 0.909 0.786 - - ATPase H+ transporting V1 subunit B2 [Source:ZFIN;Acc:ZDB-GENE-030711-4]
52. plp1a ENSDARG00000103732 3544 2.442 0.722 - - - - 0.872 0.848 - - proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
53. adam23a ENSDARG00000062323 580 2.439 0.763 - - - - 0.892 0.784 - - ADAM metallopeptidase domain 23a [Source:ZFIN;Acc:ZDB-GENE-070810-2]
54. b3gat2 ENSDARG00000030733 348 2.439 0.739 - - - - - 0.928 0.772 - beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S) [Source:ZFIN;Acc:ZDB-GENE-040801-191]
55. Mar-09 Mar-09 126 2.439 0.824 - - - - - 0.762 0.853 -
56. TUBB8P7_1 TUBB8P7_1 2722 2.438 0.705 - - - - 0.929 0.804 - -
57. pcsk1 ENSDARG00000002600 404 2.435 - - - - - 0.899 0.782 0.754 - proprotein convertase subtilisin/kexin type 1 [Source:ZFIN;Acc:ZDB-GENE-071009-1]
58. spock3 ENSDARG00000070266, ENSDARG00000110158 934 2.434 0.730 - - - - 0.868 0.836 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3 [Source:ZFIN;Acc:ZDB-GENE-090311-24]
59. SGIP1 SGIP1 236 2.428 0.768 - - - - 0.867 0.793 - -
60. kcnj11l ENSDARG00000031438 369 2.425 - - - 0.743 - 0.797 0.885 - - potassium inwardly-rectifying channel, subfamily J, member 11, like [Source:ZFIN;Acc:ZDB-GENE-050222-2]
61. rusc1 ENSDARG00000078125 617 2.425 0.705 - - - - 0.808 0.912 - - RUN and SH3 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100922-274]
62. rdh12 ENSDARG00000018069 396 2.423 - 0.784 - - - 0.838 0.801 - - retinol dehydrogenase 12 [Source:ZFIN;Acc:ZDB-GENE-040718-9]
63. nrarpb ENSDARG00000018958 6225 2.421 - 0.718 - - - 0.831 0.872 - - NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
64. CT030046.1 CT030046.1 190 2.42 0.800 - - - - 0.877 0.743 - -
65. tnika ENSDARG00000056218 728 2.413 - - - 0.790 - 0.896 0.727 - - TRAF2 and NCK interacting kinase a [Source:ZFIN;Acc:ZDB-GENE-030131-3767]
66. SEMA7A ENSDARG00000078707 465 2.411 - - - - - 0.880 0.810 0.721 - semaphorin 7A [Source:ZFIN;Acc:ZDB-GENE-030131-3633]
67. adcyap1b ENSDARG00000027740 1539 2.405 0.779 - - - - 0.916 0.710 - - adenylate cyclase activating polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-041010-89]
68. tox ENSDARG00000032317 9126 2.403 0.721 - - - - 0.785 0.897 - - thymocyte selection-associated high mobility group box [Source:ZFIN;Acc:ZDB-GENE-070912-181]
69. dmrt3a ENSDARG00000035290, ENSDARG00000114587 115 2.401 0.720 - - - - 0.902 0.779 - - doublesex and mab-3 related transcription factor 3a [Source:ZFIN;Acc:ZDB-GENE-021220-3]
70. dusp3a ENSDARG00000061255, ENSDARG00000113934 328 2.399 0.724 - - - - 0.854 - 0.821 - dual specificity phosphatase 3a [Source:ZFIN;Acc:ZDB-GENE-111207-3]
71. prrt1 ENSDARG00000062208 368 2.399 0.778 - - - - 0.795 0.826 - - proline-rich transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-060503-686]
72. MAP6 MAP6 643 2.391 0.747 - - - - 0.841 0.803 - -
73. CASS4 ENSDARG00000006775 760 2.389 - - - 0.760 - 0.858 0.771 - - Cas scaffold protein family member 4 [Source:ZFIN;Acc:ZDB-GENE-110131-9]
74. slc1a1 ENSDARG00000020212 104 2.389 - - - - - 0.831 0.722 0.836 - solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1 [Source:ZFIN;Acc:ZDB-GENE-040718-414]
75. lgi1a ENSDARG00000020493 1218 2.384 - 0.879 - - - 0.743 0.762 - - leucine-rich, glioma inactivated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1731]
76. cntn4 ENSDARG00000098161, ENSDARG00000109387 437 2.383 - 0.747 - - - 0.779 0.857 - - contactin 4 [Source:ZFIN;Acc:ZDB-GENE-060929-776]
77. stap2a ENSDARG00000092810 591 2.381 0.721 - - - - 0.816 0.844 - - signal transducing adaptor family member 2a [Source:ZFIN;Acc:ZDB-GENE-030131-5383]
78. zgc:109889 ENSDARG00000069600, ENSDARG00000113538 554 2.381 - 0.745 - - - 0.788 0.848 - - zgc:109889 [Source:ZFIN;Acc:ZDB-GENE-050522-547]
79. nmnat2 ENSDARG00000004580 370 2.38 0.725 - - - - 0.922 0.733 - - nicotinamide nucleotide adenylyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8201]
80. sall3b ENSDARG00000057586 982 2.369 - 0.743 - - - 0.790 0.836 - - spalt-like transcription factor 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9140]
81. cacna2d3 ENSDARG00000078760 211 2.369 0.780 0.742 - - - 0.847 - - - calcium channel, voltage dependent, alpha2/delta subunit 3 [Source:ZFIN;Acc:ZDB-GENE-030616-133]
82. dnajc6 ENSDARG00000079891 438 2.366 0.726 - - - - 0.872 0.768 - - DnaJ (Hsp40) homolog, subfamily C, member 6 [Source:ZFIN;Acc:ZDB-GENE-080104-2]
83. STMN3 ENSDARG00000038465 1009 2.366 0.753 - - - - 0.728 0.885 - - stathmin-like 3 [Source:ZFIN;Acc:ZDB-GENE-081124-2]
84. gas1b ENSDARG00000067984 1748 2.36 - - 0.775 - - 0.709 0.876 - - growth arrest-specific 1b [Source:ZFIN;Acc:ZDB-GENE-050302-79]
85. negr1 ENSDARG00000021607 1051 2.355 0.812 - - - - 0.729 0.814 - - neuronal growth regulator 1 [Source:ZFIN;Acc:ZDB-GENE-040822-27]
86. tnrc5 412 2.353 - - - 0.731 - 0.780 - 0.842 - trinucleotide repeat containing 5
87. lrp11 ENSDARG00000034076 313 2.35 - - - 0.741 - 0.761 0.848 - - low density lipoprotein receptor-related protein 11 [Source:ZFIN;Acc:ZDB-GENE-030131-7847]
88. cd99l2 ENSDARG00000056722 5036 2.35 0.701 - - - - 0.893 0.756 - - CD99 molecule-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1986]
89. klf7a ENSDARG00000073857 1226 2.347 - 0.818 - - - 0.721 0.808 - - Kruppel-like factor 7a [Source:ZFIN;Acc:ZDB-GENE-050522-276]
90. clstn3 ENSDARG00000073883 590 2.335 0.721 - - - - 0.726 0.888 - - calsyntenin 3 [Source:ZFIN;Acc:ZDB-GENE-100921-73]
91. si:ch211-152f6.6 si:ch211-152f6.6 278 2.335 0.739 - - - - - 0.893 0.703 -
92. SPOCK1 ENSDARG00000074644 794 2.333 0.709 - - - - 0.757 0.867 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:ZFIN;Acc:ZDB-GENE-110428-1]
93. her8a ENSDARG00000016363 996 2.332 - - - 0.760 - 0.823 0.749 - - hairy-related 8a [Source:ZFIN;Acc:ZDB-GENE-030131-2376]
94. glrbb ENSDARG00000052769, ENSDARG00000113828 467 2.331 - - - 0.731 - 0.738 0.862 - - glycine receptor, beta b [Source:ZFIN;Acc:ZDB-GENE-040801-106]
95. CU856539.1 ENSDARG00000010023 190 2.33 0.717 0.763 - - - - 0.850 - - hippocampus abundant transcript 1 protein-like [Source:NCBI gene;Acc:557306]
96. tle2 5014 2.329 0.729 - - - - 0.757 0.843 - - transducin-like enhancer of split 2 (E(sp1) homolog, Drosophila), transcript variant X4
97. zgc:158291 ENSDARG00000044375, ENSDARG00000111929 621 2.323 0.741 0.782 - - - 0.800 - - - zgc:158291 [Source:ZFIN;Acc:ZDB-GENE-061215-70]
98. kif18a ENSDARG00000008022 546 2.318 0.753 - - 0.782 - 0.783 - - - kinesin family member 18A [Source:ZFIN;Acc:ZDB-GENE-040426-862]
99. RLTPR 1158 2.314 0.719 - - - - 0.713 0.882 - - RGD motif, leucine rich repeats, tropomodulin domain and proline-rich containing, transcript variant X1
100. hmgb1b ENSDARG00000030479 10398 2.311 - - 0.724 - - 0.746 0.841 - - high mobility group box 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8480]

There are 2493 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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