Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for parp1

Gene Name Gene ID Reads Annotation
parp1 ENSDARG00000019529 6787 poly (ADP-ribose) polymerase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3955]










Genes with expression patterns similar to parp1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. parp1 ENSDARG00000019529 6787 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 poly (ADP-ribose) polymerase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3955]
2. TAF15 ENSDARG00000070019 5102 3.901 0.772 - 0.817 - 0.744 - - 0.708 0.860 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-061215-102]
3. snrpc ENSDARG00000009871 9567 3.335 0.782 - - - - 0.970 - 0.714 0.869 small nuclear ribonucleoprotein polypeptide C [Source:ZFIN;Acc:ZDB-GENE-020419-26]
4. hmgb1a ENSDARG00000099175, ENSDARG00000114353 17231 3.15 - 0.841 - 0.701 - - - 0.739 0.869 high mobility group box 1a [Source:ZFIN;Acc:ZDB-GENE-030131-341]
5. tia1 ENSDARG00000052536, ENSDARG00000114478 4392 3.108 - - 0.829 - 0.706 - - 0.720 0.853 TIA1 cytotoxic granule-associated RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-1506]
6. fam60al 2846 2.929 0.711 - 0.731 - 0.751 - - - 0.736 family with sequence similarity 60, member A, like
7. negr1 ENSDARG00000021607 1051 2.892 0.723 - 0.721 - 0.701 - - - 0.747 neuronal growth regulator 1 [Source:ZFIN;Acc:ZDB-GENE-040822-27]
8. tcf7l1a ENSDARG00000038159 2288 2.633 - 0.839 0.797 - - 0.997 - - - transcription factor 7 like 1a [Source:ZFIN;Acc:ZDB-GENE-980605-30]
9. plagx ENSDARG00000036855 3768 2.62 - - 0.787 - 0.843 0.990 - - - pleiomorphic adenoma gene X [Source:ZFIN;Acc:ZDB-GENE-030131-839]
10. hmgb2b ENSDARG00000053990 11519 2.548 0.724 - - - - 0.973 - - 0.851 high mobility group box 2b [Source:ZFIN;Acc:ZDB-GENE-040912-122]
11. cdh2 ENSDARG00000018693, ENSDARG00000117201 9869 2.53 0.775 - - - - 0.967 - - 0.788 cadherin 2, type 1, N-cadherin (neuronal) [Source:ZFIN;Acc:ZDB-GENE-990415-171]
12. wdr5 ENSDARG00000016903 4834 2.497 - - 0.757 - - 0.993 - - 0.747 WD repeat domain 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2082]
13. kpnb1 ENSDARG00000104889 9282 2.454 - 0.805 0.764 - - - - - 0.885 karyopherin (importin) beta 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2579]
14. patl1 ENSDARG00000017423 2744 2.447 - 0.939 - 0.801 - - - - 0.707 protein associated with topoisomerase II homolog 1 (yeast) [Source:ZFIN;Acc:ZDB-GENE-070209-83]
15. tmpob ENSDARG00000022978 8121 2.442 0.759 - 0.902 - - - - - 0.781 thymopoietin b [Source:ZFIN;Acc:ZDB-GENE-050522-8]
16. ncoa5 ENSDARG00000016345 5765 2.427 - 0.948 - - 0.757 - - - 0.722 nuclear receptor coactivator 5 [Source:ZFIN;Acc:ZDB-GENE-040912-155]
17. ENDOD1_5 ENDOD1_5 8723 2.426 0.827 - 0.849 - 0.750 - - - -
18. hmgb3a ENSDARG00000056725 15668 2.401 0.837 - - - 0.768 - - - 0.796 high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
19. tuba1c ENSDARG00000055216 8384 2.376 0.819 - - - 0.747 - - - 0.810 tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
20. lrrn1 ENSDARG00000060115, ENSDARG00000115960 5175 2.363 0.735 - - - - - - 0.762 0.866 leucine rich repeat neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-071126-1]
21. nrarpa ENSDARG00000091419, ENSDARG00000111485 7867 2.36 0.745 0.889 - - - - - - 0.726 NOTCH regulated ankyrin repeat protein a [Source:ZFIN;Acc:ZDB-GENE-030515-6]
22. stmn1a ENSDARG00000004169 21169 2.341 0.792 - 0.783 - - - - - 0.766 stathmin 1a [Source:ZFIN;Acc:ZDB-GENE-031006-14]
23. hdac1 ENSDARG00000015427 19804 2.338 0.709 - 0.830 - - - - - 0.799 histone deacetylase 1 [Source:ZFIN;Acc:ZDB-GENE-020419-32]
24. whsc1 1701 2.333 - - 0.750 - 0.826 - - - 0.757 Wolf-Hirschhorn syndrome candidate 1
25. rbpjb ENSDARG00000052091 3122 2.33 - - 0.761 0.802 - - - - 0.767 recombination signal binding protein for immunoglobulin kappa J region b [Source:ZFIN;Acc:ZDB-GENE-070319-1]
26. jarid2b ENSDARG00000062268 2206 2.326 - 0.875 0.732 - - - - - 0.719 jumonji, AT rich interactive domain 2b [Source:ZFIN;Acc:ZDB-GENE-060503-246]
27. mbd3b ENSDARG00000042029, ENSDARG00000061810 4561 2.311 0.753 - - - 0.785 - - - 0.773 methyl-CpG binding domain protein 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9792]
28. FNBP4 ENSDARG00000051800 2839 2.308 - - 0.761 - 0.793 - - - 0.754 formin binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-130530-633]
29. hnrnpa0l ENSDARG00000036161, ENSDARG00000076380, ENSDARG00000114889 72444 2.302 0.811 - 0.774 - - - - - 0.717 heterogeneous nuclear ribonucleoprotein A0, like [Source:ZFIN;Acc:ZDB-GENE-030131-618]
30. hmp19 2554 2.293 0.712 - - 0.803 - - - - 0.778 HMP19 protein
31. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 2.292 0.711 - 0.763 - - - - - 0.818 cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
32. sin3b ENSDARG00000062472 2025 2.287 - - 0.757 - - - - 0.735 0.795 SIN3 transcription regulator family member B [Source:ZFIN;Acc:ZDB-GENE-030131-8264]
33. zc4h2 ENSDARG00000015314, ENSDARG00000112180 5141 2.286 - - 0.768 - 0.743 - - 0.775 - zinc finger, C4H2 domain containing [Source:ZFIN;Acc:ZDB-GENE-030131-2207]
34. arnt2 ENSDARG00000103697 5731 2.283 - - 0.714 0.798 - - - - 0.771 aryl-hydrocarbon receptor nuclear translocator 2 [Source:ZFIN;Acc:ZDB-GENE-001207-3]
35. vezf1a ENSDARG00000008247 1449 2.278 - - 0.705 - 0.793 - - - 0.780 vascular endothelial zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-040108-4]
36. arhgef2 ENSDARG00000075819 2173 2.277 - - 0.731 - - - - 0.790 0.756 rho/rac guanine nucleotide exchange factor (GEF) 2 [Source:ZFIN;Acc:ZDB-GENE-030717-1]
37. ldb1a ENSDARG00000010137 3035 2.273 - - - - 0.708 - - 0.727 0.838 LIM domain binding 1a [Source:ZFIN;Acc:ZDB-GENE-990415-138]
38. usp7 ENSDARG00000073710 7017 2.265 0.720 - 0.762 - - - - - 0.783 ubiquitin specific peptidase 7 (herpes virus-associated) [Source:ZFIN;Acc:ZDB-GENE-030131-3656]
39. clvs2 ENSDARG00000053122 1390 2.26 0.779 - - - - - - 0.725 0.756 clavesin 2 [Source:ZFIN;Acc:ZDB-GENE-041014-313]
40. AGO1 ENSDARG00000092644 4521 2.26 0.750 - 0.772 - - - - - 0.738 argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]
41. sox3 ENSDARG00000053569 12016 2.241 0.701 - 0.768 0.772 - - - - - SRY (sex determining region Y)-box 3 [Source:ZFIN;Acc:ZDB-GENE-980526-333]
42. ublcp1 ENSDARG00000044492, ENSDARG00000111451 888 2.234 - - 0.792 - 0.722 - - - 0.720 ubiquitin-like domain containing CTD phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-040718-3]
43. nup205 ENSDARG00000042530, ENSDARG00000114489 2255 2.229 - - 0.704 - 0.752 - - - 0.773 nucleoporin 205 [Source:ZFIN;Acc:ZDB-GENE-040715-8]
44. khsrp ENSDARG00000026489 15738 2.202 0.752 - 0.705 - - - - - 0.745 KH-type splicing regulatory protein [Source:ZFIN;Acc:ZDB-GENE-030131-4357]
45. nin ENSDARG00000060298 1558 2.184 0.712 - - - 0.737 - - - 0.735 ninein (GSK3B interacting protein) [Source:ZFIN;Acc:ZDB-GENE-070725-1]
46. gpm6aa ENSDARG00000055455, ENSDARG00000110942 9156 2.178 0.735 - - - 0.700 - - - 0.743 glycoprotein M6Aa [Source:ZFIN;Acc:ZDB-GENE-030710-7]
47. xrcc1 ENSDARG00000009494 1346 2.171 0.704 - - - 0.719 - - - 0.748 X-ray repair complementing defective repair in Chinese hamster cells 1 [Source:ZFIN;Acc:ZDB-GENE-040822-30]
48. rab1ba ENSDARG00000058044 5080 1.985 - - - - - 0.987 0.998 - - zRAB1B, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-040426-873]
49. mcts1 ENSDARG00000025972 4662 1.871 - 0.875 - - - 0.996 - - - malignant T cell amplified sequence 1 [Source:ZFIN;Acc:ZDB-GENE-040426-957]
50. flot2b ENSDARG00000069774 2831 1.864 - 0.868 - - - 0.996 - - - flotillin 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1368]
51. nfe2l2a ENSDARG00000042824 1707 1.859 - 0.870 - - - 0.989 - - - nuclear factor, erythroid 2-like 2a [Source:ZFIN;Acc:ZDB-GENE-030723-2]
52. ndufv2 ENSDARG00000013044 3758 1.839 - 0.844 - - - 0.995 - - - NADH:ubiquinone oxidoreductase core subunit V2 [Source:ZFIN;Acc:ZDB-GENE-040426-1713]
53. nr2f1a ENSDARG00000052695 5037 1.836 - - - - - - 0.994 - 0.842 nuclear receptor subfamily 2, group F, member 1a [Source:ZFIN;Acc:ZDB-GENE-980526-115]
54. hoxb8a ENSDARG00000056027 6340 1.831 0.832 - - - - - 0.999 - - homeobox B8a [Source:ZFIN;Acc:ZDB-GENE-990415-108]
55. fam32al fam32al 5716 1.829 - - - - - 0.994 - 0.835 -
56. abat ENSDARG00000006031 2143 1.82 - 0.829 - - - 0.991 - - - 4-aminobutyrate aminotransferase [Source:ZFIN;Acc:ZDB-GENE-031006-4]
57. jak1 ENSDARG00000020625, ENSDARG00000117102 5057 1.81 - 0.854 - - - 0.956 - - - Janus kinase 1 [Source:ZFIN;Acc:ZDB-GENE-980526-142]
58. khdrbs1a ENSDARG00000052856 53666 1.78 0.811 - - - - - 0.969 - - KH domain containing, RNA binding, signal transduction associated 1a [Source:ZFIN;Acc:ZDB-GENE-000210-25]
59. si:dkey-11e23.5 si:dkey-11e23.5 3464 1.776 0.787 - - - - 0.989 - - -
60. mat2aa ENSDARG00000040334 10769 1.775 - - - 0.780 - - 0.995 - - methionine adenosyltransferase II, alpha a [Source:ZFIN;Acc:ZDB-GENE-030131-2049]
61. PSIP1 PSIP1 5252 1.765 0.769 - - - - 0.996 - - -
62. wu:fc51f04 wu:fc51f04 7074 1.759 - - - - - 0.980 - - 0.779
63. mxd3 ENSDARG00000098350 3040 1.759 - 0.935 - - - - - - 0.824 MAX dimerization protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1588]
64. sf3b4 ENSDARG00000018574 7470 1.755 - - 0.760 - - 0.995 - - - splicing factor 3b, subunit 4 [Source:ZFIN;Acc:ZDB-GENE-020419-22]
65. parn ENSDARG00000102634 2049 1.75 - - - - - 0.996 - - 0.754 poly(A)-specific ribonuclease (deadenylation nuclease) [Source:ZFIN;Acc:ZDB-GENE-040426-880]
66. suclg1 ENSDARG00000052712 17570 1.747 - - - 0.761 - - 0.986 - - succinate-CoA ligase, alpha subunit [Source:ZFIN;Acc:ZDB-GENE-040912-101]
67. nusap1 ENSDARG00000002403 6953 1.746 - 0.917 - - 0.829 - - - - nucleolar and spindle associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030827-5]
68. pcdh19 ENSDARG00000034344 2378 1.744 - - - - 0.863 - - - 0.881 protocadherin 19 [Source:ZFIN;Acc:ZDB-GENE-030131-4218]
69. PROSER1 ENSDARG00000086302 1935 1.742 - - 0.745 - - 0.997 - - - proline and serine rich 1 [Source:ZFIN;Acc:ZDB-GENE-111003-1]
70. ezh2 ENSDARG00000010571 3273 1.74 - - 0.864 - - - - - 0.876 enhancer of zeste 2 polycomb repressive complex 2 subunit [Source:ZFIN;Acc:ZDB-GENE-041111-259]
71. pds5a ENSDARG00000055022, ENSDARG00000115793 3842 1.734 - - 0.869 - 0.865 - - - - PDS5 cohesin associated factor A [Source:ZFIN;Acc:ZDB-GENE-040426-1612]
72. dnajb12b ENSDARG00000087473 3811 1.723 - - - - - 0.990 - - 0.733 DnaJ (Hsp40) homolog, subfamily B, member 12b [Source:ZFIN;Acc:ZDB-GENE-070410-128]
73. rbb4 rbb4 15541 1.716 - - 0.903 - - - - - 0.813
74. SV2A ENSDARG00000059945 1278 1.715 0.728 - - - - 0.987 - - - synaptic vesicle glycoprotein 2A [Source:ZFIN;Acc:ZDB-GENE-131001-1]
75. nup62l ENSDARG00000020527, ENSDARG00000111836, ENSDARG00000112620 3763 1.71 - 0.940 0.770 - - - - - - nucleoporin 62 like [Source:ZFIN;Acc:ZDB-GENE-030131-8491]
76. npm1a ENSDARG00000014329, ENSDARG00000113199 31910 1.704 - - - 0.936 - - - - 0.768 nucleophosmin 1a [Source:ZFIN;Acc:ZDB-GENE-021028-1]
77. znf292a ENSDARG00000016763 2253 1.693 - 0.867 - - - - - - 0.826 zinc finger protein 292a [Source:ZFIN;Acc:ZDB-GENE-071004-18]
78. fmnl2b ENSDARG00000075041 1744 1.691 - 0.882 - - - - - - 0.809 formin-like 2b [Source:ZFIN;Acc:ZDB-GENE-041111-182]
79. hnrnpub ENSDARG00000004735 16496 1.69 0.815 - - - - - - - 0.875 heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
80. arpp19b ENSDARG00000039880 4823 1.689 - 0.893 - - - - - - 0.796 cAMP-regulated phosphoprotein 19b [Source:ZFIN;Acc:ZDB-GENE-040426-930]
81. peli1b ENSDARG00000044083, ENSDARG00000112797 3801 1.686 - 0.883 - - - - - - 0.803 pellino E3 ubiquitin protein ligase 1b [Source:ZFIN;Acc:ZDB-GENE-061027-372]
82. hmgb1b ENSDARG00000030479 10398 1.683 0.831 - 0.852 - - - - - - high mobility group box 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8480]
83. ctbp1 ENSDARG00000057007, ENSDARG00000115804 5795 1.681 - 0.868 0.813 - - - - - - C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]
84. smc1al ENSDARG00000058203 8838 1.673 - - 0.845 - - - - - 0.828 structural maintenance of chromosomes 1A, like [Source:ZFIN;Acc:ZDB-GENE-040426-57]
85. IWS1 2428 1.671 - 0.866 - - - - - - 0.805 IWS1, SUPT6H interacting protein, transcript variant X2
86. her2 ENSDARG00000038205 3219 1.664 0.777 0.887 - - - - - - - hairy-related 2 [Source:ZFIN;Acc:ZDB-GENE-980526-274]
87. srsf7a ENSDARG00000035325, ENSDARG00000110705 11788 1.658 - - 0.813 - - - - - 0.845 serine/arginine-rich splicing factor 7a [Source:ZFIN;Acc:ZDB-GENE-040426-1798]
88. CR936437.1 CR936437.1 6465 1.657 - - 0.852 - - - - - 0.805
89. znf346 ENSDARG00000060695 3942 1.654 - 0.922 - - - - - - 0.732 zinc finger protein 346 [Source:ZFIN;Acc:ZDB-GENE-070209-152]
90. abi1a ENSDARG00000010155 5631 1.65 - 0.752 - - - 0.898 - - - abl-interactor 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1701]
91. nhp2 ENSDARG00000069422 9925 1.646 - 0.937 - - - - - 0.709 - NHP2 ribonucleoprotein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-533]
92. marcksa ENSDARG00000004049 2518 1.644 - - - - - - - 0.768 0.876 myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
93. lrp5 ENSDARG00000006921 3522 1.644 - 0.843 - 0.801 - - - - - low density lipoprotein receptor-related protein 5 [Source:ZFIN;Acc:ZDB-GENE-050518-2]
94. mex3b ENSDARG00000058369 1867 1.642 - - 0.768 - 0.874 - - - - mex-3 RNA binding family member B [Source:ZFIN;Acc:ZDB-GENE-030131-2628]
95. srsf3a ENSDARG00000025397, ENSDARG00000100815 11622 1.634 - 0.901 0.733 - - - - - - serine/arginine-rich splicing factor 3a [Source:ZFIN;Acc:ZDB-GENE-030616-631]
96. ranbp1 ENSDARG00000014817 3371 1.632 - 0.882 0.750 - - - - - - RAN binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2548]
97. kif22 ENSDARG00000102624 3694 1.63 - - 0.804 - - - - - 0.826 kinesin family member 22 [Source:ZFIN;Acc:ZDB-GENE-080204-34]
98. SENP1 SENP1 1122 1.63 - 0.881 - - - - - - 0.749
99. si:dkeyp-44a8.2 ENSDARG00000092493 8308 1.621 - - - 0.793 - - - - 0.828 si:dkeyp-44a8.2 [Source:ZFIN;Acc:ZDB-GENE-070705-542]
100. marcksl1b ENSDARG00000035715 37390 1.62 0.840 - - - - - - - 0.780 MARCKS-like 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2315]

There are 1580 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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