Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for pafah1b3

Gene Name Gene ID Reads Annotation
pafah1b3 ENSDARG00000058047, ENSDARG00000105336, ENSDARG00000116495 8019 platelet-activating factor acetylhydrolase, isoform Ib, gamma subunit [Source:ZFIN;Acc:ZDB-GENE-040426-1026]










Genes with expression patterns similar to pafah1b3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pafah1b3 ENSDARG00000058047, ENSDARG00000105336, ENSDARG00000116495 8019 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 platelet-activating factor acetylhydrolase, isoform Ib, gamma subunit [Source:ZFIN;Acc:ZDB-GENE-040426-1026]
2. sf3b1 ENSDARG00000056138 5785 3.296 - 0.979 0.770 - - - 0.785 0.762 - splicing factor 3b, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040827-3]
3. cnn3b ENSDARG00000029856 4807 2.668 - 0.980 - - - - - 0.715 0.973 calponin 3, acidic b [Source:ZFIN;Acc:ZDB-GENE-050522-263]
4. grb2b ENSDARG00000038059 9050 2.614 - 0.973 - - - 0.804 - - 0.837 growth factor receptor-bound protein 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1975]
5. cbx5 ENSDARG00000061187 24026 2.61 - 0.934 - - - 0.830 0.846 - - chromobox homolog 5 (HP1 alpha homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-5553]
6. itgb1b.1 ENSDARG00000053232 4721 2.596 - 0.904 0.890 - - - 0.802 - - integrin, beta 1b.1 [Source:ZFIN;Acc:ZDB-GENE-060803-3]
7. itgb1bp1 ENSDARG00000007169 2723 2.543 - 0.904 0.890 - - - 0.749 - - integrin beta 1 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-051113-264]
8. elavl1 11672 2.502 0.786 0.975 - - - 0.741 - - - ELAV like RNA binding protein 1, transcript variant X3
9. PELP1 ENSDARG00000079313 5771 2.488 - - 0.893 - 0.856 - 0.739 - - proline, glutamate and leucine rich protein 1 [Source:ZFIN;Acc:ZDB-GENE-140106-164]
10. ing4 ENSDARG00000030716 5908 2.456 - - - - 0.765 - - 0.733 0.958 inhibitor of growth family, member 4 [Source:ZFIN;Acc:ZDB-GENE-050522-47]
11. vps29 ENSDARG00000069521 5599 2.436 - 0.944 0.779 - - 0.713 - - - vacuolar protein sorting 29 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-8764]
12. lmnb1 ENSDARG00000044299 9817 2.428 - - - - - 0.720 0.749 - 0.959 lamin B1 [Source:ZFIN;Acc:ZDB-GENE-020424-2]
13. lmnb2 ENSDARG00000101624 11304 2.412 - 0.915 0.759 - - 0.738 - - - lamin B2 [Source:ZFIN;Acc:ZDB-GENE-990630-13]
14. col4a1 ENSDARG00000055009 3083 1.939 - 0.982 - - - - - - 0.957 collagen, type IV, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-081105-114]
15. zeb2a ENSDARG00000062338, ENSDARG00000111349, ENSDARG00000115964 6087 1.925 - 0.979 - - - - - - 0.946 zinc finger E-box binding homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-070912-553]
16. NDUFA3 ENSDARG00000041400 7939 1.902 - 0.978 - - - - - - 0.924 NADH:ubiquinone oxidoreductase subunit A3 [Source:ZFIN;Acc:ZDB-GENE-040801-18]
17. plxnb1b ENSDARG00000017211 4676 1.861 - - 0.900 - - - - - 0.961 plexin b1b [Source:ZFIN;Acc:ZDB-GENE-090812-4]
18. bambia ENSDARG00000055381 2922 1.839 - 0.966 - - - - 0.873 - - BMP and activin membrane-bound inhibitor (Xenopus laevis) homolog a [Source:ZFIN;Acc:ZDB-GENE-010416-1]
19. itgav ENSDARG00000006314 4277 1.837 - - - - - - 0.872 - 0.965 integrin, alpha V [Source:ZFIN;Acc:ZDB-GENE-060616-382]
20. rnf183 ENSDARG00000068851 2427 1.801 - 0.979 - - - - 0.822 - - ring finger protein 183 [Source:ZFIN;Acc:ZDB-GENE-060929-1090]
21. ap2b1 ENSDARG00000035152 2912 1.8 - 0.980 - - - - 0.820 - - adaptor related protein complex 2 subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6564]
22. ZNF70_11 ZNF70_11 1246 1.799 - 0.975 - - - - 0.824 - -
23. LIMD2 ENSDARG00000078092 3414 1.797 - - - - - - 0.823 - 0.974 LIM domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-120906-1]
24. s100u ENSDARG00000071014 4754 1.793 - 0.958 - - - - 0.835 - - S100 calcium binding protein U [Source:ZFIN;Acc:ZDB-GENE-030131-3121]
25. ncoa4 ENSDARG00000021439 4581 1.761 - - - - - - 0.799 - 0.962 nuclear receptor coactivator 4 [Source:ZFIN;Acc:ZDB-GENE-040426-689]
26. gsnb ENSDARG00000045262 4382 1.75 - 0.969 - - - - 0.781 - - gelsolin b [Source:ZFIN;Acc:ZDB-GENE-030131-8567]
27. clasrp ENSDARG00000061742, ENSDARG00000116329 1650 1.75 - - - - - - 0.787 - 0.963 CLK4-associating serine/arginine rich protein [Source:ZFIN;Acc:ZDB-GENE-060503-837]
28. hnrnpul1 ENSDARG00000040564 6550 1.747 - 0.991 - - - - - 0.756 - heterogeneous nuclear ribonucleoprotein U-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2432]
29. ap3d1 ENSDARG00000071424, ENSDARG00000114974 5373 1.741 - - 0.859 - - - 0.882 - - adaptor related protein complex 3 subunit delta 1 [Source:ZFIN;Acc:ZDB-GENE-050208-437]
30. cdc42l ENSDARG00000040158, ENSDARG00000116748 11671 1.735 - 0.940 - - - - 0.795 - - cell division cycle 42, like [Source:ZFIN;Acc:ZDB-GENE-030131-6069]
31. rbm8a ENSDARG00000016516 8789 1.73 - 0.886 - - - - 0.844 - - RNA binding motif protein 8A [Source:ZFIN;Acc:ZDB-GENE-050306-51]
32. COLGALT1 ENSDARG00000073974 5069 1.73 - - - - - - 0.775 - 0.955 collagen beta(1-O)galactosyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-070720-6]
33. gltscr2 gltscr2 5763 1.727 - 0.976 - - - 0.751 - - -
34. eppk1 ENSDARG00000096359 4315 1.724 - - 0.889 - - - 0.835 - - epiplakin 1 [Source:ZFIN;Acc:ZDB-GENE-030416-1]
35. arl2 ENSDARG00000069496, ENSDARG00000112191 1389 1.724 - 0.986 - - - - 0.738 - - ADP-ribosylation factor-like 2 [Source:ZFIN;Acc:ZDB-GENE-041010-19]
36. tarbp2 ENSDARG00000070471 1946 1.724 - - - - - - 0.761 - 0.963 TAR (HIV) RNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8085]
37. fras1 ENSDARG00000054619, ENSDARG00000114204 4459 1.719 - - 0.890 - - - 0.829 - - Fraser extracellular matrix complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-060526-68]
38. cd82a ENSDARG00000019098 6761 1.703 - - - - - 0.762 - - 0.941 CD82 molecule a [Source:ZFIN;Acc:ZDB-GENE-030131-2818]
39. gng5 ENSDARG00000039830 12102 1.683 - - - - - 0.789 0.894 - - guanine nucleotide binding protein (G protein), gamma 5 [Source:ZFIN;Acc:ZDB-GENE-030131-9966]
40. stag2b ENSDARG00000053668, ENSDARG00000109728 7193 1.682 - - 0.851 - - - 0.831 - - stromal antigen 2b [Source:ZFIN;Acc:ZDB-GENE-030131-2785]
41. si:dkey-193c22.2 ENSDARG00000076735 2791 1.68 - - 0.895 - - - 0.785 - - si:dkey-193c22.2 [Source:ZFIN;Acc:ZDB-GENE-070705-337]
42. gsk3aa ENSDARG00000029501 957 1.68 - - - - - - 0.718 - 0.962 glycogen synthase kinase 3 alpha a [Source:ZFIN;Acc:ZDB-GENE-060503-796]
43. ca6 ENSDARG00000056499, ENSDARG00000110050 3236 1.679 - 0.969 - - - - 0.710 - - carbonic anhydrase VI [Source:ZFIN;Acc:ZDB-GENE-030131-7091]
44. CC2D1A 1262 1.676 - - - - - - 0.714 - 0.962 coiled-coil and C2 domain containing 1A, transcript variant X2
45. papola ENSDARG00000009585 9567 1.669 - - - - - - 0.794 - 0.875 poly(A) polymerase alpha [Source:ZFIN;Acc:ZDB-GENE-030131-3507]
46. mgea5 6076 1.662 0.710 - - - - - - - 0.952 meningioma expressed antigen 5 (hyaluronidase), transcript variant X2
47. gmppb ENSDARG00000017658 3484 1.649 - - 0.874 - - - 0.775 - - GDP-mannose pyrophosphorylase B [Source:ZFIN;Acc:ZDB-GENE-040801-234]
48. tspan14 ENSDARG00000055938, ENSDARG00000117111 4518 1.649 - - 0.794 - - 0.855 - - - tetraspanin 14 [Source:ZFIN;Acc:ZDB-GENE-060825-329]
49. yth2 yth2 3716 1.645 - - 0.878 - - 0.767 - - -
50. anp32b ENSDARG00000023330 25013 1.642 - - - - - 0.806 - - 0.836 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:ZFIN;Acc:ZDB-GENE-030131-719]
51. si:dkey-253d23.10 7602 1.633 - - 0.884 - - - 0.749 - - si:dkey-253d23.10, transcript variant X4
52. TCEB3 2429 1.633 - - 0.897 - - - 0.736 - - transcription elongation factor B (SIII), polypeptide 3
53. ptbp1a ENSDARG00000019362 6290 1.627 - - - - - 0.764 0.863 - - polypyrimidine tract binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050522-492]
54. MALSU1 MALSU1 1251 1.622 - - 0.896 - - - 0.726 - -
55. abhd4 ENSDARG00000102887 748 1.619 - - 0.899 - - - 0.720 - - abhydrolase domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-050417-83]
56. daam1b ENSDARG00000009689 1520 1.615 - - 0.894 - - - 0.721 - - dishevelled associated activator of morphogenesis 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4212]
57. arcn1b ENSDARG00000031214 4529 1.615 - - 0.893 - - - 0.722 - - archain 1b [Source:ZFIN;Acc:ZDB-GENE-040121-7]
58. spcs2 ENSDARG00000042823 10032 1.614 - - - - - 0.774 0.840 - - signal peptidase complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-050320-32]
59. lsm14aa ENSDARG00000006600 2298 1.613 - - 0.891 - - - 0.722 - - LSM14A mRNA processing body assembly factor a [Source:ZFIN;Acc:ZDB-GENE-040426-1567]
60. celsr1b ENSDARG00000058259 1219 1.611 - - 0.893 - - 0.718 - - - cadherin EGF LAG seven-pass G-type receptor 1b [Source:ZFIN;Acc:ZDB-GENE-050823-4]
61. sepw1 17630 1.605 - - 0.784 - - - 0.821 - - selenoprotein W, 1
62. TRIM35_10 TRIM35_10 484 1.605 - - 0.894 - - - 0.711 - -
63. mapre1b ENSDARG00000002659 9119 1.602 - - 0.866 - - - - 0.736 - microtubule-associated protein, RP/EB family, member 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2256]
64. CR954963.1 ENSDARG00000097153 1135 1.597 - - 0.897 - - - 0.700 - -
65. dnmbp ENSDARG00000074121 2711 1.595 - - - - - 0.729 0.866 - - dynamin binding protein [Source:ZFIN;Acc:ZDB-GENE-101026-2]
66. ogt.1 ENSDARG00000099455, ENSDARG00000105243 3274 1.595 - - - - - 0.724 0.871 - - O-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9631]
67. ctnna1 ENSDARG00000102441 7984 1.592 - - - - - 0.718 0.874 - - catenin (cadherin-associated protein), alpha 1 [Source:ZFIN;Acc:ZDB-GENE-991207-24]
68. foxo3b ENSDARG00000042904 5046 1.592 - - 0.891 - - 0.701 - - - forkhead box O3b [Source:ZFIN;Acc:ZDB-GENE-990708-6]
69. syap1 ENSDARG00000012946 3560 1.591 - - - - - 0.792 0.799 - - synapse associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-917]
70. fzd7a ENSDARG00000060004, ENSDARG00000115544 4171 1.57 - - - - - 0.811 0.759 - - frizzled class receptor 7a [Source:ZFIN;Acc:ZDB-GENE-990415-223]
71. ywhabl ENSDARG00000040287 39045 1.57 - - - - - - 0.840 - 0.730 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide like [Source:ZFIN;Acc:ZDB-GENE-030131-448]
72. nedd8 ENSDARG00000007989 3896 1.562 - - 0.790 - - - 0.772 - - neural precursor cell expressed, developmentally down-regulated 8 [Source:ZFIN;Acc:ZDB-GENE-030616-588]
73. atp2b4 5891 1.554 - - - - - 0.768 0.786 - - ATPase, Ca++ transporting, plasma membrane 4
74. ptbp3 ENSDARG00000043757 6760 1.554 - - - - - 0.732 0.822 - - polypyrimidine tract binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-091116-1]
75. tax1bp1b ENSDARG00000056856 4526 1.553 - - - - - 0.738 0.815 - - Tax1 (human T-cell leukemia virus type I) binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2872]
76. caprin1b ENSDARG00000054272 7033 1.535 - - - - - 0.814 0.721 - - cell cycle associated protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2020]
77. nsd1a ENSDARG00000060016 2974 1.534 - - - - - 0.754 0.780 - - nuclear receptor binding SET domain protein 1a [Source:ZFIN;Acc:ZDB-GENE-080519-3]
78. cited4a ENSDARG00000035990 2762 1.527 - - - - - 0.795 0.732 - - Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4a [Source:ZFIN;Acc:ZDB-GENE-030131-7661]
79. ammecr1 ENSDARG00000012892 14475 1.524 - 0.800 - - - 0.724 - - - Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 homolog (human) [Source:ZFIN;Acc:ZDB-GENE-040426-1533]
80. bag6 ENSDARG00000075892 3782 1.523 - - - - - 0.724 0.799 - - BCL2 associated athanogene 6 [Source:ZFIN;Acc:ZDB-GENE-010501-5]
81. Mar-02 Mar-02 1812 1.52 - - - - - 0.702 0.818 - -
82. ptges3b ENSDARG00000089626 5666 1.514 - - - 0.775 - - 0.739 - - prostaglandin E synthase 3b (cytosolic) [Source:ZFIN;Acc:ZDB-GENE-040625-144]
83. xpo1a ENSDARG00000078041 3544 1.512 - - - - - 0.719 0.793 - - exportin 1 (CRM1 homolog, yeast) a [Source:ZFIN;Acc:ZDB-GENE-050309-201]
84. TMEM179 ENSDARG00000013292 3452 1.509 - 0.742 - - - - 0.767 - - transmembrane protein 179 [Source:ZFIN;Acc:ZDB-GENE-040808-25]
85. h3f3b.1 ENSDARG00000020504, ENSDARG00000068434, ENSDARG00000068436 50840 1.506 - - 0.779 - - - 0.727 - - H3 histone, family 3B.1 [Source:ZFIN;Acc:ZDB-GENE-050417-65]
86. zfhx4 ENSDARG00000075542 6927 1.504 - - - - - 0.736 0.768 - - zinc finger homeobox 4 [Source:ZFIN;Acc:ZDB-GENE-070530-3]
87. nrip1b ENSDARG00000068894 2699 1.493 - 0.753 - - - - 0.740 - - nuclear receptor interacting protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4173]
88. gna11b ENSDARG00000053326 5118 1.488 - - - - - 0.724 0.764 - - guanine nucleotide binding protein (G protein), alpha 11b (Gq class) [Source:ZFIN;Acc:ZDB-GENE-041121-9]
89. dap1b ENSDARG00000086842, ENSDARG00000109678 2464 1.486 - - - - - 0.706 0.780 - - death associated protein 1b [Source:ZFIN;Acc:ZDB-GENE-000511-4]
90. supt5h ENSDARG00000042724, ENSDARG00000111598 6419 1.472 - - - - - 0.733 0.739 - - SPT5 homolog, DSIF elongation factor subunit [Source:ZFIN;Acc:ZDB-GENE-001207-1]
91. ccnl1a ENSDARG00000055124, ENSDARG00000116311 2174 1.472 - - - - - 0.709 0.763 - - cyclin L1a [Source:ZFIN;Acc:ZDB-GENE-050419-206]
92. exosc1 ENSDARG00000059841 6895 1.47 - - - - - 0.728 0.742 - - exosome component 1 [Source:ZFIN;Acc:ZDB-GENE-080926-3]
93. kif5ba ENSDARG00000074131, ENSDARG00000103394 5232 1.469 - - 0.724 - - 0.745 - - - kinesin family member 5B, a [Source:ZFIN;Acc:ZDB-GENE-070629-2]
94. CABZ01092303.1 CABZ01092303.1 8825 1.46 - - - - - 0.718 0.742 - -
95. eif3s10 ENSDARG00000076815 10822 1.459 - - 0.753 - - 0.706 - - - eukaryotic translation initiation factor 3, subunit 10 (theta) [Source:ZFIN;Acc:ZDB-GENE-030131-5726]
96. ube2g1b ENSDARG00000069527 5376 1.459 - - - - - 0.745 0.714 - - ubiquitin-conjugating enzyme E2G 1b (UBC7 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-2939]
97. FOXK2 ENSDARG00000030583 5500 1.456 - - - - - 0.704 0.752 - - forkhead box K2 [Source:ZFIN;Acc:ZDB-GENE-030131-2861]
98. tsc22d1 ENSDARG00000038306 2413 1.451 - - - - - 0.742 0.709 - - TSC22 domain family, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7785]
99. ppp1cbl ENSDARG00000102012 2301 1.449 - - - - - 0.722 0.727 - - protein phosphatase 1, catalytic subunit, beta isoform, like [Source:ZFIN;Acc:ZDB-GENE-030131-6529]
100. pdap1a ENSDARG00000092546, ENSDARG00000116115 7617 1.448 - - - - - - 0.746 0.702 - pdgfa associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1693]

There are 1338 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA