Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for pan3

Gene Name Gene ID Reads Annotation
pan3 ENSDARG00000031637, ENSDARG00000111004 613 poly(A) specific ribonuclease subunit PAN3 [Source:ZFIN;Acc:ZDB-GENE-070928-13]










Genes with expression patterns similar to pan3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pan3 ENSDARG00000031637, ENSDARG00000111004 613 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 poly(A) specific ribonuclease subunit PAN3 [Source:ZFIN;Acc:ZDB-GENE-070928-13]
2. smurf1 ENSDARG00000016086 878 1.983 - - - - 0.990 - 0.993 - - SMAD specific E3 ubiquitin protein ligase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2744]
3. atl3 ENSDARG00000004270 2806 1.93 - - - - 0.974 - 0.956 - - atlastin 3 [Source:ZFIN;Acc:ZDB-GENE-041010-109]
4. SLITRK6 ENSDARG00000098769 217 1.915 - 0.916 - - - - 0.999 - - SLIT and NTRK-like family, member 6 [Source:ZFIN;Acc:ZDB-GENE-030131-2816]
5. illr4 ENSDARG00000008075 164 1.907 - 0.909 - - - - 0.998 - - immune-related, lectin-like receptor 4 [Source:ZFIN;Acc:ZDB-GENE-050311-5]
6. dusp2 ENSDARG00000098108 353 1.881 - 0.900 - - - - 0.981 - - dual specificity phosphatase 2 [Source:ZFIN;Acc:ZDB-GENE-040801-188]
7. edc4 ENSDARG00000062266, ENSDARG00000114070 2505 1.825 - - - - 0.962 0.863 - - - enhancer of mRNA decapping 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5032]
8. si:dkeyp-120h9.1 ENSDARG00000020278 3120 1.808 - - - - 0.921 - 0.887 - - si:dkeyp-120h9.1 [Source:ZFIN;Acc:ZDB-GENE-070705-534]
9. armc1l ENSDARG00000020887 1219 1.808 - 0.812 - - - - 0.996 - - armadillo repeat containing 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-9819]
10. actr10 ENSDARG00000038432 1598 1.807 - - - - - 0.823 0.984 - - ARP10 actin related protein 10 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-768]
11. rab5b ENSDARG00000016059, ENSDARG00000114966 1252 1.804 - - - - 0.985 0.819 - - - RAB5B, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040426-2593]
12. ubap2l ENSDARG00000063219 1147 1.797 - 0.821 - - - - 0.976 - - ubiquitin associated protein 2-like [Source:ZFIN;Acc:ZDB-GENE-060503-244]
13. CR759921.2 CR759921.2 583 1.787 - - - - 0.989 0.798 - - -
14. hvcn1 ENSDARG00000040338 571 1.782 - 0.796 - - 0.986 - - - - hydrogen voltage-gated channel 1 [Source:ZFIN;Acc:ZDB-GENE-040718-36]
15. lnx1 ENSDARG00000043323, ENSDARG00000113875 1199 1.781 - 0.811 - - - - 0.970 - - ligand of numb-protein X 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9439]
16. EXO5 ENSDARG00000042727, ENSDARG00000111772 282 1.777 - - - - - 0.778 0.999 - - exonuclease 5 [Source:ZFIN;Acc:ZDB-GENE-051113-108]
17. zgc:66014 817 1.773 - 0.778 - - - - 0.995 - - zgc:66014, transcript variant X6
18. cenpi ENSDARG00000052565 482 1.766 - 0.775 - - 0.991 - - - - centromere protein I [Source:ZFIN;Acc:ZDB-GENE-060810-127]
19. igf2bp3 ENSDARG00000010266 5789 1.763 - - - - 0.899 - 0.864 - - insulin-like growth factor 2 mRNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-000308-1]
20. ago4 ENSDARG00000100854 496 1.762 - 0.770 - - 0.992 - - - - argonaute RISC catalytic component 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5357]
21. dhodh ENSDARG00000051889 401 1.76 - 0.762 - - - - 0.998 - - dihydroorotate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030131-3157]
22. calm3a ENSDARG00000015050, ENSDARG00000100825 1817 1.759 - 0.781 - - 0.978 - - - - calmodulin 3a (phosphorylase kinase, delta) [Source:ZFIN;Acc:ZDB-GENE-030131-5590]
23. PSD PSD 367 1.755 - - - - - 0.756 0.999 - -
24. msxe msxe 362 1.753 - - - - 0.990 0.763 - - -
25. snx7 ENSDARG00000105185 2977 1.752 - - - - - 0.764 0.988 - - sorting nexin 7 [Source:ZFIN;Acc:ZDB-GENE-040704-77]
26. aatf ENSDARG00000025467, ENSDARG00000109548 796 1.744 - - - - 0.991 0.753 - - - apoptosis antagonizing transcription factor [Source:ZFIN;Acc:ZDB-GENE-030131-9654]
27. UNKL ENSDARG00000037838 1086 1.74 - - - - 0.958 0.782 - - - unkempt family zinc finger-like [Source:ZFIN;Acc:ZDB-GENE-131120-196]
28. NBEAL1 ENSDARG00000099547 1112 1.74 - 0.756 - - - - 0.984 - - neurobeachin-like 1 [Source:ZFIN;Acc:ZDB-GENE-130530-544]
29. rpz5 ENSDARG00000075718 1703 1.725 - 0.794 - - - - 0.931 - - rapunzel 5 [Source:ZFIN;Acc:ZDB-GENE-030131-4678]
30. phf21ab ENSDARG00000021378 1706 1.719 - - - - 0.728 - 0.991 - - PHD finger protein 21Ab [Source:ZFIN;Acc:ZDB-GENE-030131-6456]
31. kansl3 ENSDARG00000029556 2487 1.717 - - - - - 0.731 0.986 - - KAT8 regulatory NSL complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-050809-132]
32. ifrd1 ENSDARG00000068708 2858 1.706 - 0.771 - - - - 0.935 - - interferon-related developmental regulator 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6132]
33. MANBAL ENSDARG00000059853 636 1.705 - - - - 0.987 0.718 - - - mannosidase beta like [Source:ZFIN;Acc:ZDB-GENE-161222-1]
34. abcb7 ENSDARG00000062795 1404 1.7 - - - - - 0.740 0.960 - - ATP-binding cassette, sub-family B (MDR/TAP), member 7 [Source:ZFIN;Acc:ZDB-GENE-050517-10]
35. kdm5ba ENSDARG00000057093, ENSDARG00000111539 3302 1.699 - - - - - 0.706 0.993 - - lysine (K)-specific demethylase 5Ba [Source:ZFIN;Acc:ZDB-GENE-030131-5379]
36. srpk1b ENSDARG00000031560 2079 1.697 - - - - 0.948 0.749 - - - SRSF protein kinase 1b [Source:ZFIN;Acc:ZDB-GENE-070112-2292]
37. TMEM246 ENSDARG00000061553 168 1.693 - 0.939 - - - 0.754 - - - transmembrane protein 246 [Source:ZFIN;Acc:ZDB-GENE-061013-692]
38. b3gnt3.3 ENSDARG00000093521 430 1.687 - 0.772 - - - - 0.915 - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-081105-12]
39. mapta ENSDARG00000089314 2038 1.682 - - - - - 0.714 0.968 - - microtubule-associated protein tau a [Source:ZFIN;Acc:ZDB-GENE-081027-1]
40. wu:fc51f04 wu:fc51f04 7074 1.669 - - - - 0.870 - 0.799 - -
41. dcakd ENSDARG00000061638 120 1.667 - 0.927 - - - 0.740 - - - dephospho-CoA kinase domain containing [Source:ZFIN;Acc:ZDB-GENE-060825-226]
42. LYRM9 ENSDARG00000075528 329 1.658 0.736 0.922 - - - - - - - LYR motif containing 9 [Source:ZFIN;Acc:ZDB-GENE-081022-28]
43. ARHGAP23 ARHGAP23 3946 1.603 - - - - - 0.709 0.894 - -
44. BX511021.3 ENSDARG00000117414 592 1.581 - 0.853 - - - 0.728 - - -
45. slc16a8 ENSDARG00000045153 478 1.574 - 0.844 - - - - - 0.730 - solute carrier family 16 (monocarboxylate transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-121128-1]
46. rassf10a 417 1.552 - 0.788 - - - 0.764 - - - Ras association (RalGDS/AF-6) domain family (N-terminal) member 10a
47. b2m ENSDARG00000053136 215 1.549 - 0.782 - - - 0.767 - - - beta-2-microglobulin [Source:ZFIN;Acc:ZDB-GENE-980526-88]
48. USP31 ENSDARG00000074017 628 1.549 - 0.789 - - - 0.760 - - - ubiquitin specific peptidase 31 [Source:ZFIN;Acc:ZDB-GENE-100210-4]
49. itfg2 ENSDARG00000002174 114 1.546 - - - 0.768 - 0.778 - - - integrin alpha FG-GAP repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-041008-161]
50. ZNF337_18 ZNF337_18 152 1.532 - 0.826 - - - 0.706 - - -
51. tmem35 ENSDARG00000052567 5685 1.506 - 0.782 - - 0.724 - - - - transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
52. rab11ba ENSDARG00000041878 4651 1.494 - - - - - - 0.791 0.703 - RAB11B, member RAS oncogene family, a [Source:ZFIN;Acc:ZDB-GENE-040426-2860]
53. mnd1 ENSDARG00000074451 182 1.494 - 0.771 - - - 0.723 - - - meiotic nuclear divisions 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040801-116]
54. smcr8a ENSDARG00000052818 559 1.488 - 0.726 - - - 0.762 - - - Smith-Magenis syndrome chromosome region, candidate 8a [Source:ZFIN;Acc:ZDB-GENE-071212-4]
55. acsl3a ENSDARG00000032079 897 1.482 - 0.726 - - - - 0.756 - - acyl-CoA synthetase long chain family member 3a [Source:ZFIN;Acc:ZDB-GENE-050420-181]
56. LRRC8A LRRC8A 406 1.457 - 0.700 - - - 0.757 - - -
57. zfpm1 ENSDARG00000041572, ENSDARG00000109585 331 1.454 - 0.740 - - - 0.714 - - - zinc finger protein, FOG family member 1 [Source:ZFIN;Acc:ZDB-GENE-050419-238]
58. tubgcp2 ENSDARG00000013079 1520 1.45 - 0.724 - - 0.726 - - - - tubulin, gamma complex associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-031118-150]
59. asb6 ENSDARG00000007125 389 1 - - - - - - 1.000 - - ankyrin repeat and SOCS box containing 6 [Source:ZFIN;Acc:ZDB-GENE-050522-338]
60. tbccd1 ENSDARG00000056886, ENSDARG00000114427 1389 0.999 - - - - - - 0.999 - - TBCC domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041210-222]
61. ICT1 356 0.999 - - - - - - 0.999 - - immature colon carcinoma transcript 1
62. baz2a ENSDARG00000102974 266 0.999 - - - - - - 0.999 - - bromodomain adjacent to zinc finger domain, 2A [Source:ZFIN;Acc:ZDB-GENE-041010-202]
63. usp43a ENSDARG00000103494, ENSDARG00000111546, ENSDARG00000112146 211 0.999 - - - - - - 0.999 - - ubiquitin specific peptidase 43a [Source:ZFIN;Acc:ZDB-GENE-100211-1]
64. socs3a ENSDARG00000025428 349 0.999 - - - - - - 0.999 - - suppressor of cytokine signaling 3a [Source:ZFIN;Acc:ZDB-GENE-030131-7349]
65. zgc:171759_5 ENSDARG00000100259, ENSDARG00000109737, ENSDARG00000111964, ENSDARG00000114195, ENSDARG00000115938 274 0.999 - - - - - - 0.999 - - zgc:171759 [Source:ZFIN;Acc:ZDB-GENE-071004-32]
66. bin2b ENSDARG00000010255 2649 0.999 - - - - - - 0.999 - - bridging integrator 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5598]
67. asb3 ENSDARG00000005246 317 0.999 - - - - - - 0.999 - - ankyrin repeat and SOCS box containing 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6142]
68. PLXNB2 PLXNB2 99 0.999 - - - - - - 0.999 - -
69. VPS37C ENSDARG00000031836 906 0.999 - - - - - - 0.999 - - vacuolar protein sorting 37 homolog C (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-061110-126]
70. lppr4a lppr4a 141 0.999 - - - - - - 0.999 - -
71. BX324179.3 BX324179.3 326 0.999 - - - - - - 0.999 - -
72. ctdnep1a ENSDARG00000016519, ENSDARG00000115280 596 0.999 - - - - - - 0.999 - - CTD nuclear envelope phosphatase 1a [Source:ZFIN;Acc:ZDB-GENE-041114-177]
73. znf687a ENSDARG00000102774 393 0.999 - - - - - - 0.999 - - zinc finger protein 687a [Source:ZFIN;Acc:ZDB-GENE-100922-32]
74. si:ch211-51o18.2 si:ch211-51o18.2 111 0.999 - - - - - - 0.999 - -
75. ZNF337_10 ZNF337_10 183 0.999 - - - - - - 0.999 - -
76. OCRL ENSDARG00000078106, ENSDARG00000115715, ENSDARG00000117019 317 0.999 - - - - - - 0.999 - - oculocerebrorenal syndrome of Lowe [Source:ZFIN;Acc:ZDB-GENE-061110-61]
77. PRR5 PRR5 630 0.999 - - - - - - 0.999 - -
78. zgc:173962 zgc:173962 67 0.999 - - - - - - 0.999 - -
79. plxna4 ENSDARG00000019328 782 0.999 - - - - - - 0.999 - - plexin A4 [Source:ZFIN;Acc:ZDB-GENE-030131-4663]
80. sult3st1 ENSDARG00000009885 218 0.999 - - - - - - 0.999 - - sulfotransferase family 3, cytosolic sulfotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-061207-52]
81. dnajb9a ENSDARG00000052072 578 0.998 - - - - - - 0.998 - - DnaJ (Hsp40) homolog, subfamily B, member 9a [Source:ZFIN;Acc:ZDB-GENE-050626-115]
82. FBXO31 ENSDARG00000062195 753 0.998 - - - - - - 0.998 - - F-box protein 31 [Source:ZFIN;Acc:ZDB-GENE-070628-4]
83. si:ch73-108h4.3 si:ch73-108h4.3 193 0.998 - - - - - - 0.998 - -
84. zgc:63691 zgc:63691 180 0.998 - - - - - - 0.998 - -
85. AMDHD1 ENSDARG00000007366 89 0.998 - - - - - - 0.998 - - amidohydrolase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:28577]
86. cul1b ENSDARG00000007691 719 0.998 - - - - - - 0.998 - - cullin 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2887]
87. zdhhc3 zdhhc3 152 0.998 - - - - - - 0.998 - -
88. PDZD8 ENSDARG00000088699 844 0.998 - - - - - - 0.998 - - PDZ domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-110310-2]
89. ERRFI1 ERRFI1 664 0.998 - - - - - - 0.998 - -
90. igfbp3 ENSDARG00000099144 269 0.998 - - - - - - 0.998 - - insulin-like growth factor binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-040412-1]
91. unk ENSDARG00000000935 353 0.998 - - - - - - 0.998 - - unkempt family zinc finger [Source:ZFIN;Acc:ZDB-GENE-040426-707]
92. plekhh1 ENSDARG00000053835 2123 0.997 - - - - - - 0.997 - - pleckstrin homology domain containing, family H (with MyTH4 domain) member 1 [Source:ZFIN;Acc:ZDB-GENE-061219-1]
93. zgc:136763 zgc:136763 190 0.997 - - - - - - 0.997 - -
94. prdm5 ENSDARG00000006288 472 0.997 - - - - - - 0.997 - - PR domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-040708-1]
95. kbtbd7 ENSDARG00000078001 367 0.997 - - - - - - 0.997 - - kelch repeat and BTB (POZ) domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-070912-204]
96. mob2b ENSDARG00000012005 395 0.997 - - - - - - 0.997 - - MOB kinase activator 2b [Source:ZFIN;Acc:ZDB-GENE-060616-319]
97. CABZ01068263.1 CABZ01068263.1 712 0.997 - - - - - - 0.997 - -
98. CAPN5 CAPN5 357 0.997 - - - - - - 0.997 - -
99. zgc:153372 ENSDARG00000068967 358 0.997 - - - - - - 0.997 - - zgc:153372 [Source:ZFIN;Acc:ZDB-GENE-060929-680]
100. mrps7 ENSDARG00000101622 889 0.997 - - - - - - 0.997 - - mitochondrial ribosomal protein S7 [Source:ZFIN;Acc:ZDB-GENE-050809-112]

There are 1834 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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