Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for palm1b

Gene Name Gene ID Reads Annotation
palm1b ENSDARG00000007818 2128 paralemmin 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1147]










Genes with expression patterns similar to palm1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. palm1b ENSDARG00000007818 2128 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 paralemmin 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1147]
2. pum1 ENSDARG00000099256 5017 3.09 - 0.728 - - - 0.716 0.786 0.860 - pumilio RNA-binding family member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2074]
3. her15.2 her15.2 1701 2.585 - - - - - 0.920 - 0.913 0.752
4. araf ENSDARG00000054533 1132 2.479 - 0.840 - - - - 0.790 - 0.849 A-Raf proto-oncogene, serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-050102-2]
5. phf10 ENSDARG00000070084 1210 2.471 - - - - - 0.832 - 0.793 0.846 PHD finger protein 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1573]
6. abi2b ENSDARG00000014875 2259 2.441 - - - - - 0.832 0.837 - 0.772 abl-interactor 2b [Source:ZFIN;Acc:ZDB-GENE-060519-5]
7. ap2b1 ENSDARG00000035152 2912 2.375 - - - - - 0.809 0.713 0.853 - adaptor related protein complex 2 subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6564]
8. dynll2b ENSDARG00000005172 935 2.358 - 0.752 - - - 0.862 0.744 - - dynein, light chain, LC8-type 2b [Source:ZFIN;Acc:ZDB-GENE-050320-132]
9. FBXL3 FBXL3 1769 2.339 - 0.737 - - - - 0.749 - 0.853
10. elmod2 ENSDARG00000101669 3101 2.278 - 0.771 - - - 0.751 - 0.756 - ELMO/CED-12 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060824-2]
11. tra2a ENSDARG00000007863 4449 2.269 - - - - - 0.728 0.706 - 0.835 transformer 2 alpha homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1391]
12. TNRC6B ENSDARG00000074161 2464 2.213 - - - - - 0.741 0.747 - 0.725 trinucleotide repeat containing 6b [Source:ZFIN;Acc:ZDB-GENE-030131-13]
13. khsrp ENSDARG00000026489 15738 2.141 - - - - - 0.731 0.704 0.706 - KH-type splicing regulatory protein [Source:ZFIN;Acc:ZDB-GENE-030131-4357]
14. spred1 ENSDARG00000041449, ENSDARG00000117025 1124 1.834 - - - - - 0.912 - 0.922 - sprouty-related, EVH1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2338]
15. sf1 ENSDARG00000008188 5142 1.8 - - - - - 0.888 - 0.912 - splicing factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2492]
16. phc2b_1 ENSDARG00000013224 1316 1.777 - - - - - 0.940 - - 0.837 polyhomeotic homolog 2b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-1113]
17. daxx ENSDARG00000000729 734 1.758 - - - - - 0.938 - - 0.820 death-domain associated protein [Source:ZFIN;Acc:ZDB-GENE-010110-3]
18. st8sia5 ENSDARG00000036584 529 1.754 - - - - - 0.920 - - 0.834 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 [Source:ZFIN;Acc:ZDB-GENE-060322-8]
19. gna11b ENSDARG00000053326 5118 1.744 - 0.895 - - - - 0.849 - - guanine nucleotide binding protein (G protein), alpha 11b (Gq class) [Source:ZFIN;Acc:ZDB-GENE-041121-9]
20. cenpk ENSDARG00000039616 744 1.743 - - - - - 0.933 - - 0.810 centromere protein K [Source:ZFIN;Acc:ZDB-GENE-090313-204]
21. ptpro ENSDARG00000100422, ENSDARG00000110470 1850 1.742 - - - - - 0.905 - - 0.837 protein tyrosine phosphatase, receptor type, O [Source:ZFIN;Acc:ZDB-GENE-070424-54]
22. thsd7ba ENSDARG00000095022 231 1.737 - - - - - 0.925 - - 0.812 thrombospondin, type I, domain containing 7Ba [Source:ZFIN;Acc:ZDB-GENE-070621-2]
23. MAN2A2 ENSDARG00000063101 922 1.733 - - - - - 0.917 - - 0.816 mannosidase, alpha, class 2A, member 2 [Source:ZFIN;Acc:ZDB-GENE-110331-1]
24. caly ENSDARG00000036008 1002 1.728 - - - - - 0.898 - - 0.830 calcyon neuron-specific vesicular protein [Source:ZFIN;Acc:ZDB-GENE-090313-405]
25. nadl1.2 695 1.724 - - - - - 0.879 - - 0.845 neural adhesion molecule L1.2, transcript variant X1
26. CYTH2 ENSDARG00000028800 2349 1.721 - - - - - 0.864 - 0.857 - cytohesin 2 [Source:HGNC Symbol;Acc:HGNC:9502]
27. htr3a ENSDARG00000089212 51 1.719 0.768 - - - - 0.951 - - - 5-hydroxytryptamine (serotonin) receptor 3A [Source:ZFIN;Acc:ZDB-GENE-071012-5]
28. atcaya ENSDARG00000071678 344 1.717 - - - - - 0.925 - 0.792 - ataxia, cerebellar, Cayman type a [Source:ZFIN;Acc:ZDB-GENE-070705-185]
29. ddx23 ENSDARG00000021945, ENSDARG00000116153 2265 1.715 - - - - - - - 0.921 0.794 DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Source:ZFIN;Acc:ZDB-GENE-030131-6215]
30. memo1 ENSDARG00000010823 1681 1.711 - - - - - 0.900 - - 0.811 mediator of cell motility 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5571]
31. mex3b ENSDARG00000058369 1867 1.709 - - - - - 0.880 - - 0.829 mex-3 RNA binding family member B [Source:ZFIN;Acc:ZDB-GENE-030131-2628]
32. si:ch211-133l11.10 ENSDARG00000005626 381 1.707 - - - - - 0.900 - - 0.807 si:ch211-133l11.10 [Source:ZFIN;Acc:ZDB-GENE-141219-14]
33. kif5aa ENSDARG00000098936 2428 1.706 - - - - - 0.792 - 0.914 - kinesin family member 5A, a [Source:ZFIN;Acc:ZDB-GENE-070912-141]
34. dpf2l ENSDARG00000037291, ENSDARG00000112198 2353 1.706 - - - - - 0.920 - 0.786 - D4, zinc and double PHD fingers family 2, like [Source:ZFIN;Acc:ZDB-GENE-030131-5132]
35. plat ENSDARG00000062707 491 1.702 - - - - - 0.924 - 0.778 - plasminogen activator, tissue [Source:ZFIN;Acc:ZDB-GENE-081104-181]
36. nexmifb ENSDARG00000029296 416 1.695 - - - - - 0.914 - 0.781 - neurite extension and migration factor b [Source:ZFIN;Acc:ZDB-GENE-140106-18]
37. pspc1 ENSDARG00000006621 966 1.693 - - - - - 0.868 - - 0.825 paraspeckle component 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9530]
38. tox4 tox4 1671 1.692 - - - - - 0.898 - - 0.794
39. zgc:158291 ENSDARG00000044375, ENSDARG00000111929 621 1.685 0.740 - - - - 0.945 - - - zgc:158291 [Source:ZFIN;Acc:ZDB-GENE-061215-70]
40. si:ch211-213a13.1 ENSDARG00000090600 381 1.681 - - - - - 0.954 0.727 - - si:ch211-213a13.1 [Source:ZFIN;Acc:ZDB-GENE-050208-471]
41. PROSER1 ENSDARG00000086302 1935 1.679 - - - - - - - 0.914 0.765 proline and serine rich 1 [Source:ZFIN;Acc:ZDB-GENE-111003-1]
42. atpv0e2 ENSDARG00000059057 585 1.679 0.726 - - - - 0.953 - - - ATPase H+ transporting V0 subunit e2 [Source:ZFIN;Acc:ZDB-GENE-050522-135]
43. ek1 ENSDARG00000020080 742 1.675 - - - - - 0.881 - 0.794 - eph-like kinase 1 [Source:ZFIN;Acc:ZDB-GENE-990415-58]
44. tet3 ENSDARG00000062646 6672 1.675 - - - - - - 0.797 0.878 - tet methylcytosine dioxygenase 3 [Source:ZFIN;Acc:ZDB-GENE-060526-109]
45. gabpb2a ENSDARG00000007943 1570 1.672 - - - - - 0.938 0.734 - - GA binding protein transcription factor subunit beta 2a [Source:ZFIN;Acc:ZDB-GENE-030131-5733]
46. stmn2a ENSDARG00000033234 2272 1.668 - - - - - 0.856 - - 0.812 stathmin 2a [Source:ZFIN;Acc:ZDB-GENE-041010-85]
47. si:dkey-245p14.4 ENSDARG00000070320 418 1.667 0.722 - - - - 0.945 - - - si:dkey-245p14.4 [Source:ZFIN;Acc:ZDB-GENE-061207-63]
48. kif18a ENSDARG00000008022 546 1.661 - - - - - 0.905 - - 0.756 kinesin family member 18A [Source:ZFIN;Acc:ZDB-GENE-040426-862]
49. lin7c ENSDARG00000027322 3083 1.66 - 0.757 - - - - - 0.903 - lin-7 homolog C (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-041011-2]
50. prpf31 ENSDARG00000095904 526 1.657 - - - - - 0.869 - 0.788 - PRP31 pre-mRNA processing factor 31 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1561]
51. supt5h ENSDARG00000042724, ENSDARG00000111598 6419 1.657 - - - - - - 0.845 - 0.812 SPT5 homolog, DSIF elongation factor subunit [Source:ZFIN;Acc:ZDB-GENE-001207-1]
52. fam132a fam132a 498 1.656 - 0.774 - - - 0.882 - - -
53. cbln1 ENSDARG00000057296 165 1.654 0.706 - - - - 0.948 - - - cerebellin 1 precursor [Source:ZFIN;Acc:ZDB-GENE-040718-226]
54. CABZ01072954.1 CABZ01072954.1 2330 1.653 - - - - - 0.866 - 0.787 -
55. srcap ENSDARG00000005236 1740 1.653 - - - - - 0.918 0.735 - - Snf2-related CREBBP activator protein [Source:ZFIN;Acc:ZDB-GENE-041008-127]
56. smcr8a ENSDARG00000052818 559 1.651 - - - - - 0.865 - 0.786 - Smith-Magenis syndrome chromosome region, candidate 8a [Source:ZFIN;Acc:ZDB-GENE-071212-4]
57. h2afy2_1 ENSDARG00000087897 9887 1.646 - - - - - 0.825 0.821 - - H2A histone family, member Y2 [Source:ZFIN;Acc:ZDB-GENE-050913-114]
58. nptx1l ENSDARG00000074671 569 1.644 0.761 - - - - 0.883 - - - neuronal pentraxin 1 like [Source:ZFIN;Acc:ZDB-GENE-040426-2418]
59. mafg2 mafg2 1041 1.643 - - - - - 0.791 - - 0.852
60. myo1b ENSDARG00000024694 1761 1.641 - - - - - 0.809 - - 0.832 myosin IB [Source:ZFIN;Acc:ZDB-GENE-030131-695]
61. pdcd2l ENSDARG00000002754 417 1.641 - 0.750 - - - 0.891 - - - programmed cell death 2-like [Source:ZFIN;Acc:ZDB-GENE-040426-967]
62. seta ENSDARG00000031495 39977 1.64 - - - - - 0.798 - 0.842 - SET nuclear proto-oncogene a [Source:ZFIN;Acc:ZDB-GENE-030131-2221]
63. ctbp2 ctbp2 3255 1.638 - 0.836 - - - 0.802 - - -
64. RNF5 ENSDARG00000075606 1730 1.636 - - - - - 0.865 - 0.771 - ring finger protein 5 [Source:HGNC Symbol;Acc:HGNC:10068]
65. sp1 ENSDARG00000088347 1697 1.635 - - - - - 0.865 - 0.770 - sp1 transcription factor [Source:ZFIN;Acc:ZDB-GENE-030131-2829]
66. RBM12B ENSDARG00000079717 541 1.635 - - - - - 0.789 - - 0.846 RNA binding motif protein 12B [Source:ZFIN;Acc:ZDB-GENE-030131-6428]
67. syt9a ENSDARG00000003994 298 1.633 0.720 - - - - 0.913 - - - synaptotagmin IXa [Source:ZFIN;Acc:ZDB-GENE-031002-18]
68. RABL6 RABL6 1795 1.633 - - - - - - 0.709 0.924 -
69. nr2f2 ENSDARG00000040926 5213 1.633 - - - - - - 0.736 0.897 - nuclear receptor subfamily 2, group F, member 2 [Source:ZFIN;Acc:ZDB-GENE-990415-252]
70. CABZ01084569.1 CABZ01084569.1 650 1.631 - - - - - 0.838 - - 0.793
71. C9H2orf69 C9H2orf69 148 1.623 0.756 - - - - 0.867 - - -
72. CASK CASK 1750 1.623 - - - - - 0.849 - - 0.774
73. pdlim5a ENSDARG00000101777 357 1.623 - - - - - 0.779 - - 0.844 PDZ and LIM domain 5a [Source:ZFIN;Acc:ZDB-GENE-040718-401]
74. nedd4l ENSDARG00000060006 1669 1.621 - - - - - 0.877 0.744 - - neural precursor cell expressed, developmentally down-regulated 4-like [Source:ZFIN;Acc:ZDB-GENE-051118-2]
75. tsc22d1 ENSDARG00000038306 2413 1.619 - - - - - - 0.786 - 0.833 TSC22 domain family, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7785]
76. tubgcp2 ENSDARG00000013079 1520 1.617 - - - - - 0.842 - 0.775 - tubulin, gamma complex associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-031118-150]
77. PHB2 PHB2 3755 1.617 - - - - - - - 0.806 0.811
78. pknox1.1 ENSDARG00000018765 2149 1.613 - - - - - 0.831 - - 0.782 pbx/knotted 1 homeobox 1.1 [Source:ZFIN;Acc:ZDB-GENE-020122-5]
79. SPAG9 ENSDARG00000078142 629 1.613 - 0.836 - - - - - 0.777 - sperm associated antigen 9 [Source:HGNC Symbol;Acc:HGNC:14524]
80. unc119b ENSDARG00000044362 1528 1.611 - - - - - 0.857 - 0.754 - unc-119 homolog b (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-050201-2]
81. asnsd1 830 1.607 - - - - - 0.820 - 0.787 - asparagine synthetase domain containing 1, transcript variant X1
82. ZNF462 ENSDARG00000112909 1132 1.603 - - - - - 0.737 - - 0.866 zinc finger protein 462 [Source:HGNC Symbol;Acc:HGNC:21684]
83. si:dkey-180p18.9 381 1.603 - - - - - 0.855 - 0.748 - si:dkey-180p18.9
84. CDC42SE2 ENSDARG00000094577, ENSDARG00000113403 606 1.602 - - - - - 0.812 - 0.790 - CDC42 small effector 2 [Source:ZFIN;Acc:ZDB-GENE-080204-45]
85. atp2b3b ENSDARG00000023445 1424 1.602 0.754 - - - - 0.848 - - - ATPase plasma membrane Ca2+ transporting 3b [Source:ZFIN;Acc:ZDB-GENE-080409-2]
86. xylt1 ENSDARG00000061248 2357 1.601 - - - - - 0.843 - 0.758 - xylosyltransferase I [Source:ZFIN;Acc:ZDB-GENE-111017-2]
87. cadm4 ENSDARG00000040291 2284 1.601 - - - - - 0.816 - - 0.785 cell adhesion molecule 4 [Source:ZFIN;Acc:ZDB-GENE-041114-138]
88. cwc25 ENSDARG00000003382 2134 1.6 - - - - - 0.775 - - 0.825 CWC25 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-2817]
89. qki2 ENSDARG00000010018 2230 1.598 - 0.773 - - - 0.825 - - - QKI, KH domain containing, RNA binding 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1462]
90. arfip1 ENSDARG00000070055, ENSDARG00000116473 3113 1.594 - - - - - - 0.770 - 0.824 ADP-ribosylation factor interacting protein 1 (arfaptin 1) [Source:ZFIN;Acc:ZDB-GENE-040426-2690]
91. irx5a ENSDARG00000034043 1694 1.593 - - - - - - - 0.789 0.804 iroquois homeobox 5a [Source:ZFIN;Acc:ZDB-GENE-010716-2]
92. gpm6ba ENSDARG00000005739, ENSDARG00000110895 1177 1.592 - - - - - 0.807 - - 0.785 glycoprotein M6Ba [Source:ZFIN;Acc:ZDB-GENE-030710-9]
93. rab23 ENSDARG00000004151 1077 1.591 - - - - - 0.815 - 0.776 - RAB23, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-050522-328]
94. lhx5 ENSDARG00000057936 785 1.59 - - - - - 0.821 - - 0.769 LIM homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-484]
95. st8sia2 ENSDARG00000018788 2183 1.589 - - - - - 0.736 - - 0.853 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-020919-4]
96. prpf4bb ENSDARG00000040310 2260 1.587 - - - - - - - 0.774 0.813 pre-mRNA processing factor 4Bb [Source:ZFIN;Acc:ZDB-GENE-040426-2799]
97. hnrnpd ENSDARG00000059246, ENSDARG00000109297, ENSDARG00000113453 3440 1.586 - - - - - - 0.778 - 0.808 heterogeneous nuclear ribonucleoprotein D [Source:ZFIN;Acc:ZDB-GENE-070424-97]
98. LGR4 ENSDARG00000060542 1222 1.581 - 0.866 - - - - 0.715 - - leucine-rich repeat containing G protein-coupled receptor 4 [Source:ZFIN;Acc:ZDB-GENE-111013-1]
99. nrn1a ENSDARG00000071860 1311 1.581 - - - - - 0.820 - - 0.761 neuritin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-212]
100. vhl ENSDARG00000070617 663 1.577 - 0.712 - - - 0.865 - - - von Hippel-Lindau tumor suppressor [Source:ZFIN;Acc:ZDB-GENE-070112-1042]

There are 2538 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA