Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for pax1a

Gene Name Gene ID Reads Annotation
pax1a ENSDARG00000008203 150 paired box 1a [Source:ZFIN;Acc:ZDB-GENE-070112-182]










Genes with expression patterns similar to pax1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pax1a ENSDARG00000008203 150 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 paired box 1a [Source:ZFIN;Acc:ZDB-GENE-070112-182]
2. wdr66 ENSDARG00000059855 276 1.654 - 0.928 - - - - - 0.726 - WD repeat domain 66 [Source:ZFIN;Acc:ZDB-GENE-060526-328]
3. sergef ENSDARG00000070986, ENSDARG00000111782 48 1.588 - 0.794 - - - 0.794 - - - secretion regulating guanine nucleotide exchange factor [Source:ZFIN;Acc:ZDB-GENE-061220-11]
4. si:rp71-36n21.1 93 1.582 - - - - - 0.749 0.833 - - si:rp71-36n21.1
5. fam43b ENSDARG00000070222 92 1.557 - 0.794 0.763 - - - - - - family with sequence similarity 43, member B [Source:ZFIN;Acc:ZDB-GENE-040912-11]
6. RNF122 RNF122 29 1.516 - - 0.731 - - 0.785 - - -
7. elna 38 1.511 - - 0.708 - - - 0.803 - - elastin a, transcript variant X20
8. mcm5_1 ENSDARG00000019507 10 1.508 - 0.794 0.714 - - - - - - minichromosome maintenance complex component 5 [Source:ZFIN;Acc:ZDB-GENE-021209-1]
9. CABZ01021538.1 CABZ01021538.1 67 1.495 - 0.794 - - - 0.701 - - -
10. ggt5a ENSDARG00000052045 293 1.49 - 0.723 - - - - 0.767 - - gamma-glutamyltransferase 5a [Source:ZFIN;Acc:ZDB-GENE-080226-1]
11. sostdc1b ENSDARG00000056021, ENSDARG00000114829 33 1.47 - - - - - 0.767 0.703 - - sclerostin domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-060503-653]
12. SLC35A3_1 SLC35A3_1 35 1.468 - - - - - 0.767 - 0.701 -
13. si:ch211-224b1.5 si:ch211-224b1.5 139 1.463 - 0.702 - - - - 0.761 - -
14. si:dkey-152b24.7 ENSDARG00000099715 26 1.458 - - - - - - 0.752 0.706 - si:dkey-152b24.7 [Source:ZFIN;Acc:ZDB-GENE-100921-77]
15. golga2 ENSDARG00000063197 30 1 - 1.000 - - - - - - - golgin A2 [Source:ZFIN;Acc:ZDB-GENE-081030-1]
16. SH2D1B SH2D1B 60 1 - 1.000 - - - - - - -
17. cacng8b ENSDARG00000070626 176 1 - 1.000 - - - - - - - calcium channel, voltage-dependent, gamma subunit 8b [Source:ZFIN;Acc:ZDB-GENE-100921-72]
18. URB1 ENSDARG00000060308 78 0.989 - 0.989 - - - - - - - URB1 ribosome biogenesis 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5181]
19. CABZ01054396.1 CABZ01054396.1 139 0.983 - 0.983 - - - - - - -
20. tenm1 ENSDARG00000003403 148 0.941 - - - - - - 0.941 - - teneurin transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-060531-26]
21. pmvk ENSDARG00000070798, ENSDARG00000109348 76 0.939 - 0.939 - - - - - - - phosphomevalonate kinase [Source:ZFIN;Acc:ZDB-GENE-070410-91]
22. fam5ca fam5ca 76 0.937 - 0.937 - - - - - - -
23. PRKAR2B ENSDARG00000036446 812 0.937 - 0.937 - - - - - - - protein kinase cAMP-dependent type II regulatory subunit beta [Source:HGNC Symbol;Acc:HGNC:9392]
24. SNORD52 SNORD52 23 0.937 - 0.937 - - - - - - -
25. si:dkey-222f8.6 si:dkey-222f8.6 7 0.937 - 0.937 - - - - - - -
26. zgc:174260 ENSDARG00000091800, ENSDARG00000116307 10 0.937 - 0.937 - - - - - - - zgc:174260 [Source:ZFIN;Acc:ZDB-GENE-080213-9]
27. phkg1b ENSDARG00000069498 43 0.937 - 0.937 - - - - - - - phosphorylase kinase, gamma 1b (muscle) [Source:ZFIN;Acc:ZDB-GENE-050522-52]
28. pgr ENSDARG00000035966 10 0.937 - 0.937 - - - - - - - progesterone receptor [Source:ZFIN;Acc:ZDB-GENE-990415-214]
29. wnt7bb ENSDARG00000071107 1158 0.937 - 0.937 - - - - - - - wingless-type MMTV integration site family, member 7Bb [Source:ZFIN;Acc:ZDB-GENE-081006-1]
30. diaph3 ENSDARG00000090785 16 0.937 - 0.937 - - - - - - - diaphanous-related formin 3 [Source:ZFIN;Acc:ZDB-GENE-040801-144]
31. fgf8a ENSDARG00000003399 580 0.937 - 0.937 - - - - - - - fibroblast growth factor 8a [Source:ZFIN;Acc:ZDB-GENE-990415-72]
32. si:dkey-228c11.4 si:dkey-228c11.4 5 0.937 - 0.937 - - - - - - -
33. ppp1r27 ppp1r27 18 0.937 - 0.937 - - - - - - -
34. eng2a eng2a 186 0.937 - 0.937 - - - - - - -
35. pigm ENSDARG00000024277 86 0.937 - 0.937 - - - - - - - phosphatidylinositol glycan anchor biosynthesis, class M [Source:ZFIN;Acc:ZDB-GENE-040426-1393]
36. TRIOBP TRIOBP 92 0.929 - 0.929 - - - - - - -
37. si:ch211-141o9.10 ENSDARG00000077900 98 0.927 - 0.927 - - - - - - - si:ch211-141o9.10 [Source:ZFIN;Acc:ZDB-GENE-130603-5]
38. fgf1b ENSDARG00000042811 102 0.923 - 0.923 - - - - - - - fibroblast growth factor 1b [Source:ZFIN;Acc:ZDB-GENE-071004-7]
39. CU856681.1 CU856681.1 7 0.915 - 0.915 - - - - - - -
40. C3H16orf89 C3H16orf89 449 0.913 - - - - - - 0.913 - -
41. bmf2 ENSDARG00000041414, ENSDARG00000116024 18 0.911 0.911 - - - - - - - - BCL2 modifying factor 2 [Source:ZFIN;Acc:ZDB-GENE-041210-319]
42. FAM120A ENSDARG00000075021 73 0.911 - 0.911 - - - - - - - family with sequence similarity 120A [Source:ZFIN;Acc:ZDB-GENE-110131-10]
43. BX548170.1 ENSDARG00000097874 25 0.911 0.911 - - - - - - - -
44. carf ENSDARG00000019950 303 0.911 0.911 - - - - - - - - calcium responsive transcription factor [Source:ZFIN;Acc:ZDB-GENE-070912-172]
45. TMPRSS5 ENSDARG00000087717 54 0.908 - - - - - - 0.908 - - transmembrane serine protease 5 [Source:ZFIN;Acc:ZDB-GENE-131121-184]
46. rnf34b ENSDARG00000054036 121 0.904 - 0.904 - - - - - - - ring finger protein 34b [Source:ZFIN;Acc:ZDB-GENE-071004-31]
47. PARP14 PARP14 164 0.898 - - - - - - 0.898 - -
48. lrrc42 ENSDARG00000030591 156 0.891 - 0.891 - - - - - - - leucine rich repeat containing 42 [Source:ZFIN;Acc:ZDB-GENE-030131-4992]
49. NBL1 428 0.89 - 0.890 - - - - - - - neuroblastoma 1, DAN family BMP antagonist
50. HRASLS ENSDARG00000100021 16 0.881 0.881 - - - - - - - - HRAS-like suppressor [Source:ZFIN;Acc:ZDB-GENE-040718-330]
51. UIMC1_1 UIMC1_1 430 0.875 0.875 - - - - - - - -
52. flt1 ENSDARG00000019371, ENSDARG00000111797 128 0.874 - 0.874 - - - - - - - fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor) [Source:ZFIN;Acc:ZDB-GENE-050407-1]
53. CU855815.2 CU855815.2 80 0.871 0.871 - - - - - - - -
54. CR848814.2 CR848814.2 19 0.861 - - - - - 0.861 - - -
55. si:ch211-95j8.3 ENSDARG00000092580 20 0.859 - - - - - 0.859 - - - si:ch211-95j8.3 [Source:ZFIN;Acc:ZDB-GENE-091204-307]
56. cyr61l1 ENSDARG00000035422, ENSDARG00000112039, ENSDARG00000114683 332 0.859 - - - - - - 0.859 - - cysteine-rich, angiogenic inducer 61 like 1 [Source:ZFIN;Acc:ZDB-GENE-050417-136]
57. esm1 ENSDARG00000104370 186 0.858 - - - - - - 0.858 - - endothelial cell-specific molecule 1 [Source:ZFIN;Acc:ZDB-GENE-060929-748]
58. RBM33_1 RBM33_1 7 0.858 - - 0.858 - - - - - -
59. si:dkey-30j22.1 ENSDARG00000042829 25 0.856 0.856 - - - - - - - - si:dkey-30j22.1 [Source:ZFIN;Acc:ZDB-GENE-041001-184]
60. mrm1 ENSDARG00000059658 38 0.851 - - - - - 0.851 - - - mitochondrial rRNA methyltransferase 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060526-229]
61. rsad1 ENSDARG00000077698, ENSDARG00000112179 93 0.848 - - - - - 0.848 - - - radical S-adenosyl methionine domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2508]
62. anxa5a ENSDARG00000026406 19 0.848 - - - - - - 0.848 - - annexin A5a [Source:ZFIN;Acc:ZDB-GENE-080220-29]
63. CR855387.1 CR855387.1 41 0.848 - - - - - 0.848 - - -
64. kcnh7 ENSDARG00000062687 172 0.848 - 0.848 - - - - - - - potassium channel, voltage gated eag related subfamily H, member 7 [Source:ZFIN;Acc:ZDB-GENE-120214-39]
65. CR388416.1 CR388416.1 3 0.848 - - - - - - 0.848 - -
66. gja3 ENSDARG00000021889, ENSDARG00000116798 49 0.848 - - - - - - 0.848 - - gap junction protein, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-031217-3]
67. scara3 ENSDARG00000008060 169 0.845 - - - - - - 0.845 - - scavenger receptor class A, member 3 [Source:ZFIN;Acc:ZDB-GENE-041014-317]
68. ppp2r2ba 321 0.845 - 0.845 - - - - - - - protein phosphatase 2, regulatory subunit B, beta a, transcript variant X2
69. CHCHD4 CHCHD4 185 0.843 - 0.843 - - - - - - -
70. si:ch1073-322p19.1 ENSDARG00000075173 204 0.842 - 0.842 - - - - - - - si:ch1073-322p19.1 [Source:ZFIN;Acc:ZDB-GENE-091204-224]
71. styxl1 ENSDARG00000026338 29 0.841 - - 0.841 - - - - - - serine/threonine/tyrosine interacting-like 1 [Source:ZFIN;Acc:ZDB-GENE-040912-45]
72. sema3bl ENSDARG00000007560, ENSDARG00000110211 30 0.835 - - - - - - 0.835 - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3bl [Source:ZFIN;Acc:ZDB-GENE-030131-2956]
73. map3k7cl ENSDARG00000069143 130 0.834 - - - - - - 0.834 - - map3k7 C-terminal like [Source:ZFIN;Acc:ZDB-GENE-091204-239]
74. chd3 ENSDARG00000021405, ENSDARG00000115235 17 0.833 - - - - - - 0.833 - - chromodomain helicase DNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-121031-4]
75. si:dkey-68l7.1 si:dkey-68l7.1 159 0.832 - 0.832 - - - - - - -
76. si:ch211-229g14.3 ENSDARG00000095101 5 0.832 - - - - - 0.832 - - - si:ch211-229g14.3 [Source:ZFIN;Acc:ZDB-GENE-081104-187]
77. DACT3_1 DACT3_1 1235 0.831 - 0.831 - - - - - - -
78. cftr ENSDARG00000041107, ENSDARG00000110312 56 0.831 - - - - - - 0.831 - - cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7) [Source:ZFIN;Acc:ZDB-GENE-050517-20]
79. map4k2l map4k2l 248 0.83 - 0.830 - - - - - - -
80. pdgfrl ENSDARG00000006456, ENSDARG00000116983 1020 0.83 - - - - - - 0.830 - - platelet-derived growth factor receptor-like [Source:ZFIN;Acc:ZDB-GENE-040426-901]
81. znf106b ENSDARG00000091947 108 0.828 - - - - - 0.828 - - - zinc finger protein 106b [Source:ZFIN;Acc:ZDB-GENE-091118-24]
82. pax7b ENSDARG00000070818 282 0.827 - - - - - - 0.827 - - paired box 7b [Source:ZFIN;Acc:ZDB-GENE-080917-54]
83. polr3b ENSDARG00000062915, ENSDARG00000113895 144 0.824 0.824 - - - - - - - - polymerase (RNA) III (DNA directed) polypeptide B [Source:ZFIN;Acc:ZDB-GENE-030131-2887]
84. casc1 ENSDARG00000016815 99 0.823 0.823 - - - - - - - - cancer susceptibility candidate 1 [Source:ZFIN;Acc:ZDB-GENE-041210-153]
85. LAYN LAYN 94 0.82 - - - - - 0.820 - - -
86. prmt3 ENSDARG00000019791 268 0.82 - - - - - 0.820 - - - protein arginine methyltransferase 3 [Source:ZFIN;Acc:ZDB-GENE-041105-1]
87. egf ENSDARG00000052739, ENSDARG00000114581 141 0.818 0.818 - - - - - - - - epidermal growth factor [Source:ZFIN;Acc:ZDB-GENE-070922-1]
88. COLQ ENSDARG00000019692 164 0.817 0.817 - - - - - - - - collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase [Source:ZFIN;Acc:ZDB-GENE-110411-119]
89. foxg1a ENSDARG00000070769 928 0.816 - - - - - - 0.816 - - forkhead box G1a [Source:ZFIN;Acc:ZDB-GENE-990415-267]
90. mylk2 ENSDARG00000031698 135 0.814 - - - - - 0.814 - - - myosin light chain kinase 2 [Source:ZFIN;Acc:ZDB-GENE-080616-2]
91. BX247898.1 BX247898.1 75 0.813 - - - - - 0.813 - - -
92. C18H15orf38 C18H15orf38 370 0.812 - - - - - - - 0.812 -
93. SLC26A6 ENSDARG00000055835, ENSDARG00000097292 62 0.812 - - - - - - 0.812 - - solute carrier family 26, member 6 [Source:ZFIN;Acc:ZDB-GENE-081105-83]
94. nfe2l1a ENSDARG00000030616, ENSDARG00000116760 68 0.811 - - - - - 0.811 - - - nuclear factor, erythroid 2-like 1a [Source:ZFIN;Acc:ZDB-GENE-040630-5]
95. tcf19l ENSDARG00000040036 369 0.81 - 0.810 - - - - - - - transcription factor 19 (SC1), like [Source:ZFIN;Acc:ZDB-GENE-060324-2]
96. PEG3_12 PEG3_12 128 0.809 - 0.809 - - - - - - -
97. OSCP1 ENSDARG00000101888 59 0.809 - 0.809 - - - - - - - organic solute carrier partner 1 [Source:HGNC Symbol;Acc:HGNC:29971]
98. id2b ENSDARG00000029544 380 0.808 - - - - - - 0.808 - - inhibitor of DNA binding 2b [Source:ZFIN;Acc:ZDB-GENE-030131-15]
99. TECPR1 TECPR1 173 0.808 - - - - - - 0.808 - -
100. mrps22_1 ENSDARG00000018073, ENSDARG00000115927 104 0.807 0.807 - - - - - - - - mitochondrial ribosomal protein S22 [Source:ZFIN;Acc:ZDB-GENE-070615-31]

There are 648 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA