Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for pak4

Gene Name Gene ID Reads Annotation
pak4 ENSDARG00000018110 1962 p21 protein (Cdc42/Rac)-activated kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040704-69]










Genes with expression patterns similar to pak4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pak4 ENSDARG00000018110 1962 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 p21 protein (Cdc42/Rac)-activated kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040704-69]
2. fam135a ENSDARG00000059843 2352 2.55 - - 0.922 0.860 - - 0.768 - - family with sequence similarity 135, member A [Source:ZFIN;Acc:ZDB-GENE-080130-1]
3. sec22a ENSDARG00000078328 1207 2.513 - 0.830 0.919 0.764 - - - - - SEC22 homolog A, vesicle trafficking protein [Source:ZFIN;Acc:ZDB-GENE-030131-3553]
4. ptger4b ENSDARG00000035415, ENSDARG00000109430 970 2.487 - 0.734 0.923 - - 0.830 - - - prostaglandin E receptor 4 (subtype EP4) b [Source:ZFIN;Acc:ZDB-GENE-060531-102]
5. mical2b ENSDARG00000020395 470 2.212 0.712 - - 0.799 - 0.701 - - - microtubule associated monooxygenase, calponin and LIM domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-061207-15]
6. casp7 ENSDARG00000091836 657 2.131 - 0.703 - - - 0.711 - 0.717 - caspase 7, apoptosis-related cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-050522-506]
7. pdlim1 ENSDARG00000019845 5765 1.74 - - 0.909 - - 0.831 - - - PDZ and LIM domain 1 (elfin) [Source:ZFIN;Acc:ZDB-GENE-030131-5227]
8. tcf3b ENSDARG00000099999, ENSDARG00000112646 3589 1.739 - - 0.898 - - - 0.841 - - transcription factor 3b [Source:ZFIN;Acc:ZDB-GENE-051113-64]
9. ube2g2 ENSDARG00000025404 1774 1.735 - 0.835 0.900 - - - - - - ubiquitin-conjugating enzyme E2G 2 (UBC7 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-050417-288]
10. rxraa ENSDARG00000057737 750 1.729 - - 0.920 - - 0.809 - - - retinoid X receptor, alpha a [Source:ZFIN;Acc:ZDB-GENE-070314-2]
11. CEP350 ENSDARG00000058000 2887 1.723 - 0.821 0.902 - - - - - - centrosomal protein 350 [Source:ZFIN;Acc:ZDB-GENE-030131-6975]
12. NRD1 NRD1 3486 1.72 - - 0.942 0.778 - - - - -
13. fbxw11b ENSDARG00000017230, ENSDARG00000112841 2593 1.717 - - 0.911 0.806 - - - - - F-box and WD repeat domain containing 11b [Source:ZFIN;Acc:ZDB-GENE-040426-2903]
14. cxxc1 cxxc1 914 1.714 - 0.795 0.919 - - - - - -
15. SVIL SVIL 2589 1.71 - - 0.884 - - 0.826 - - -
16. ube3c ENSDARG00000035978, ENSDARG00000112229 787 1.71 - - 0.918 0.792 - - - - - ubiquitin protein ligase E3C [Source:ZFIN;Acc:ZDB-GENE-040426-1211]
17. mybbp1a ENSDARG00000078214 2458 1.702 - - 0.933 0.769 - - - - - MYB binding protein (P160) 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9864]
18. nol9 ENSDARG00000077751 2471 1.698 - 0.800 0.898 - - - - - - nucleolar protein 9 [Source:ZFIN;Acc:ZDB-GENE-070629-1]
19. coro7 ENSDARG00000089616 2141 1.694 - 0.772 0.922 - - - - - - coronin 7 [Source:ZFIN;Acc:ZDB-GENE-050706-137]
20. rqcd1 2301 1.693 - 0.793 0.900 - - - - - - RCD1 required for cell differentiation1 homolog (S. pombe)
21. ZNF576 ZNF576 1447 1.691 0.775 - 0.916 - - - - - -
22. KIAA0355 3250 1.688 - 0.797 0.891 - - - - - - KIAA0355 ortholog, transcript variant X1
23. tbx3a ENSDARG00000002216 2270 1.687 - - 0.903 - - 0.784 - - - T-box 3a [Source:ZFIN;Acc:ZDB-GENE-070209-80]
24. thrap3b ENSDARG00000098228 4396 1.687 - 0.745 0.942 - - - - - - thyroid hormone receptor associated protein 3b [Source:ZFIN;Acc:ZDB-GENE-040516-9]
25. tmem176l.1 ENSDARG00000099491 860 1.664 - - - - - 0.801 0.863 - - transmembrane protein 176l.1 [Source:ZFIN;Acc:ZDB-GENE-080829-11]
26. srp19 ENSDARG00000035699 2624 1.662 - - 0.924 0.738 - - - - - signal recognition particle 19 [Source:ZFIN;Acc:ZDB-GENE-040426-2657]
27. znf703 ENSDARG00000035563, ENSDARG00000112912 2226 1.657 - 0.758 0.899 - - - - - - zinc finger protein 703 [Source:ZFIN;Acc:ZDB-GENE-010717-1]
28. ARHGAP23 ARHGAP23 3946 1.656 - 0.738 0.918 - - - - - -
29. clec16a ENSDARG00000038094 501 1.655 - - - 0.879 - - 0.776 - - C-type lectin domain containing 16A [Source:ZFIN;Acc:ZDB-GENE-040426-951]
30. usb1 ENSDARG00000003841 524 1.655 - - - 0.828 - - 0.827 - - U6 snRNA biogenesis 1 [Source:ZFIN;Acc:ZDB-GENE-040801-197]
31. zbtb18 ENSDARG00000028228 3653 1.651 - 0.734 0.917 - - - - - - zinc finger and BTB domain containing 18 [Source:ZFIN;Acc:ZDB-GENE-050419-73]
32. si:dkey-66i24.9 ENSDARG00000096689 796 1.646 0.758 - - 0.888 - - - - - si:dkey-66i24.9 [Source:ZFIN;Acc:ZDB-GENE-130531-63]
33. utp18 ENSDARG00000102618 1983 1.638 - - 0.887 - - - 0.751 - - UTP18 small subunit (SSU) processome component [Source:ZFIN;Acc:ZDB-GENE-060929-668]
34. C7H20orf27 C7H20orf27 1864 1.638 - - 0.874 - - 0.764 - - -
35. yipf2 ENSDARG00000021399 702 1.631 - - - 0.856 - 0.775 - - - Yip1 domain family, member 2 [Source:ZFIN;Acc:ZDB-GENE-040724-124]
36. pgd ENSDARG00000015343, ENSDARG00000117150 2512 1.628 - 0.815 - 0.813 - - - - - phosphogluconate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040426-2807]
37. creld2 ENSDARG00000029071, ENSDARG00000116264 333 1.627 - 0.720 - 0.907 - - - - - cysteine-rich with EGF-like domains 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1626]
38. si:dkey-14k9.3 ENSDARG00000045595 256 1.623 - - - 0.915 - - - 0.708 - si:dkey-14k9.3 [Source:ZFIN;Acc:ZDB-GENE-030131-2893]
39. CHORDC1 CHORDC1 544 1.622 - 0.779 - 0.843 - - - - -
40. tnni2a.2 ENSDARG00000005841 483 1.621 - - - 0.893 - - 0.728 - - troponin I type 2a (skeletal, fast), tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040426-970]
41. ankrd50l ENSDARG00000007077 1115 1.62 - 0.779 - 0.841 - - - - - ankyrin repeat domain 50-like [Source:ZFIN;Acc:ZDB-GENE-041008-117]
42. irs1 ENSDARG00000054087 1809 1.618 - 0.807 - 0.811 - - - - - insulin receptor substrate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-872]
43. si:ch211-120e1.6 si:ch211-120e1.6 292 1.616 - 0.704 - 0.912 - - - - -
44. sptbn2 ENSDARG00000053956 8452 1.615 - - 0.850 - - 0.765 - - - spectrin, beta, non-erythrocytic 2 [Source:ZFIN;Acc:ZDB-GENE-030131-787]
45. tra2b ENSDARG00000002168 3218 1.608 - - 0.868 0.740 - - - - - transformer 2 beta homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1094]
46. ints8 ENSDARG00000057986 1063 1.606 - 0.702 0.904 - - - - - - integrator complex subunit 8 [Source:ZFIN;Acc:ZDB-GENE-050522-556]
47. erlin1 ENSDARG00000021991 5664 1.603 - - 0.820 - - - 0.783 - - ER lipid raft associated 1 [Source:ZFIN;Acc:ZDB-GENE-050327-13]
48. clic1 ENSDARG00000103340 2235 1.6 - 0.883 - - - 0.717 - - - chloride intracellular channel 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3202]
49. afap1l2 ENSDARG00000074806 367 1.594 - - - 0.889 - 0.705 - - - actin filament associated protein 1-like 2 [Source:ZFIN;Acc:ZDB-GENE-100318-1]
50. ier5l ENSDARG00000054906, ENSDARG00000110793, ENSDARG00000114072 4216 1.587 - - 0.874 - - 0.713 - - - immediate early response 5-like [Source:ZFIN;Acc:ZDB-GENE-030131-5134]
51. prdm9 ENSDARG00000005382, ENSDARG00000110150 572 1.579 - 0.768 - 0.811 - - - - - PR domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-040426-1319]
52. kmt2ba ENSDARG00000062962 1572 1.561 - - - - - 0.717 0.844 - - lysine (K)-specific methyltransferase 2Ba [Source:ZFIN;Acc:ZDB-GENE-060503-376]
53. bcas3 ENSDARG00000090764, ENSDARG00000114497 601 1.557 - - - 0.759 - 0.798 - - - breast carcinoma amplified sequence 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1257]
54. cdc42ep3 ENSDARG00000052783 1485 1.553 - 0.819 - - - - 0.734 - - CDC42 effector protein (Rho GTPase binding) 3 [Source:ZFIN;Acc:ZDB-GENE-040912-89]
55. chchd1 ENSDARG00000029100 2121 1.55 - 0.802 - 0.748 - - - - - coiled-coil-helix-coiled-coil-helix domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060810-176]
56. map2k2a ENSDARG00000006609 856 1.548 - 0.826 - 0.722 - - - - - mitogen-activated protein kinase kinase 2a [Source:ZFIN;Acc:ZDB-GENE-041027-1]
57. slc2a8 ENSDARG00000104278 764 1.546 - - - - - 0.825 0.721 - - solute carrier family 2 (facilitated glucose transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-030829-25]
58. ak4 ENSDARG00000006546 1528 1.544 - - - 0.787 - - - 0.757 - adenylate kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2505]
59. rpn1 ENSDARG00000059323 10411 1.539 - 0.746 0.793 - - - - - - ribophorin I [Source:ZFIN;Acc:ZDB-GENE-030131-4286]
60. pop5 ENSDARG00000053452 1347 1.537 0.701 0.836 - - - - - - - POP5 homolog, ribonuclease P/MRP subunit [Source:ZFIN;Acc:ZDB-GENE-050320-123]
61. zgc:56095 ENSDARG00000018461 3360 1.536 - 0.757 0.779 - - - - - - zgc:56095 [Source:ZFIN;Acc:ZDB-GENE-040426-1948]
62. pltp ENSDARG00000104495 1037 1.534 - 0.817 - - - 0.717 - - - phospholipid transfer protein [Source:ZFIN;Acc:ZDB-GENE-040801-22]
63. GK2 GK2 813 1.531 0.726 - - 0.805 - - - - -
64. fibpa ENSDARG00000016058 2148 1.531 - - 0.824 - - - 0.707 - - fibroblast growth factor (acidic) intracellular binding protein a [Source:ZFIN;Acc:ZDB-GENE-040426-1363]
65. C21H17orf85 C21H17orf85 1167 1.526 - - - - - - 0.742 0.784 -
66. ARHGEF17 ENSDARG00000101644 625 1.524 - 0.718 - 0.806 - - - - - Rho guanine nucleotide exchange factor 17 [Source:HGNC Symbol;Acc:HGNC:21726]
67. TRIM14 TRIM14 1424 1.515 - 0.771 - 0.744 - - - - -
68. etv5b ENSDARG00000044511, ENSDARG00000113744 1967 1.51 - 0.769 - - - 0.741 - - - ets variant 5b [Source:ZFIN;Acc:ZDB-GENE-991228-4]
69. klf15 ENSDARG00000091127 1037 1.506 0.710 0.796 - - - - - - - Kruppel-like factor 15 [Source:ZFIN;Acc:ZDB-GENE-030131-7844]
70. Mar-06 Mar-06 953 1.506 - - - 0.786 - - 0.720 - -
71. asmtl ENSDARG00000021433, ENSDARG00000114151 550 1.487 - 0.701 - - - 0.786 - - - acetylserotonin O-methyltransferase-like [Source:ZFIN;Acc:ZDB-GENE-030131-2854]
72. LIMD2 ENSDARG00000078092 3414 1.487 - 0.714 - 0.773 - - - - - LIM domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-120906-1]
73. ywhae2 ENSDARG00000017014 5105 1.486 - 0.731 - - - - 0.755 - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-050306-44]
74. psmb2 ENSDARG00000031511 4016 1.482 - 0.744 - - - - 0.738 - - proteasome subunit beta 2 [Source:ZFIN;Acc:ZDB-GENE-040718-353]
75. SLC22A23 ENSDARG00000078856 2921 1.481 - 0.701 - - - 0.780 - - - solute carrier family 22, member 23 [Source:ZFIN;Acc:ZDB-GENE-030131-3564]
76. ppp1r13l ENSDARG00000013777 2260 1.481 - 0.741 - - - 0.740 - - - protein phosphatase 1, regulatory subunit 13 like [Source:ZFIN;Acc:ZDB-GENE-050327-33]
77. herpud1 ENSDARG00000024314 1207 1.477 - 0.766 - - - 0.711 - - - homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 [Source:ZFIN;Acc:ZDB-GENE-050913-47]
78. rps6ka3a ENSDARG00000035556, ENSDARG00000116641 3608 1.476 - - - 0.725 - 0.751 - - - ribosomal protein S6 kinase a, polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-030219-119]
79. kif2c ENSDARG00000076228 2281 1.475 - 0.773 - 0.702 - - - - - kinesin family member 2C [Source:ZFIN;Acc:ZDB-GENE-070912-298]
80. CABZ01080457.1 CABZ01080457.1 445 1.473 - - - 0.750 - 0.723 - - -
81. nolc1 ENSDARG00000024561 3457 1.473 - - - - - 0.755 0.718 - - nucleolar and coiled-body phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6349]
82. pla2g12a ENSDARG00000070454 742 1.471 0.716 - - - - 0.755 - - - phospholipase A2, group XIIA [Source:ZFIN;Acc:ZDB-GENE-070410-18]
83. oxsr1a ENSDARG00000034189 4314 1.468 - 0.715 - - - - 0.753 - - oxidative stress responsive 1a [Source:ZFIN;Acc:ZDB-GENE-070620-25]
84. psph ENSDARG00000040314 1359 1.46 - 0.722 - - - 0.738 - - - phosphoserine phosphatase [Source:ZFIN;Acc:ZDB-GENE-050809-127]
85. nat10 ENSDARG00000054259 1310 1.458 - - - - - - 0.706 0.752 - N-acetyltransferase 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1543]
86. C20H6orf58_1 C20H6orf58_1 216 1.455 - 0.704 - - - 0.751 - - -
87. ISCU ISCU 3648 1.452 - 0.743 - - - - 0.709 - -
88. THUMPD1 ENSDARG00000100264 966 1.451 - - - 0.742 - - 0.709 - - THUMP domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1805]
89. ankra2 ENSDARG00000035399, ENSDARG00000111289 1303 1.45 - 0.736 - - - - 0.714 - - ankyrin repeat, family A (RFXANK-like), 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2141]
90. mrpl9 ENSDARG00000063249 783 1.447 - - - 0.742 - - 0.705 - - mitochondrial ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-070717-4]
91. naa40 ENSDARG00000024109, ENSDARG00000090570 4759 1.446 - 0.740 - - - - 0.706 - - N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050417-105]
92. gspt1l ENSDARG00000098627 8381 1.445 - 0.739 - - - - 0.706 - - G1 to S phase transition 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-4009]
93. bmpr1ba ENSDARG00000104100 828 1.441 - 0.739 - 0.702 - - - - - bone morphogenetic protein receptor, type IBa [Source:ZFIN;Acc:ZDB-GENE-991208-8]
94. btbd10b ENSDARG00000020252 7251 1.441 - - - 0.740 - 0.701 - - - BTB (POZ) domain containing 10b [Source:ZFIN;Acc:ZDB-GENE-080104-5]
95. cks2 ENSDARG00000071410, ENSDARG00000116198 966 1.435 0.713 - - - - 0.722 - - - CDC28 protein kinase regulatory subunit 2 [Source:ZFIN;Acc:ZDB-GENE-050208-508]
96. ptpra ENSDARG00000001769, ENSDARG00000114615 1279 1.434 - - - 0.733 - 0.701 - - - protein tyrosine phosphatase, receptor type, A [Source:ZFIN;Acc:ZDB-GENE-020107-1]
97. nedd8 ENSDARG00000007989 3896 1.434 - 0.726 - - - - 0.708 - - neural precursor cell expressed, developmentally down-regulated 8 [Source:ZFIN;Acc:ZDB-GENE-030616-588]
98. zgc:136474 zgc:136474 658 1.431 - - - 0.726 - 0.705 - - -
99. sod1 ENSDARG00000043848 1514 1.413 - - - - - 0.711 0.702 - - superoxide dismutase 1, soluble [Source:ZFIN;Acc:ZDB-GENE-990415-258]
100. COLGALT1 ENSDARG00000073974 5069 0.986 - - 0.986 - - - - - - collagen beta(1-O)galactosyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-070720-6]

There are 1334 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA