Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for palb2

Gene Name Gene ID Reads Annotation
palb2 ENSDARG00000076716 170 partner and localizer of BRCA2 [Source:ZFIN;Acc:ZDB-GENE-090313-43]










Genes with expression patterns similar to palb2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. palb2 ENSDARG00000076716 170 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 partner and localizer of BRCA2 [Source:ZFIN;Acc:ZDB-GENE-090313-43]
2. BX537305.1 ENSDARG00000113834 10 1.607 0.783 - - - - - 0.824 - -
3. C25H12orf5 C25H12orf5 65 1.567 - - - - - 0.826 0.741 - -
4. PLEKHA2 PLEKHA2 43 1.546 - - - - - 0.732 0.814 - -
5. si:ch211-152p11.8 46 1.528 - - - - - 0.714 0.814 - - si:ch211-152p11.8, transcript variant X2
6. CCDC120 ENSDARG00000032856, ENSDARG00000114382 30 1 1.000 - - - - - - - - coiled-coil domain containing 120 [Source:ZFIN;Acc:ZDB-GENE-061027-93]
7. rbpms2a ENSDARG00000045930 234 0.957 0.957 - - - - - - - - RNA binding protein, mRNA processing factor 2a [Source:ZFIN;Acc:ZDB-GENE-040718-106]
8. agpat9l ENSDARG00000006491, ENSDARG00000109952, ENSDARG00000112415 191 0.922 - - - - - 0.922 - - - 1-acylglycerol-3-phosphate O-acyltransferase 9, like [Source:ZFIN;Acc:ZDB-GENE-060531-19]
9. adam8b ENSDARG00000057644 108 0.908 - - - - - - 0.908 - - ADAM metallopeptidase domain 8b [Source:ZFIN;Acc:ZDB-GENE-070808-1]
10. slx4ip ENSDARG00000039069 260 0.902 - - - - - - 0.902 - - SLX4 interacting protein [Source:ZFIN;Acc:ZDB-GENE-040426-1365]
11. si:ch1073-228j22.1 ENSDARG00000095799 98 0.901 - - - - - - 0.901 - - si:ch1073-228j22.1 [Source:ZFIN;Acc:ZDB-GENE-110411-219]
12. cog5 ENSDARG00000008235 222 0.898 - 0.898 - - - - - - - component of oligomeric golgi complex 5 [Source:ZFIN;Acc:ZDB-GENE-041210-47]
13. mecom ENSDARG00000060808 8 0.897 0.897 - - - - - - - - MDS1 and EVI1 complex locus [Source:ZFIN;Acc:ZDB-GENE-050208-123]
14. CABZ01073654.1 CABZ01073654.1 16 0.892 - - - - - - 0.892 - -
15. ATP10B ENSDARG00000076230 989 0.88 - - - - - - 0.880 - - ATPase phospholipid transporting 10B [Source:ZFIN;Acc:ZDB-GENE-130530-796]
16. rabggta ENSDARG00000061024 332 0.879 - - - - - - 0.879 - - Rab geranylgeranyltransferase subunit alpha [Source:ZFIN;Acc:ZDB-GENE-060929-1042]
17. kdelc1 ENSDARG00000031971, ENSDARG00000109619, ENSDARG00000112803 249 0.876 0.876 - - - - - - - - KDEL (Lys-Asp-Glu-Leu) containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-878]
18. gtpbp10 ENSDARG00000040300 533 0.872 - 0.872 - - - - - - - GTP-binding protein 10 (putative) [Source:ZFIN;Acc:ZDB-GENE-040718-153]
19. kcnj8 ENSDARG00000045589 92 0.865 - - - - - 0.865 - - - potassium inwardly-rectifying channel, subfamily J, member 8 [Source:ZFIN;Acc:ZDB-GENE-060308-1]
20. si:dkey-7a20.9 si:dkey-7a20.9 154 0.864 - - - - - - 0.864 - -
21. ccr10 ENSDARG00000040643 255 0.862 0.862 - - - - - - - - chemokine (C-C motif) receptor 10 [Source:ZFIN;Acc:ZDB-GENE-040718-424]
22. cxcr3.2 ENSDARG00000041041, ENSDARG00000113356 36 0.857 0.857 - - - - - - - - chemokine (C-X-C motif) receptor 3, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-041114-186]
23. cabp2b ENSDARG00000052277 119 0.853 - - - - - - 0.853 - - calcium binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-081028-55]
24. P2RY13 ENSDARG00000069944 11 0.849 - - - - - - 0.849 - - purinergic receptor P2Y13 [Source:ZFIN;Acc:ZDB-GENE-110208-5]
25. RAI1 ENSDARG00000076679 59 0.847 - - - - - - 0.847 - - retinoic acid induced 1 [Source:ZFIN;Acc:ZDB-GENE-101203-2]
26. CECR5 632 0.845 - - - - - - 0.845 - - cat eye syndrome chromosome region, candidate 5
27. FUK ENSDARG00000032650 20 0.844 - - - - - - 0.844 - - fucokinase [Source:ZFIN;Acc:ZDB-GENE-110819-1]
28. SLC37A3 176 0.844 - - - - - - 0.844 - - solute carrier family 37 member 3, transcript variant X4
29. C9HXorf36 C9HXorf36 44 0.844 - - - - - - 0.844 - -
30. hsp70l_1 ENSDARG00000055723 72 0.844 - - - - - - 0.844 - - heat shock cognate 70-kd protein, like [Source:ZFIN;Acc:ZDB-GENE-050321-1]
31. si:dkey-189o20.1 si:dkey-189o20.1 47 0.844 - - - - - - 0.844 - -
32. slc16a8 ENSDARG00000045153 478 0.84 - - - - - 0.840 - - - solute carrier family 16 (monocarboxylate transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-121128-1]
33. f2rl1.1 ENSDARG00000068856 47 0.84 - - - - - - 0.840 - - coagulation factor II (thrombin) receptor-like 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-061215-140]
34. hspbp1 ENSDARG00000102937 260 0.837 - 0.837 - - - - - - - HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1 [Source:ZFIN;Acc:ZDB-GENE-030219-55]
35. cactin ENSDARG00000059866 553 0.837 - - - - - 0.837 - - - cactin [Source:ZFIN;Acc:ZDB-GENE-060503-322]
36. si:ch211-71m22.1 ENSDARG00000058638 169 0.835 - - - - - - 0.835 - - si:ch211-71m22.1 [Source:ZFIN;Acc:ZDB-GENE-070705-193]
37. TJP1 TJP1 153 0.833 - - - - - - 0.833 - -
38. slc16a12a ENSDARG00000017773 47 0.833 - - - - - 0.833 - - - solute carrier family 16, member 12a [Source:ZFIN;Acc:ZDB-GENE-080721-24]
39. DAPK2 DAPK2 283 0.833 - 0.833 - - - - - - -
40. ubxn1_1 ENSDARG00000090309 38 0.833 - - - - - - 0.833 - - UBX domain protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-792]
41. si:ch211-237l4.6 ENSDARG00000056915 49 0.832 - - - - - - 0.832 - - si:ch211-237l4.6 [Source:ZFIN;Acc:ZDB-GENE-040724-42]
42. si:dkey-20i20.8 ENSDARG00000071714, ENSDARG00000094343 41 0.832 - - - - - - 0.832 - - si:dkey-20i20.8 [Source:ZFIN;Acc:ZDB-GENE-060503-59]
43. sim1a ENSDARG00000023316 190 0.832 0.832 - - - - - - - - SIM bHLH transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-020829-1]
44. dusp8a ENSDARG00000009299 1302 0.832 - 0.832 - - - - - - - dual specificity phosphatase 8a [Source:ZFIN;Acc:ZDB-GENE-040426-1842]
45. ARSJ ENSDARG00000077590 684 0.831 - - - - - - 0.831 - - arylsulfatase family, member J [Source:ZFIN;Acc:ZDB-GENE-111215-1]
46. fam214b ENSDARG00000068650 134 0.831 - - - - - - 0.831 - - family with sequence similarity 214, member B [Source:ZFIN;Acc:ZDB-GENE-060526-330]
47. wu:fc75a09 ENSDARG00000111625 289 0.83 - - - - - - 0.830 - - wu:fc75a09 [Source:ZFIN;Acc:ZDB-GENE-030131-4139]
48. neurla neurla 465 0.829 - 0.829 - - - - - - -
49. fam155b ENSDARG00000060152, ENSDARG00000114398 221 0.828 - - - - - - 0.828 - - family with sequence similarity 155, member B [Source:ZFIN;Acc:ZDB-GENE-060526-303]
50. CU694315.1 CU694315.1 87 0.825 0.825 - - - - - - - -
51. pth2r ENSDARG00000006678, ENSDARG00000112414 46 0.824 - - - - - - 0.824 - - parathyroid hormone 2 receptor [Source:ZFIN;Acc:ZDB-GENE-991123-10]
52. FRMD7 ENSDARG00000068958 17 0.824 - - - - - - 0.824 - - FERM domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-060825-67]
53. st6galnac ENSDARG00000086292 29 0.824 - - - - - - 0.824 - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase [Source:ZFIN;Acc:ZDB-GENE-050309-58]
54. si:dkey-41e15.4 si:dkey-41e15.4 1 0.824 - - - - - - 0.824 - -
55. MMP20 MMP20 1 0.824 - - - - - - 0.824 - -
56. nr6a1a ENSDARG00000096224, ENSDARG00000101508 24 0.824 - - - - - - 0.824 - - nuclear receptor subfamily 6, group A, member 1a [Source:ZFIN;Acc:ZDB-GENE-991207-19]
57. CLNK 8 0.824 - - - - - - 0.824 - - cytokine dependent hematopoietic cell linker
58. ms4a17a.17 ENSDARG00000054898, ENSDARG00000116378 37 0.824 - - - - - - 0.824 - - membrane-spanning 4-domains, subfamily A, member 17A.17 [Source:ZFIN;Acc:ZDB-GENE-070424-27]
59. mtus2 mtus2 22 0.824 - - - - - - 0.824 - -
60. si:ch211-226h8.4 ENSDARG00000086221, ENSDARG00000113147 38 0.824 - - - - - - 0.824 - - si:ch211-226h8.4 [Source:ZFIN;Acc:ZDB-GENE-050208-376]
61. si:ch211-234c11.3_1 ENSDARG00000093615 10 0.824 - - - - - - 0.824 - - si:ch211-234c11.3 [Source:ZFIN;Acc:ZDB-GENE-110914-93]
62. CU855711.1 ENSDARG00000088643 6 0.824 - - - - - - 0.824 - - legumain-like [Source:NCBI gene;Acc:108191752]
63. si:ch211-12e1.5 si:ch211-12e1.5 14 0.824 - - - - - - 0.824 - -
64. BX901974.1 ENSDARG00000067592 2 0.824 - - - - - - 0.824 - -
65. zgc:171551 ENSDARG00000073708, ENSDARG00000111940 24 0.824 - - - - - - 0.824 - - zgc:171551 [Source:ZFIN;Acc:ZDB-GENE-080220-8]
66. SPDEF ENSDARG00000029930 60 0.824 - - - - - - 0.824 - - SAM pointed domain containing ETS transcription factor [Source:HGNC Symbol;Acc:HGNC:17257]
67. fscn1b ENSDARG00000037747, ENSDARG00000111370 75 0.824 - - - - - - 0.824 - - fascin actin-bundling protein 1b [Source:ZFIN;Acc:ZDB-GENE-120507-1]
68. CU929052.1 CU929052.1 642 0.824 - - - - - - 0.824 - -
69. slc5a1 ENSDARG00000013871 4 0.824 - - - - - - 0.824 - - solute carrier family 5 (sodium/glucose cotransporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1524]
70. si:ch211-239f4.6 ENSDARG00000093347 2 0.824 - - - - - - 0.824 - - si:ch211-239f4.6 [Source:ZFIN;Acc:ZDB-GENE-061009-18]
71. CR762480.2 ENSDARG00000102728 1 0.824 - - - - - - 0.824 - -
72. nitr3a_1 ENSDARG00000110676 44 0.824 - - - - - - 0.824 - - novel immune-type receptor 3a [Source:NCBI gene;Acc:60649]
73. TMEM138 ENSDARG00000090543 105 0.824 - - - - - - 0.824 - - transmembrane protein 138 [Source:ZFIN;Acc:ZDB-GENE-120912-1]
74. si:ch211-122l24.5 si:ch211-122l24.5 1 0.824 - - - - - - 0.824 - -
75. dctn1a ENSDARG00000019743 45 0.824 - - - - - - 0.824 - - dynactin 1a [Source:ZFIN;Acc:ZDB-GENE-070117-2205]
76. sh2d1aa ENSDARG00000095348 4 0.824 - - - - - - 0.824 - - SH2 domain containing 1A duplicate a [Source:ZFIN;Acc:ZDB-GENE-060526-212]
77. si:ch211-283l16.1 ENSDARG00000112586 131 0.824 - - - - - - 0.824 - - si:ch211-283l16.1 [Source:ZFIN;Acc:ZDB-GENE-110913-44]
78. PLEKHS1_2 PLEKHS1_2 21 0.824 - - - - - - 0.824 - -
79. CECR6 25 0.824 - - - - - - 0.824 - - cat eye syndrome chromosome region, candidate 6
80. SIKE1 2 0.824 - - - - - - 0.824 - - suppressor of IKBKE 1, transcript variant X3
81. gabrr2b ENSDARG00000014057 9 0.824 - - - - - - 0.824 - - gamma-aminobutyric acid (GABA) A receptor, rho 2b [Source:ZFIN;Acc:ZDB-GENE-041014-174]
82. mmrn2a ENSDARG00000076135 37 0.824 - - - - - - 0.824 - - multimerin 2a [Source:ZFIN;Acc:ZDB-GENE-080424-3]
83. si:dkey-28k24.2 ENSDARG00000095106, ENSDARG00000104787, ENSDARG00000110878, ENSDARG00000116574 1 0.824 - - - - - - 0.824 - - si:dkey-28k24.2 [Source:ZFIN;Acc:ZDB-GENE-121213-4]
84. si:dkey-58f10.11 ENSDARG00000094935 1 0.824 - - - - - - 0.824 - - si:dkey-58f10.11 [Source:ZFIN;Acc:ZDB-GENE-060526-313]
85. CABZ01002626.1 CABZ01002626.1 29 0.824 - - - - - - 0.824 - -
86. ucn3l ENSDARG00000087241 29 0.824 - - - - - - 0.824 - - urocortin 3, like [Source:ZFIN;Acc:ZDB-GENE-060130-250]
87. CU672227.1 ENSDARG00000105807 15 0.824 - - - - - - 0.824 - -
88. SEMA6B SEMA6B 35 0.824 - - - - - - 0.824 - -
89. GALNTL6 ENSDARG00000040048 33 0.824 - - - - - - 0.824 - - polypeptide N-acetylgalactosaminyltransferase like 6 [Source:HGNC Symbol;Acc:HGNC:33844]
90. si:ch211-233h19.2 ENSDARG00000042213 47 0.824 - - - - - - 0.824 - - si:ch211-233h19.2 [Source:ZFIN;Acc:ZDB-GENE-061009-14]
91. rspo1 ENSDARG00000104340, ENSDARG00000111655 13 0.824 - - - - - - 0.824 - - R-spondin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-44]
92. si:ch211-218m3.16 ENSDARG00000044336 33 0.824 - - - - - - 0.824 - - si:ch211-218m3.16 [Source:ZFIN;Acc:ZDB-GENE-091116-19]
93. U1_38 U1_38 1 0.824 - - - - - - 0.824 - -
94. CABZ01031933.1 CABZ01031933.1 1 0.824 - - - - - - 0.824 - -
95. si:ch73-189n23.1 ENSDARG00000086247 15 0.824 - - - - - - 0.824 - - si:ch73-189n23.1 [Source:ZFIN;Acc:ZDB-GENE-070705-217]
96. npffr1l3 ENSDARG00000010712 18 0.824 - - - - - - 0.824 - - neuropeptide FF receptor 1 like 3 [Source:ZFIN;Acc:ZDB-GENE-070424-44]
97. CR388163.4 CR388163.4 4 0.824 - - - - - - 0.824 - -
98. CABZ01034857.1 CABZ01034857.1 1 0.824 - - - - - - 0.824 - -
99. g6pcb ENSDARG00000014967 8 0.824 - - - - - - 0.824 - - glucose-6-phosphatase b, catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-081223-2]
100. tbx5b ENSDARG00000092060 37 0.824 - - - - - - 0.824 - - T-box 5b [Source:ZFIN;Acc:ZDB-GENE-060601-2]

There are 425 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA