Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for pax2b

Gene Name Gene ID Reads Annotation
pax2b ENSDARG00000032578 12 paired box 2b [Source:ZFIN;Acc:ZDB-GENE-001030-4]










Genes with expression patterns similar to pax2b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pax2b ENSDARG00000032578 12 6 - - 1.000 1.000 1.000 - 1.000 1.000 1.000 paired box 2b [Source:ZFIN;Acc:ZDB-GENE-001030-4]
2. sostdc1a ENSDARG00000068892 127 1.852 - - - - 0.852 - 1.000 - - sclerostin domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-050417-64]
3. CABZ01069022.1 ENSDARG00000105692 16 1.74 - - 0.904 - - - 0.836 - - si:cabz01069022.1 [Source:NCBI gene;Acc:100332864]
4. snx21 ENSDARG00000062770, ENSDARG00000111065 9 1.74 - - 0.904 - - - 0.836 - - sorting nexin family member 21 [Source:ZFIN;Acc:ZDB-GENE-061013-557]
5. irx7 ENSDARG00000002601 72 1.707 - - - - 0.871 - 0.836 - - iroquois homeobox 7 [Source:ZFIN;Acc:ZDB-GENE-020103-1]
6. ZNF337_11 ZNF337_11 11 1.697 - - - - - - 0.836 - 0.861
7. fgf20b ENSDARG00000086070 13 1.671 - - 0.895 - 0.776 - - - - fibroblast growth factor 20b [Source:ZFIN;Acc:ZDB-GENE-060117-5]
8. cacna2d2 cacna2d2 16 1.637 - - 0.801 - - - 0.836 - -
9. BX511270.1 BX511270.1 25 1.621 - - - - - - 0.836 - 0.785
10. prom1b ENSDARG00000034007, ENSDARG00000111216, ENSDARG00000111262 14 1.602 - - - 0.729 0.873 - - - - prominin 1 b [Source:ZFIN;Acc:ZDB-GENE-031003-1]
11. ptprja ENSDARG00000033042 25 1.583 - - 0.747 - - - 0.836 - - protein tyrosine phosphatase, receptor type, J a [Source:ZFIN;Acc:ZDB-GENE-030131-8301]
12. slc43a3a ENSDARG00000059682 27 1.564 - - 0.799 - - - - - 0.765 solute carrier family 43, member 3a [Source:ZFIN;Acc:ZDB-GENE-110208-8]
13. CD81 CD81 67 1.545 - - - - 0.722 - 0.823 - -
14. si:dkey-81p22.11 ENSDARG00000093797 68 1 - - - - - - 1.000 - - si:dkey-81p22.11 [Source:NCBI gene;Acc:100535473]
15. slc5a2 ENSDARG00000100919 47 1 - - - - - - 1.000 - - solute carrier family 5 (sodium/glucose cotransporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2498]
16. helb ENSDARG00000053127 235 1 - - - - - - 1.000 - - helicase (DNA) B [Source:ZFIN;Acc:ZDB-GENE-030729-16]
17. si:dkey-256i11.4 si:dkey-256i11.4 3 1 - - - - - - 1.000 - -
18. cdh10 cdh10 38 1 - - - - - - 1.000 - -
19. celf5 celf5 5 1 - - - - - - 1.000 - -
20. CR391995.1 ENSDARG00000098041 48 1 - - - - 1.000 - - - -
21. CU984579.1 ENSDARG00000116863 15 1 - - - - - - 1.000 - - leucine-rich repeat neuronal protein 4-like [Source:NCBI gene;Acc:564748]
22. asb11 ENSDARG00000056561 39 1 - - - - - - 1.000 - - ankyrin repeat and SOCS box containing 11 [Source:ZFIN;Acc:ZDB-GENE-070112-532]
23. si:dkey-247i3.6 ENSDARG00000092139, ENSDARG00000094308, ENSDARG00000100214 22 0.984 - - - - - - 0.984 - - si:dkey-247i3.6 [Source:ZFIN;Acc:ZDB-GENE-110913-83]
24. si:dkey-26i13.8 ENSDARG00000062606 13 0.974 - - - 0.974 - - - - - si:dkey-26i13.8 [Source:ZFIN;Acc:ZDB-GENE-090312-134]
25. lrrc4.2 ENSDARG00000003020 235 0.97 - - - - - - 0.970 - - leucine rich repeat containing 4.2 [Source:ZFIN;Acc:ZDB-GENE-030131-7997]
26. cyb561 ENSDARG00000038176 55 0.97 - - - - 0.970 - - - - cytochrome b561 [Source:ZFIN;Acc:ZDB-GENE-070713-3]
27. srgap2b srgap2b 80 0.964 - - - - - - 0.964 - -
28. lzts3b ENSDARG00000058558 166 0.961 - - - - - - 0.961 - - leucine zipper, putative tumor suppressor family member 3b [Source:ZFIN;Acc:ZDB-GENE-110411-249]
29. gnl1 ENSDARG00000061789, ENSDARG00000114276 78 0.948 - - - - - - 0.948 - - guanine nucleotide binding protein-like 1 [Source:ZFIN;Acc:ZDB-GENE-060323-1]
30. GPR137B GPR137B 50 0.943 - - - - - - 0.943 - -
31. BX950859.2 BX950859.2 10 0.942 - - - 0.942 - - - - -
32. si:dkey-94e7.2 ENSDARG00000068474 14 0.928 - - - 0.928 - - - - - si:dkey-94e7.2 [Source:ZFIN;Acc:ZDB-GENE-070912-611]
33. evi5a ENSDARG00000077666 1 0.921 - - 0.921 - - - - - - ecotropic viral integration site 5a [Source:ZFIN;Acc:ZDB-GENE-110218-2]
34. tbx1 ENSDARG00000031891 397 0.917 - - - - 0.917 - - - - T-box 1 [Source:ZFIN;Acc:ZDB-GENE-030805-5]
35. OTOF OTOF 195 0.916 - - - - - - 0.916 - -
36. foxl2 61 0.911 - - - - 0.911 - - - - forkhead box L2, transcript variant X1
37. CCDC150 CCDC150 991 0.907 - - - - - - 0.907 - -
38. si:ch73-362m14.4 ENSDARG00000023940 88 0.907 - - - - - - 0.907 - - si:ch73-362m14.4 [Source:ZFIN;Acc:ZDB-GENE-120215-30]
39. tmem44 ENSDARG00000068193 8 0.906 - - 0.906 - - - - - - transmembrane protein 44 [Source:ZFIN;Acc:ZDB-GENE-060825-65]
40. mmd2a ENSDARG00000087446 1 0.906 - - 0.906 - - - - - - monocyte to macrophage differentiation-associated 2a [Source:ZFIN;Acc:ZDB-GENE-081104-52]
41. map3k19 ENSDARG00000094272 59 0.906 - - 0.906 - - - - - - mitogen-activated protein kinase kinase kinase 19 [Source:ZFIN;Acc:ZDB-GENE-081104-140]
42. zgc:153394 zgc:153394 5 0.906 - - 0.906 - - - - - -
43. si:dkey-46g23.5 ENSDARG00000008835 7 0.906 - - 0.906 - - - - - - si:dkey-46g23.5 [Source:ZFIN;Acc:ZDB-GENE-030131-9306]
44. CU459084.1 CU459084.1 4 0.906 - - 0.906 - - - - - -
45. ncs1b ENSDARG00000054186 252 0.906 - - 0.906 - - - - - - neuronal calcium sensor 1b [Source:ZFIN;Acc:ZDB-GENE-050930-1]
46. VASP VASP 22 0.906 - - 0.906 - - - - - -
47. CABZ01044346.1 CABZ01044346.1 12 0.906 - - 0.906 - - - - - -
48. si:dkeyp-20e4.9 si:dkeyp-20e4.9 3 0.906 - - 0.906 - - - - - -
49. si:dkey-183p4.9 si:dkey-183p4.9 1 0.906 - - 0.906 - - - - - -
50. steap4 ENSDARG00000055901 61 0.906 - - 0.906 - - - - - - STEAP family member 4 [Source:ZFIN;Acc:ZDB-GENE-070424-244]
51. ATXN1 ATXN1 12 0.906 - - 0.906 - - - - - -
52. TRIP10_1 TRIP10_1 1 0.906 - - 0.906 - - - - - -
53. TSPAN1 ENSDARG00000052027 4 0.906 - - 0.906 - - - - - - tetraspanin 1 [Source:ZFIN;Acc:ZDB-GENE-070502-5]
54. trhra ENSDARG00000076546 3 0.906 - - 0.906 - - - - - - thyrotropin-releasing hormone receptor a [Source:ZFIN;Acc:ZDB-GENE-100922-18]
55. CR942805.3 CR942805.3 7 0.906 - - 0.906 - - - - - -
56. bnip1a ENSDARG00000078259 2 0.906 - - 0.906 - - - - - - BCL2 interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-081107-44]
57. si:dkeyp-25a3.1 si:dkeyp-25a3.1 4 0.906 - - 0.906 - - - - - -
58. CABZ01086292.1 CABZ01086292.1 1 0.906 - - 0.906 - - - - - -
59. si:ch211-259i2.2 si:ch211-259i2.2 45 0.906 - - 0.906 - - - - - -
60. si:dkeyp-82a1.5 si:dkeyp-82a1.5 6 0.906 - - 0.906 - - - - - -
61. CR383676.3_2 CR383676.3_2 9 0.905 - - 0.905 - - - - - -
62. tnmd ENSDARG00000052615 42 0.905 - - 0.905 - - - - - - tenomodulin [Source:ZFIN;Acc:ZDB-GENE-080220-31]
63. CLNK 8 0.904 - - 0.904 - - - - - - cytokine dependent hematopoietic cell linker
64. si:ch73-166n24.2 si:ch73-166n24.2 1 0.904 - - 0.904 - - - - - -
65. zgc:92249 14 0.904 - - 0.904 - - - - - - zgc:92249
66. CST7 CST7 22 0.904 - - 0.904 - - - - - -
67. CT955987.1 CT955987.1 9 0.904 - - 0.904 - - - - - -
68. DEPDC4 DEPDC4 1 0.904 - - 0.904 - - - - - -
69. snoMe28S-G3255 snoMe28S-G3255 2 0.904 - - 0.904 - - - - - -
70. NRP2 NRP2 5 0.904 - - 0.904 - - - - - -
71. CU570791.1 ENSDARG00000098597 4 0.904 - - 0.904 - - - - - - NACHT and WD repeat domain-containing protein 2-like [Source:NCBI gene;Acc:108179119]
72. cacna1c ENSDARG00000008398 193 0.899 - - - - - - 0.899 - - calcium channel, voltage-dependent, L type, alpha 1C subunit [Source:ZFIN;Acc:ZDB-GENE-020129-1]
73. CAMSAP2 CAMSAP2 109 0.897 - - - 0.897 - - - - -
74. dmbx1a ENSDARG00000009922 284 0.895 - - - - 0.895 - - - - diencephalon/mesencephalon homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-020117-1]
75. phox2a ENSDARG00000007406 470 0.892 - - - - 0.892 - - - - paired-like homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-000223-14]
76. FGFBP1 FGFBP1 7 0.885 - - - - 0.885 - - - -
77. si:ch211-253d24.2 si:ch211-253d24.2 12 0.884 - - - - - - - - 0.884
78. npffr1l2 ENSDARG00000062631 127 0.884 - - - - - - 0.884 - - neuropeptide FF receptor 1 like 2 [Source:ZFIN;Acc:ZDB-GENE-060526-110]
79. si:dkey-7c18.24 ENSDARG00000041433, ENSDARG00000113434, ENSDARG00000116523 89 0.884 - - - - - - 0.884 - - si:dkey-7c18.24 [Source:ZFIN;Acc:ZDB-GENE-041014-63]
80. crmp1 ENSDARG00000056742 332 0.881 - - - - - - 0.881 - - collapsin response mediator protein 1 [Source:ZFIN;Acc:ZDB-GENE-050720-1]
81. tmem37 ENSDARG00000059305 19 0.879 - - - - - - - - 0.879 transmembrane protein 37 [Source:ZFIN;Acc:ZDB-GENE-040426-2208]
82. wu:fb63d05 wu:fb63d05 3 0.879 - - - - - - - - 0.879
83. nif3l1 ENSDARG00000045249 28 0.873 - - - - 0.873 - - - - NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050706-80]
84. EGR4 ENSDARG00000077799 34 0.873 - - - - - - 0.873 - - early growth response 4 [Source:ZFIN;Acc:ZDB-GENE-080204-90]
85. ppp2r2ba 321 0.872 - - - - - - 0.872 - - protein phosphatase 2, regulatory subunit B, beta a, transcript variant X2
86. si:ch211-14a17.6 ENSDARG00000054313, ENSDARG00000116347 12 0.868 - - - 0.868 - - - - - si:ch211-14a17.6 [Source:ZFIN;Acc:ZDB-GENE-030616-589]
87. col17a1b ENSDARG00000079011 143 0.865 - - 0.865 - - - - - - collagen, type XVII, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030131-7145]
88. CABZ01041604.1 ENSDARG00000059854 35 0.865 - - - - - - 0.865 - - E3 ubiquitin-protein ligase RNF182-like [Source:NCBI gene;Acc:797048]
89. CABZ01041769.1 CABZ01041769.1 17 0.865 - - 0.865 - - - - - -
90. lrrc4bb ENSDARG00000014792 47 0.865 - - - - - - 0.865 - - leucine rich repeat containing 4Bb [Source:ZFIN;Acc:ZDB-GENE-091116-44]
91. nr5a1a ENSDARG00000103176 12 0.864 - - 0.864 - - - - - - nuclear receptor subfamily 5, group A, member 1a [Source:ZFIN;Acc:ZDB-GENE-010504-1]
92. st8sia1_1 ENSDARG00000098221 16 0.862 - - - - - - 0.862 - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-051005-1]
93. st8sia7.1 ENSDARG00000054211 34 0.862 - - - - - - - - 0.862 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 7.1 [Source:ZFIN;Acc:ZDB-GENE-090504-4]
94. paqr7a ENSDARG00000100462 15 0.861 - - 0.861 - - - - - - progestin and adipoQ receptor family member VII, a [Source:ZFIN;Acc:ZDB-GENE-070705-346]
95. PLEKHS1_2 PLEKHS1_2 21 0.861 - - 0.861 - - - - - -
96. C5H11orf53 C5H11orf53 3 0.861 - - 0.861 - - - - - -
97. rcvrna ENSDARG00000052223, ENSDARG00000113117 20 0.859 - - - 0.859 - - - - - recoverin a [Source:ZFIN;Acc:ZDB-GENE-050913-106]
98. ATXN3 ENSDARG00000099274 181 0.858 - - - - - - 0.858 - - ataxin 3 [Source:ZFIN;Acc:ZDB-GENE-040426-983]
99. dmrt1 ENSDARG00000007349 16 0.858 - - - - - - - - 0.858 doublesex and mab-3 related transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-050511-1]
100. BX324198.1 BX324198.1 12 0.858 - - - - - - - - 0.858

There are 349 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA