Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for pak1_1

Gene Name Gene ID Reads Annotation
pak1_1 ENSDARG00000103959 28 p21 protein (Cdc42/Rac)-activated kinase 1 [Source:ZFIN;Acc:ZDB-GENE-030826-29]










Genes with expression patterns similar to pak1_1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pak1_1 ENSDARG00000103959 28 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 p21 protein (Cdc42/Rac)-activated kinase 1 [Source:ZFIN;Acc:ZDB-GENE-030826-29]
2. MASP1 ENSDARG00000068726 34 2.163 0.723 0.737 - - - 0.703 - - - mannan-binding lectin serine peptidase 1 [Source:ZFIN;Acc:ZDB-GENE-110421-4]
3. fbxo43 ENSDARG00000104186 40 2 1.000 - - - - 1.000 - - - F-box protein 43 [Source:ZFIN;Acc:ZDB-GENE-040426-1645]
4. CR936540.2 CR936540.2 4 2 1.000 - - - - - - 1.000 -
5. si:dkey-51d8.6 ENSDARG00000090769 17 1.954 1.000 - - - 0.954 - - - - si:dkey-51d8.6 [Source:ZFIN;Acc:ZDB-GENE-110914-115]
6. ifnlr1 ENSDARG00000087131 73 1.919 - - - - 0.919 1.000 - - - interferon lambda receptor 1 [Source:ZFIN;Acc:ZDB-GENE-071120-5]
7. rpph1 33 1.906 0.954 - - - 0.952 - - - - ribonuclease P RNA component H1
8. C3AR1 18 1.871 1.000 - - - - - - 0.871 - C3a anaphylatoxin chemotactic receptor
9. mamdc2b ENSDARG00000073695 26 1.859 1.000 - - - - 0.859 - - - MAM domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-091117-16]
10. aven ENSDARG00000002894 49 1.852 - 0.852 - - - 1.000 - - - apoptosis, caspase activation inhibitor [Source:ZFIN;Acc:ZDB-GENE-041001-171]
11. zgc:163077 ENSDARG00000101593 60 1.843 1.000 - - - 0.843 - - - - zgc:163077 [Source:ZFIN;Acc:ZDB-GENE-070521-6]
12. dmrt2b ENSDARG00000070013, ENSDARG00000114365, ENSDARG00000114967 57 1.797 - - - - - 1.000 - 0.797 - doublesex and mab-3 related transcription factor 2b [Source:ZFIN;Acc:ZDB-GENE-080813-1]
13. zdhhc12a ENSDARG00000076632 13 1.794 - - 0.883 - 0.911 - - - - zinc finger, DHHC-type containing 12a [Source:ZFIN;Acc:ZDB-GENE-081104-40]
14. acvr2b 111 1.791 - 0.832 - - - 0.959 - - - activin A receptor, type IIB
15. fbxo36a ENSDARG00000010662, ENSDARG00000109843 13 1.788 - 0.788 - - - 1.000 - - - F-box protein 36a [Source:ZFIN;Acc:ZDB-GENE-060929-986]
16. si:ch211-191a6.3 si:ch211-191a6.3 6 1.788 1.000 0.788 - - - - - - -
17. carm1l ENSDARG00000091531 13 1.786 - - - - - 1.000 0.786 - - coactivator-associated arginine methyltransferase 1, like [Source:ZFIN;Acc:ZDB-GENE-090312-219]
18. CAMSAP2 CAMSAP2 109 1.761 - 0.761 - - - 1.000 - - -
19. lifra ENSDARG00000098857 11 1.749 - 0.977 0.772 - - - - - - leukemia inhibitory factor receptor alpha a [Source:ZFIN;Acc:ZDB-GENE-050327-16]
20. CABZ01068153.1 CABZ01068153.1 211 1.745 0.945 0.800 - - - - - - -
21. CABZ01063077.1 CABZ01063077.1 22 1.74 0.952 0.788 - - - - - - -
22. CABZ01035647.1 CABZ01035647.1 5 1.728 - - - - - 1.000 - - 0.728
23. EXT1_1 EXT1_1 3 1.728 - - - - - - - 1.000 0.728
24. si:dkey-179k24.3 si:dkey-179k24.3 3 1.71 1.000 - - - - 0.710 - - -
25. DEPDC7 19 1.704 - - - - 0.704 1.000 - - - DEP domain containing 7, transcript variant X1
26. pbx3b ENSDARG00000013615, ENSDARG00000110194 11 1.701 - 0.776 0.925 - - - - - - pre-B-cell leukemia homeobox 3b [Source:ZFIN;Acc:ZDB-GENE-000405-3]
27. LIX1 ENSDARG00000052154 9 1.676 0.723 - - - 0.953 - - - - limb and CNS expressed 1 [Source:ZFIN;Acc:ZDB-GENE-060526-123]
28. STRC ENSDARG00000105391 10 1.667 - - - - 0.965 - - 0.702 - stereocilin [Source:ZFIN;Acc:ZDB-GENE-160114-58]
29. syt9b ENSDARG00000029239 31 1.65 0.905 - 0.745 - - - - - - synaptotagmin IXb [Source:ZFIN;Acc:ZDB-GENE-040822-6]
30. POLR2M ENSDARG00000074968, ENSDARG00000113507 137 1.64 0.905 - - - - - 0.735 - - RNA polymerase II subunit M [Source:ZFIN;Acc:ZDB-GENE-160728-95]
31. gabbr2 ENSDARG00000061042 122 1.636 - 0.721 - - 0.915 - - - - gamma-aminobutyric acid (GABA) B receptor, 2 [Source:ZFIN;Acc:ZDB-GENE-060503-620]
32. alg6 ENSDARG00000017617 483 1.628 - - - - 0.867 - 0.761 - - asparagine-linked glycosylation 6 (alpha-1,3,-glucosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-040808-45]
33. ptpn5 ENSDARG00000074866 548 1.604 0.704 0.900 - - - - - - - protein tyrosine phosphatase, non-receptor type 5 [Source:ZFIN;Acc:ZDB-GENE-101028-3]
34. cldn19 ENSDARG00000044569 281 1.6 0.857 0.743 - - - - - - - claudin 19 [Source:ZFIN;Acc:ZDB-GENE-050417-242]
35. CR847511.1 CR847511.1 80 1.585 0.865 - - - - 0.720 - - -
36. htr1ab ENSDARG00000057098, ENSDARG00000113207 92 1.575 0.865 - - - - 0.710 - - - 5-hydroxytryptamine (serotonin) receptor 1A b [Source:ZFIN;Acc:ZDB-GENE-090409-2]
37. CABZ01055343.2_1 CABZ01055343.2_1 6 1.565 - - 0.837 - - - - - 0.728
38. si:dkey-121a11.3 ENSDARG00000071458 118 1.547 0.803 - - - - - 0.744 - - si:dkey-121a11.3 [Source:ZFIN;Acc:ZDB-GENE-050208-417]
39. FBXO40_1 FBXO40_1 59 1.527 - - - - - 0.787 0.740 - -
40. si:dkey-93n13.2 ENSDARG00000092816 119 1.516 0.778 - - - 0.738 - - - - si:dkey-93n13.2 [Source:ZFIN;Acc:ZDB-GENE-091204-177]
41. GBE1 GBE1 12 1.503 - 0.775 - - - - - - 0.728
42. foxd1 ENSDARG00000029179 726 1.494 0.762 - - - - - 0.732 - - forkhead box D1 [Source:ZFIN;Acc:ZDB-GENE-040426-2094]
43. nt5c1ba ENSDARG00000018153 31 1.494 - 0.764 0.730 - - - - - - 5'-nucleotidase, cytosolic IB a [Source:ZFIN;Acc:ZDB-GENE-070424-103]
44. timm17b ENSDARG00000060124 125 1.483 0.745 - - - - 0.738 - - - translocase of inner mitochondrial membrane 17 homolog B (yeast) [Source:ZFIN;Acc:ZDB-GENE-081104-144]
45. themis ENSDARG00000010619 5 1 - - - - - - - 1.000 - thymocyte selection associated [Source:ZFIN;Acc:ZDB-GENE-041008-160]
46. si:ch73-155e10.1 si:ch73-155e10.1 13 1 1.000 - - - - - - - -
47. TSPEAR TSPEAR 9 1 - - - - - - - 1.000 -
48. si:ch73-381a20.2 si:ch73-381a20.2 11 1 - - - - - 1.000 - - -
49. CABZ01118678.1 ENSDARG00000091359 2 1 1.000 - - - - - - - - calmodulin-regulated spectrin-associated protein 3-like [Source:NCBI gene;Acc:100007608]
50. si:dkey-250k10.4 ENSDARG00000099751 2 1 - - - - - 1.000 - - - si:dkey-250k10.4 [Source:ZFIN;Acc:ZDB-GENE-120703-22]
51. si:ch211-113a14.14_1 si:ch211-113a14.14_1 7 1 - - - - - - - 1.000 -
52. esyt1b ENSDARG00000014239 8 1 - - - - - 1.000 - - - extended synaptotagmin-like protein 1b [Source:ZFIN;Acc:ZDB-GENE-040724-209]
53. tpgs2 ENSDARG00000011926 48 1 - - - - - 1.000 - - - tubulin polyglutamylase complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040704-49]
54. si:dkey-122c11.4 si:dkey-122c11.4 13 1 1.000 - - - - - - - -
55. si:dkey-226m8.9 si:dkey-226m8.9 4 1 - - - - - - - 1.000 -
56. slc4a4b ENSDARG00000044808 9 1 - - - - - 1.000 - - - solute carrier family 4 (sodium bicarbonate cotransporter), member 4b [Source:ZFIN;Acc:ZDB-GENE-091030-1]
57. kcnq2a ENSDARG00000075307 7 1 - - - - - 1.000 - - - potassium voltage-gated channel, KQT-like subfamily, member 2a [Source:ZFIN;Acc:ZDB-GENE-080220-37]
58. si:ch211-171b20.3 ENSDARG00000094794 2 1 - - - - - 1.000 - - - si:ch211-171b20.3 [Source:ZFIN;Acc:ZDB-GENE-091204-278]
59. si:ch211-157c18.3 si:ch211-157c18.3 8 1 - - - - - - - 1.000 -
60. si:dkey-257e4.5 si:dkey-257e4.5 3 1 - - - - - 1.000 - - -
61. C2 C2 5 1 - - - - - - - 1.000 -
62. ENSDARG00000089152 ENSDARG00000089152 12 1 - - - - - 1.000 - - -
63. si:dkeyp-87e3.3 si:dkeyp-87e3.3 68 1 1.000 - - - - - - - -
64. opn5 ENSDARG00000070110 18 1 1.000 - - - - - - - - opsin 5 [Source:ZFIN;Acc:ZDB-GENE-041001-179]
65. asic4b ENSDARG00000004243 31 1 1.000 - - - - - - - - acid-sensing (proton-gated) ion channel family member 4b [Source:ZFIN;Acc:ZDB-GENE-040513-6]
66. scn1a 8 1 1.000 - - - - - - - - sodium channel, voltage-gated, type I, alpha, transcript variant X1
67. ch25hl2 ENSDARG00000038728 100 1 1.000 - - - - - - - - cholesterol 25-hydroxylase like 2 [Source:ZFIN;Acc:ZDB-GENE-080204-82]
68. BX649292.1 ENSDARG00000092686 1 1 - - - - - - - 1.000 -
69. vcpip1 ENSDARG00000060177 56 1 - - - - - 1.000 - - - valosin containing protein (p97)/p47 complex interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-070912-613]
70. AL935181.2 AL935181.2 9 1 1.000 - - - - - - - -
71. gabrb2 ENSDARG00000079586 33 1 1.000 - - - - - - - - gamma-aminobutyric acid (GABA) A receptor, beta 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8196]
72. trim35-30 ENSDARG00000042396, ENSDARG00000114099 2 1 - - - - - - - 1.000 - tripartite motif containing 35-30 [Source:ZFIN;Acc:ZDB-GENE-060503-557]
73. p2rx3a ENSDARG00000010477, ENSDARG00000115270 6 1 1.000 - - - - - - - - purinergic receptor P2X, ligand-gated ion channel, 3a [Source:ZFIN;Acc:ZDB-GENE-000427-3]
74. SLC16A7 ENSDARG00000098258 4 1 1.000 - - - - - - - - solute carrier family 16 member 7 [Source:HGNC Symbol;Acc:HGNC:10928]
75. 5S_rRNA_11 5S_rRNA_11 1 1 - - - - - - - 1.000 -
76. si:ch211-226f6.1 ENSDARG00000094038 1 1 - - - - - - - 1.000 - si:ch211-226f6.1 [Source:ZFIN;Acc:ZDB-GENE-070912-217]
77. si:dkey-118j18.3 si:dkey-118j18.3 4 1 - - - - - 1.000 - - -
78. heatr1 ENSDARG00000099742 92 1 - - - - - 1.000 - - - HEAT repeat containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6378]
79. BX470254.1_1 ENSDARG00000097402 50 1 1.000 - - - - - - - -
80. IGFN1_2 IGFN1_2 3 1 - - - - - - - 1.000 -
81. si:ch211-218c6.9 si:ch211-218c6.9 40 1 - - - - - 1.000 - - -
82. NMUR1 NMUR1 30 1 1.000 - - - - - - - -
83. SNORA38 SNORA38 574 1 1.000 - - - - - - - -
84. DYNC1H1 ENSDARG00000014717 11 1 - - - - - - - 1.000 - dynein, cytoplasmic 1, heavy chain 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7050]
85. slc5a2 ENSDARG00000100919 47 1 1.000 - - - - - - - - solute carrier family 5 (sodium/glucose cotransporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2498]
86. CNGB1 CNGB1 40 1 1.000 - - - - - - - -
87. rab3da ENSDARG00000018107 28 1 1.000 - - - - - - - - RAB3D, member RAS oncogene family, a [Source:ZFIN;Acc:ZDB-GENE-080722-14]
88. GRM8_1 GRM8_1 85 1 1.000 - - - - - - - -
89. si:dkeyp-87d1.6 si:dkeyp-87d1.6 0 1 - - - - - 1.000 - - -
90. cntn5 ENSDARG00000021584 30 1 1.000 - - - - - - - - contactin 5 [Source:ZFIN;Acc:ZDB-GENE-030131-5640]
91. FP017295.1 ENSDARG00000091185 22 1 1.000 - - - - - - - -
92. btbd3a ENSDARG00000005544 595 1 1.000 - - - - - - - - BTB (POZ) domain containing 3a [Source:ZFIN;Acc:ZDB-GENE-090312-7]
93. smtlb ENSDARG00000017251 7 1 - - - - - - - 1.000 - somatolactin beta [Source:ZFIN;Acc:ZDB-GENE-060123-1]
94. si:dkey-9i23.6 ENSDARG00000094678 58 1 1.000 - - - - - - - - si:dkey-9i23.6 [Source:ZFIN;Acc:ZDB-GENE-090313-365]
95. scd ENSDARG00000033662 146 1 1.000 - - - - - - - - stearoyl-CoA desaturase (delta-9-desaturase) [Source:ZFIN;Acc:ZDB-GENE-031106-3]
96. atp8b5a ENSDARG00000062040 1 1 - - - - - 1.000 - - - ATPase phospholipid transporting 8B5a [Source:ZFIN;Acc:ZDB-GENE-060531-48]
97. si:dkey-217f16.3 si:dkey-217f16.3 1 1 1.000 - - - - - - - -
98. trpm1a ENSDARG00000011259, ENSDARG00000111200, ENSDARG00000112747 48 1 1.000 - - - - - - - - transient receptor potential cation channel, subfamily M, member 1a [Source:ZFIN;Acc:ZDB-GENE-070112-1372]
99. CR318593.1_1 CR318593.1_1 8 1 1.000 - - - - - - - -
100. zgc:162879 ENSDARG00000074163 6 1 - - - - - 1.000 - - - zgc:162879 [Source:ZFIN;Acc:ZDB-GENE-070424-92]

There are 1273 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA