Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for patl1

Gene Name Gene ID Reads Annotation
patl1 ENSDARG00000017423 2744 protein associated with topoisomerase II homolog 1 (yeast) [Source:ZFIN;Acc:ZDB-GENE-070209-83]










Genes with expression patterns similar to patl1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. patl1 ENSDARG00000017423 2744 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 protein associated with topoisomerase II homolog 1 (yeast) [Source:ZFIN;Acc:ZDB-GENE-070209-83]
2. cpt1a cpt1a 674 2.668 0.844 0.949 - - 0.875 - - - -
3. strada ENSDARG00000037929 1614 2.54 0.887 - - - 0.894 - 0.759 - - ste20-related kinase adaptor alpha [Source:ZFIN;Acc:ZDB-GENE-030131-6482]
4. hbegfa ENSDARG00000075121 1865 2.503 - 0.961 - - 0.775 0.767 - - - heparin-binding EGF-like growth factor a [Source:ZFIN;Acc:ZDB-GENE-080204-119]
5. parp1 ENSDARG00000019529 6787 2.447 - 0.939 - 0.801 - - - - 0.707 poly (ADP-ribose) polymerase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3955]
6. srsf9 ENSDARG00000008097 2405 2.401 0.860 - - - 0.756 0.785 - - - serine/arginine-rich splicing factor 9 [Source:ZFIN;Acc:ZDB-GENE-040426-2397]
7. arid4a ENSDARG00000043873 4176 2.387 - 0.956 - - 0.721 - 0.710 - - AT rich interactive domain 4A (RBP1-like) [Source:ZFIN;Acc:ZDB-GENE-050809-105]
8. cks1b ENSDARG00000007971 2739 2.353 0.793 - - - - - 0.782 - 0.778 CDC28 protein kinase regulatory subunit 1B [Source:ZFIN;Acc:ZDB-GENE-040801-112]
9. itpkcb ENSDARG00000067741 2370 2.327 0.851 - - - 0.751 0.725 - - - inositol-trisphosphate 3-kinase Cb [Source:ZFIN;Acc:ZDB-GENE-080225-27]
10. max ENSDARG00000024844 6035 2.294 - - - - 0.806 - 0.769 - 0.719 myc associated factor X [Source:ZFIN;Acc:ZDB-GENE-990415-152]
11. lrp5 ENSDARG00000006921 3522 1.934 - 0.936 - 0.998 - - - - - low density lipoprotein receptor-related protein 5 [Source:ZFIN;Acc:ZDB-GENE-050518-2]
12. galnt10 ENSDARG00000103825 320 1.839 0.868 0.971 - - - - - - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10) [Source:ZFIN;Acc:ZDB-GENE-030131-595]
13. prkci ENSDARG00000021225 2472 1.816 0.862 0.954 - - - - - - - protein kinase C, iota [Source:ZFIN;Acc:ZDB-GENE-011105-1]
14. pafah1b1b ENSDARG00000026595 1822 1.812 - 0.987 - - 0.825 - - - - platelet-activating factor acetylhydrolase 1b, regulatory subunit 1b [Source:ZFIN;Acc:ZDB-GENE-040116-3]
15. CABZ01111604.1 CABZ01111604.1 140 1.808 0.842 0.966 - - - - - - -
16. fmnl2b ENSDARG00000075041 1744 1.798 0.827 0.971 - - - - - - - formin-like 2b [Source:ZFIN;Acc:ZDB-GENE-041111-182]
17. galnt12 ENSDARG00000055490 1653 1.795 0.847 0.948 - - - - - - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 [Source:ZFIN;Acc:ZDB-GENE-060503-704]
18. PGAP3 ENSDARG00000057531, ENSDARG00000112574 2046 1.794 - 0.964 - - 0.830 - - - - post-GPI attachment to proteins 3 [Source:ZFIN;Acc:ZDB-GENE-080204-27]
19. gna11b ENSDARG00000053326 5118 1.789 - - - 0.997 - - 0.792 - - guanine nucleotide binding protein (G protein), alpha 11b (Gq class) [Source:ZFIN;Acc:ZDB-GENE-041121-9]
20. st8sia2 ENSDARG00000018788 2183 1.789 - 0.963 - - 0.826 - - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-020919-4]
21. skia ENSDARG00000042151 1850 1.783 - 0.954 - - 0.829 - - - - v-ski avian sarcoma viral oncogene homolog a [Source:ZFIN;Acc:ZDB-GENE-990715-9]
22. csnk1db ENSDARG00000006125 2581 1.781 - 0.953 - - 0.828 - - - - casein kinase 1, delta b [Source:ZFIN;Acc:ZDB-GENE-040426-2385]
23. hcls1 ENSDARG00000012729 1547 1.773 - 0.964 - - 0.809 - - - - hematopoietic cell-specific Lyn substrate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7191]
24. seh1l ENSDARG00000004280 2915 1.773 - 0.958 - - 0.815 - - - - SEH1-like (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-6689]
25. znf503 ENSDARG00000018492 5974 1.773 0.813 0.960 - - - - - - - zinc finger protein 503 [Source:ZFIN;Acc:ZDB-GENE-031113-5]
26. psma4 ENSDARG00000045928 5112 1.765 - 0.936 - - 0.829 - - - - proteasome subunit alpha 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1932]
27. thoc3 ENSDARG00000056517 909 1.757 0.861 - - - 0.896 - - - - THO complex 3 [Source:ZFIN;Acc:ZDB-GENE-040808-14]
28. si:rp71-61h23.4 1921 1.754 0.788 0.966 - - - - - - - si:rp71-61h23.4
29. nusap1 ENSDARG00000002403 6953 1.747 - 0.982 - - - - 0.765 - - nucleolar and spindle associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030827-5]
30. hmgb1a ENSDARG00000099175, ENSDARG00000114353 17231 1.741 - 0.848 - 0.893 - - - - - high mobility group box 1a [Source:ZFIN;Acc:ZDB-GENE-030131-341]
31. rnaseh2a ENSDARG00000018891 1979 1.734 0.845 - - - 0.889 - - - - ribonuclease H2, subunit A [Source:ZFIN;Acc:ZDB-GENE-040426-976]
32. cyp2aa9 ENSDARG00000098890 839 1.731 0.752 0.979 - - - - - - - cytochrome P450, family 2, subfamily AA, polypeptide 9 [Source:ZFIN;Acc:ZDB-GENE-080724-3]
33. ctbp1 ENSDARG00000057007, ENSDARG00000115804 5795 1.725 0.790 0.935 - - - - - - - C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]
34. dip2ba ENSDARG00000005350, ENSDARG00000111011, ENSDARG00000111214 1640 1.719 0.911 - - - 0.808 - - - - disco-interacting protein 2 homolog Ba [Source:ZFIN;Acc:ZDB-GENE-040426-2305]
35. ammecr1 ENSDARG00000012892 14475 1.714 - - - 0.989 - 0.725 - - - Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 homolog (human) [Source:ZFIN;Acc:ZDB-GENE-040426-1533]
36. arhgap1 ENSDARG00000024324 6904 1.711 - - - 0.997 0.714 - - - - Rho GTPase activating protein 1 [Source:ZFIN;Acc:ZDB-GENE-050417-305]
37. ppp1caa ENSDARG00000003486, ENSDARG00000115977 5931 1.71 - - - 0.997 0.713 - - - - protein phosphatase 1, catalytic subunit, alpha isozyme a [Source:ZFIN;Acc:ZDB-GENE-040516-3]
38. PIK3CA_1 PIK3CA_1 4065 1.71 0.872 - - - 0.838 - - - -
39. ube2g1b ENSDARG00000069527 5376 1.703 - - - 0.999 - - 0.704 - - ubiquitin-conjugating enzyme E2G 1b (UBC7 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-2939]
40. CABZ01034848.1 CABZ01034848.1 9936 1.702 - - - 0.996 0.706 - - - -
41. si:dkeyp-44a8.2 ENSDARG00000092493 8308 1.696 - - - 0.995 - - - - 0.701 si:dkeyp-44a8.2 [Source:ZFIN;Acc:ZDB-GENE-070705-542]
42. sqstm1 ENSDARG00000075014 2392 1.693 0.861 0.832 - - - - - - - sequestosome 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2204]
43. eif3i ENSDARG00000017445 21149 1.691 - - - 0.977 - - 0.714 - - eukaryotic translation initiation factor 3, subunit I [Source:ZFIN;Acc:ZDB-GENE-040426-1922]
44. her2 ENSDARG00000038205 3219 1.686 - 0.952 - - 0.734 - - - - hairy-related 2 [Source:ZFIN;Acc:ZDB-GENE-980526-274]
45. zfand3 ENSDARG00000052833 2682 1.683 - 0.897 - - 0.786 - - - - zinc finger, AN1-type domain 3 [Source:ZFIN;Acc:ZDB-GENE-050706-134]
46. vgll4b ENSDARG00000103730 5266 1.681 - 0.931 - - - - 0.750 - - vestigial-like family member 4b [Source:ZFIN;Acc:ZDB-GENE-040426-2445]
47. emc7 ENSDARG00000012144 1608 1.679 0.742 0.937 - - - - - - - ER membrane protein complex subunit 7 [Source:ZFIN;Acc:ZDB-GENE-041001-170]
48. adob ENSDARG00000053571 846 1.677 - 0.930 - - - 0.747 - - - 2-aminoethanethiol (cysteamine) dioxygenase b [Source:ZFIN;Acc:ZDB-GENE-040426-2267]
49. srsf3a ENSDARG00000025397, ENSDARG00000100815 11622 1.668 - 0.875 - - - - 0.793 - - serine/arginine-rich splicing factor 3a [Source:ZFIN;Acc:ZDB-GENE-030616-631]
50. znf346 ENSDARG00000060695 3942 1.666 - 0.928 - - - - 0.738 - - zinc finger protein 346 [Source:ZFIN;Acc:ZDB-GENE-070209-152]
51. gcm2 ENSDARG00000045413 417 1.666 0.748 0.918 - - - - - - - glial cells missing homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050127-1]
52. hmg20b ENSDARG00000042045, ENSDARG00000116536 2638 1.663 0.872 - - - 0.791 - - - - high mobility group 20B [Source:ZFIN;Acc:ZDB-GENE-030131-4258]
53. nhp2 ENSDARG00000069422 9925 1.662 - 0.932 - - - - 0.730 - - NHP2 ribonucleoprotein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-533]
54. C1H4orf27 C1H4orf27 1961 1.657 0.841 - - - 0.816 - - - -
55. zbtb10 ENSDARG00000077101 8683 1.653 - 0.920 - - - 0.733 - - - zinc finger and BTB domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-030429-10]
56. plekhj1 ENSDARG00000025593 696 1.65 - - - - 0.829 0.821 - - - pleckstrin homology domain containing, family J member 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2480]
57. rsrc2 ENSDARG00000042534 1756 1.647 0.852 - - - - - 0.795 - - arginine/serine-rich coiled-coil 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2457]
58. si:dkey-147f3.4_1 ENSDARG00000071029, ENSDARG00000092077 2259 1.641 - 0.937 - - - - 0.704 - - si:dkey-147f3.4 [Source:ZFIN;Acc:ZDB-GENE-061009-29]
59. rspry1 ENSDARG00000062558 1424 1.634 0.847 - - - 0.787 - - - - ring finger and SPRY domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-061026-2]
60. uqcrfs1_1 ENSDARG00000007745 2687 1.627 - 0.824 - - 0.803 - - - - ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2060]
61. sec24c ENSDARG00000103516 1575 1.624 - - - - 0.905 0.719 - - - SEC24 homolog C, COPII coat complex component [Source:ZFIN;Acc:ZDB-GENE-030131-4487]
62. ube2f ENSDARG00000025754 1946 1.614 - - - - 0.846 - 0.768 - - ubiquitin-conjugating enzyme E2F (putative) [Source:ZFIN;Acc:ZDB-GENE-040426-2557]
63. mlf2 ENSDARG00000034616, ENSDARG00000110660 14039 1.614 - 0.840 - - - - 0.774 - - myeloid leukemia factor 2 [Source:ZFIN;Acc:ZDB-GENE-050913-67]
64. ST7 ENSDARG00000039960, ENSDARG00000112691 2020 1.612 0.782 - - - 0.830 - - - - suppression of tumorigenicity 7 [Source:ZFIN;Acc:ZDB-GENE-060421-2807]
65. DALRD3 ENSDARG00000068602 3062 1.61 - 0.870 - - - 0.740 - - - DALR anticodon binding domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-061103-415]
66. arpp19b ENSDARG00000039880 4823 1.598 - 0.869 - - - - 0.729 - - cAMP-regulated phosphoprotein 19b [Source:ZFIN;Acc:ZDB-GENE-040426-930]
67. mlec ENSDARG00000059630 2057 1.595 - - - - 0.817 0.778 - - - malectin [Source:ZFIN;Acc:ZDB-GENE-081105-187]
68. GATAD2B ENSDARG00000005834 3855 1.595 0.894 - - - - - 0.701 - - GATA zinc finger domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-060503-655]
69. TSG101 TSG101 1686 1.592 0.819 - - - 0.773 - - - -
70. lsm4 ENSDARG00000023852 6083 1.591 - 0.837 - - - - - 0.754 - LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-040426-1652]
71. kpnb1 ENSDARG00000104889 9282 1.586 - 0.863 - - - - - - 0.723 karyopherin (importin) beta 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2579]
72. ktn1 ENSDARG00000032802 6251 1.581 - 0.869 - - - - 0.712 - - kinectin 1 [Source:ZFIN;Acc:ZDB-GENE-030408-4]
73. Sep-02 Sep-02 10074 1.578 - 0.780 - - - - 0.798 - -
74. ube2i2 ube2i2 4828 1.574 0.757 - - - - - 0.817 - -
75. dut ENSDARG00000106529 3120 1.573 - - - - 0.821 - 0.752 - - deoxyuridine triphosphatase [Source:ZFIN;Acc:ZDB-GENE-041010-93]
76. blcap ENSDARG00000052073 8646 1.568 - 0.793 - - - - 0.775 - - bladder cancer associated protein [Source:ZFIN;Acc:ZDB-GENE-000330-7]
77. TNRC6B ENSDARG00000074161 2464 1.565 - - - - 0.847 - 0.718 - - trinucleotide repeat containing 6b [Source:ZFIN;Acc:ZDB-GENE-030131-13]
78. eif3ea ENSDARG00000090697 14670 1.558 - - - - 0.736 - 0.822 - - eukaryotic translation initiation factor 3, subunit E, a [Source:ZFIN;Acc:ZDB-GENE-030131-3827]
79. akirin2 ENSDARG00000058729 13245 1.557 - - - - - 0.796 0.761 - - akirin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2944]
80. caprin1b ENSDARG00000054272 7033 1.555 - 0.739 - - - - 0.816 - - cell cycle associated protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2020]
81. lmnb1 ENSDARG00000044299 9817 1.553 - 0.759 - - - - 0.794 - - lamin B1 [Source:ZFIN;Acc:ZDB-GENE-020424-2]
82. ncoa2 ENSDARG00000017929 2520 1.553 0.763 - - - - 0.790 - - - nuclear receptor coactivator 2 [Source:ZFIN;Acc:ZDB-GENE-010406-3]
83. ppig ENSDARG00000044431 3427 1.545 - - - - 0.767 - 0.778 - - peptidylprolyl isomerase G (cyclophilin G) [Source:ZFIN;Acc:ZDB-GENE-040426-2822]
84. pi4k2b ENSDARG00000013881 1337 1.538 - - - - 0.829 0.709 - - - phosphatidylinositol 4-kinase type 2 beta [Source:ZFIN;Acc:ZDB-GENE-070112-990]
85. rab5b ENSDARG00000016059, ENSDARG00000114966 1252 1.537 0.810 - - - - 0.727 - - - RAB5B, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040426-2593]
86. mrpl40 ENSDARG00000043554 2198 1.536 - - - - 0.773 - 0.763 - - mitochondrial ribosomal protein L40 [Source:ZFIN;Acc:ZDB-GENE-040912-37]
87. zgc:91910 ENSDARG00000035678 6172 1.53 0.720 - - - - - 0.810 - - zgc:91910 [Source:ZFIN;Acc:ZDB-GENE-040808-48]
88. rhoaa ENSDARG00000026845 6900 1.527 - 0.819 - - - - - - 0.708 ras homolog gene family, member Aa [Source:ZFIN;Acc:ZDB-GENE-040426-2150]
89. chuk ENSDARG00000011662 1668 1.524 - - - - 0.800 0.724 - - - conserved helix-loop-helix ubiquitous kinase [Source:ZFIN;Acc:ZDB-GENE-040426-1069]
90. uchl5 ENSDARG00000103404, ENSDARG00000110434 4029 1.523 - - - - 0.746 - 0.777 - - ubiquitin carboxyl-terminal hydrolase L5 [Source:ZFIN;Acc:ZDB-GENE-040426-2051]
91. gpx1a ENSDARG00000018146, ENSDARG00000114736 4652 1.506 0.774 - - - 0.732 - - - - glutathione peroxidase 1a [Source:ZFIN;Acc:ZDB-GENE-030410-1]
92. elf2b ENSDARG00000079626, ENSDARG00000117064 3057 1.505 0.785 - - - - - 0.720 - - E74-like factor 2b (ets domain transcription factor) [Source:ZFIN;Acc:ZDB-GENE-031215-1]
93. polr2d ENSDARG00000076509 3386 1.505 - - - - 0.712 - 0.793 - - polymerase (RNA) II (DNA directed) polypeptide D [Source:ZFIN;Acc:ZDB-GENE-040714-2]
94. CABZ01073174.1 CABZ01073174.1 581 1.503 0.759 - - - - 0.744 - - -
95. prkacaa ENSDARG00000100349 2711 1.5 - - - - 0.753 - 0.747 - - protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a [Source:ZFIN;Acc:ZDB-GENE-050114-6]
96. smarcd1 ENSDARG00000019004 6028 1.497 0.786 - - - - 0.711 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1835]
97. hnrnpd ENSDARG00000059246, ENSDARG00000109297, ENSDARG00000113453 3440 1.485 - - - - 0.771 - 0.714 - - heterogeneous nuclear ribonucleoprotein D [Source:ZFIN;Acc:ZDB-GENE-070424-97]
98. pdap1a ENSDARG00000092546, ENSDARG00000116115 7617 1.484 - - - - - - 0.742 - 0.742 pdgfa associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1693]
99. polr3e ENSDARG00000037358 1864 1.484 0.711 - - - 0.773 - - - - polymerase (RNA) III (DNA directed) polypeptide E [Source:ZFIN;Acc:ZDB-GENE-030131-8462]
100. si:dkey-9i23.11 si:dkey-9i23.11 3818 1.481 0.749 - - - 0.732 - - - -

There are 1500 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA