Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for pafah1b2

Gene Name Gene ID Reads Annotation
pafah1b2 ENSDARG00000035352, ENSDARG00000114404 664 platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 [Source:ZFIN;Acc:ZDB-GENE-060526-43]










Genes with expression patterns similar to pafah1b2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pafah1b2 ENSDARG00000035352, ENSDARG00000114404 664 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 [Source:ZFIN;Acc:ZDB-GENE-060526-43]
2. gng3 ENSDARG00000009553 2530 3.305 - - - - 0.918 0.797 0.795 0.795 - guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]
3. gad2 ENSDARG00000015537 724 2.563 - - - 0.854 0.965 - 0.744 - - glutamate decarboxylase 2 [Source:ZFIN;Acc:ZDB-GENE-030909-9]
4. slc18a3a ENSDARG00000006356 1285 2.448 - - - - 0.900 0.747 0.801 - - solute carrier family 18 (vesicular acetylcholine transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-060929-990]
5. her2 ENSDARG00000038205 3219 2.388 - - - - 0.766 0.870 0.752 - - hairy-related 2 [Source:ZFIN;Acc:ZDB-GENE-980526-274]
6. PPP1R9B PPP1R9B 855 2.373 0.716 - - - - 0.843 0.814 - -
7. cspg5a ENSDARG00000069981 1699 2.368 - - 0.756 - - 0.778 0.834 - - chondroitin sulfate proteoglycan 5a [Source:ZFIN;Acc:ZDB-GENE-080425-4]
8. scn2b ENSDARG00000101713 796 2.356 - - - - - 0.820 0.810 0.726 - sodium channel, voltage-gated, type II, beta [Source:ZFIN;Acc:ZDB-GENE-070920-1]
9. tmtc2 tmtc2 798 2.355 - - - - 0.943 0.709 0.703 - -
10. her4.1 ENSDARG00000056732 1264 2.35 - 0.824 - - - 0.743 0.783 - - hairy-related 4, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-980526-521]
11. nup93 ENSDARG00000003487, ENSDARG00000111433 2474 2.218 - - - 0.797 0.713 - 0.708 - - nucleoporin 93 [Source:ZFIN;Acc:ZDB-GENE-990415-46]
12. GADD45G_1 GADD45G_1 236 1.798 - - - - - 0.883 0.915 - -
13. si:ch211-181p13.2 ENSDARG00000096484 94 1.784 - - - - 0.979 0.805 - - - si:ch211-181p13.2 [Source:ZFIN;Acc:ZDB-GENE-030131-9054]
14. hoxb5b ENSDARG00000054030, ENSDARG00000113174 808 1.784 - - - - 0.908 0.876 - - - homeobox B5b [Source:ZFIN;Acc:ZDB-GENE-000823-6]
15. dync1i1 ENSDARG00000060948 554 1.78 - - - - - 0.870 0.910 - - dynein, cytoplasmic 1, intermediate chain 1 [Source:ZFIN;Acc:ZDB-GENE-061215-62]
16. dbx1b ENSDARG00000001859, ENSDARG00000113468 810 1.766 - - - - 0.971 0.795 - - - developing brain homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-000128-11]
17. lhx1b ENSDARG00000007944, ENSDARG00000111635 254 1.766 - - - - - 0.876 0.890 - - LIM homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-980526-116]
18. ATP6AP1L ATP6AP1L 164 1.761 - - - - - 0.869 0.892 - -
19. nhlh2 ENSDARG00000025495 1860 1.758 - - - - - 0.911 0.847 - - nescient helix loop helix 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1809]
20. her15.1 ENSDARG00000054560, ENSDARG00000054562 1500 1.758 - - - - - 0.886 0.872 - - hairy and enhancer of split-related 15, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030707-2]
21. ATP6AP1L_1 ATP6AP1L_1 508 1.75 - 0.925 - - - 0.825 - - -
22. atpv0e2 ENSDARG00000059057 585 1.749 - - - 0.891 - - 0.858 - - ATPase H+ transporting V0 subunit e2 [Source:ZFIN;Acc:ZDB-GENE-050522-135]
23. SLITRK4 ENSDARG00000079781 54 1.746 - - - - - 0.833 0.913 - - SLIT and NTRK-like family, member 4 [Source:ZFIN;Acc:ZDB-GENE-140303-1]
24. GABRG1 ENSDARG00000101995 201 1.74 - - - - - 0.864 0.876 - - gamma-aminobutyric acid type A receptor gamma1 subunit [Source:ZFIN;Acc:ZDB-GENE-141215-66]
25. map6 map6 70 1.738 - - - - - 0.861 0.877 - -
26. nrn1a ENSDARG00000071860 1311 1.737 - - - - 0.954 - 0.783 - - neuritin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-212]
27. st8sia2 ENSDARG00000018788 2183 1.735 - - - - 0.849 - 0.886 - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-020919-4]
28. sult4a1 ENSDARG00000101967 205 1.733 - - - - - 0.852 0.881 - - sulfotransferase family 4A, member 1 [Source:ZFIN;Acc:ZDB-GENE-060421-2705]
29. TUSC3 ENSDARG00000078854 1021 1.731 - - - - - 0.900 0.831 - - tumor suppressor candidate 3 [Source:ZFIN;Acc:ZDB-GENE-050522-381]
30. calca ENSDARG00000056590 150 1.731 - - - - - 0.910 0.821 - - calcitonin/calcitonin-related polypeptide, alpha [Source:ZFIN;Acc:ZDB-GENE-040718-173]
31. MTBP ENSDARG00000090447 174 1.729 - - - - 0.978 - 0.751 - - MDM2 binding protein [Source:ZFIN;Acc:ZDB-GENE-120724-1]
32. tmem240 tmem240 180 1.725 - - - - - 0.890 0.835 - -
33. kif5c ENSDARG00000076027 424 1.725 - - - - - 0.824 0.901 - - kinesin family member 5C [Source:ZFIN;Acc:ZDB-GENE-081105-14]
34. WNK2 ENSDARG00000104989 429 1.721 - - - - - 0.916 0.805 - - WNK lysine deficient protein kinase 2 [Source:ZFIN;Acc:ZDB-GENE-160114-3]
35. FUT9 FUT9 91 1.72 - - - - - 0.807 0.913 - -
36. fbxo41 ENSDARG00000078908 95 1.714 - - - - - 0.886 0.828 - - F-box protein 41 [Source:ZFIN;Acc:ZDB-GENE-090313-350]
37. lgi2a ENSDARG00000111069 965 1.712 - - - - 0.958 0.754 - - - leucine-rich repeat LGI family, member 2a [Source:ZFIN;Acc:ZDB-GENE-060217-2]
38. CDH12 CDH12 44 1.711 - - - - - 0.798 0.913 - -
39. prdm13 ENSDARG00000078701 205 1.71 - - - - - 0.798 0.912 - - PR domain containing 13 [Source:ZFIN;Acc:ZDB-GENE-080616-1]
40. mycla ENSDARG00000006003 1866 1.705 - - - - 0.968 - 0.737 - - MYCL proto-oncogene, bHLH transcription factor a [Source:ZFIN;Acc:ZDB-GENE-040426-2439]
41. si:ch211-278j3.3 ENSDARG00000020284 478 1.699 - - - - 0.968 - 0.731 - - si:ch211-278j3.3 [Source:ZFIN;Acc:ZDB-GENE-041014-147]
42. ccdc59 ENSDARG00000045755 297 1.695 - 0.725 - - 0.970 - - - - coiled-coil domain containing 59 [Source:ZFIN;Acc:ZDB-GENE-041210-91]
43. cacng3b ENSDARG00000076401 91 1.695 - - - - - 0.881 0.814 - - calcium channel, voltage-dependent, gamma subunit 3b [Source:ZFIN;Acc:ZDB-GENE-090828-1]
44. zgc:194665 ENSDARG00000004577 136 1.694 - - - - - 0.800 0.894 - - zgc:194665 [Source:ZFIN;Acc:ZDB-GENE-080722-38]
45. AL935029.1 AL935029.1 514 1.69 - - - - - 0.828 0.862 - -
46. her8.2 ENSDARG00000069675 315 1.69 - - - - - 0.775 0.915 - - hairy-related 8.2 [Source:ZFIN;Acc:ZDB-GENE-060815-4]
47. nadl1.1 1200 1.688 - - - - - 0.837 0.851 - - neural adhesion molecule L1.1, transcript variant X1
48. tmem35 ENSDARG00000052567 5685 1.686 - - - - - 0.867 0.819 - - transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
49. CAMSAP3 ENSDARG00000059475 263 1.684 - - - - - 0.904 0.780 - - calmodulin regulated spectrin-associated protein family, member 3 [Source:ZFIN;Acc:ZDB-GENE-060503-811]
50. fhdc1 ENSDARG00000074812 934 1.683 - - - 0.724 0.959 - - - - FH2 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040826-4]
51. evlb ENSDARG00000099720 245 1.674 - - - - - 0.857 0.817 - - Enah/Vasp-like b [Source:ZFIN;Acc:ZDB-GENE-040426-1804]
52. polr3glb ENSDARG00000013734 1199 1.672 - - - 0.888 - 0.784 - - - polymerase (RNA) III (DNA directed) polypeptide G like b [Source:ZFIN;Acc:ZDB-GENE-041010-32]
53. jph3 ENSDARG00000102204 175 1.67 - - - - - 0.835 0.835 - - junctophilin 3 [Source:ZFIN;Acc:ZDB-GENE-060503-415]
54. nlgn2b ENSDARG00000079251, ENSDARG00000111576 179 1.667 - - - - - 0.760 0.907 - - neuroligin 2b [Source:ZFIN;Acc:ZDB-GENE-090918-3]
55. her4.3 ENSDARG00000070770 613 1.665 - - - - - 0.796 0.869 - - hairy-related 4, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-081030-7]
56. trim36 ENSDARG00000062794 785 1.663 - - - - - 0.837 0.826 - - tripartite motif containing 36 [Source:ZFIN;Acc:ZDB-GENE-040426-2936]
57. DTX4 ENSDARG00000076302 2642 1.663 - - - - 0.843 - 0.820 - - deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
58. her4.2_1 ENSDARG00000056729, ENSDARG00000094426 2383 1.662 0.738 - - - - - 0.924 - - hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
59. nes ENSDARG00000088805 2710 1.661 - - - - - 0.808 0.853 - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
60. elavl3 ENSDARG00000014420 8644 1.657 - - - - - 0.852 0.805 - - ELAV like neuron-specific RNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-980526-76]
61. pou3f2b ENSDARG00000076262, ENSDARG00000112713 2439 1.655 - - - - - 0.843 0.812 - - POU class 3 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-370]
62. usp49 ENSDARG00000000229 706 1.654 - - - - 0.951 0.703 - - - ubiquitin specific peptidase 49 [Source:ZFIN;Acc:ZDB-GENE-050208-484]
63. Mar-09 Mar-09 126 1.653 - - - - - 0.850 0.803 - -
64. myo16 ENSDARG00000078582 714 1.651 - - - - - 0.925 0.726 - - myosin XVI [Source:ZFIN;Acc:ZDB-GENE-070912-470]
65. celf4 ENSDARG00000070045 1537 1.651 - - - - - 0.837 0.814 - - CUGBP, Elav-like family member 4 [Source:ZFIN;Acc:ZDB-GENE-040718-300]
66. cuedc1a ENSDARG00000068716 232 1.645 - - - - - 0.784 0.861 - - CUE domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-061027-344]
67. pou3f3a ENSDARG00000042032 2835 1.645 - - - - - 0.835 0.810 - - POU class 3 homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-980526-220]
68. slc12a5b ENSDARG00000078187 329 1.645 - - - - - 0.798 0.847 - - solute carrier family 12 (potassium/chloride transporter), member 5b [Source:ZFIN;Acc:ZDB-GENE-080707-1]
69. RNF208 ENSDARG00000078056 60 1.643 - - - - - 0.745 0.898 - - ring finger protein 208 [Source:HGNC Symbol;Acc:HGNC:25420]
70. gcc1 ENSDARG00000045541 1821 1.643 - 0.884 - - - - - 0.759 - GRIP and coiled-coil domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040801-118]
71. C8H1orf106 C8H1orf106 2690 1.642 - - - - - 0.897 0.745 - -
72. kif26aa ENSDARG00000042368 674 1.64 - - - - - 0.784 0.856 - - kinesin family member 26Aa [Source:ZFIN;Acc:ZDB-GENE-041001-148]
73. SLITRK5 SLITRK5 122 1.638 - - - - - 0.810 0.828 - -
74. vgf ENSDARG00000105529 247 1.637 - - - - - 0.856 0.781 - - VGF nerve growth factor inducible [Source:ZFIN;Acc:ZDB-GENE-121009-2]
75. tbkbp1 ENSDARG00000061473 24 1.635 - - - - - 0.783 0.852 - - TBK1 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-100203-1]
76. neflb ENSDARG00000012426 298 1.635 - - - - - 0.809 0.826 - - neurofilament, light polypeptide b [Source:ZFIN;Acc:ZDB-GENE-060312-44]
77. si:dkey-28b4.8 ENSDARG00000002840 1277 1.635 - - - - 0.919 0.716 - - - si:dkey-28b4.8 [Source:ZFIN;Acc:ZDB-GENE-090501-2]
78. CR848045.1 CR848045.1 459 1.634 - - - - - 0.855 0.779 - -
79. wu:fq41a10 wu:fq41a10 7009 1.631 - - - - 0.888 - 0.743 - -
80. her15.2 her15.2 1701 1.629 - - - - 0.765 - 0.864 - -
81. dbx2 2971 1.627 - - - - - 0.868 0.759 - - developing brain homeobox 2
82. neurog1 ENSDARG00000056130 3924 1.625 - - - - - 0.844 0.781 - - neurogenin 1 [Source:ZFIN;Acc:ZDB-GENE-990415-174]
83. syt12 ENSDARG00000101776 215 1.624 - - - - - 0.907 0.717 - - synaptotagmin XII [Source:ZFIN;Acc:ZDB-GENE-081022-147]
84. ctnnd2b ENSDARG00000003779 964 1.623 - - - - - 0.813 0.810 - - catenin (cadherin-associated protein), delta 2b [Source:ZFIN;Acc:ZDB-GENE-070912-532]
85. cadpsb ENSDARG00000070567 458 1.622 - - - - - 0.792 0.830 - - Ca2+-dependent activator protein for secretion b [Source:ZFIN;Acc:ZDB-GENE-110621-2]
86. diras1a ENSDARG00000028066 126 1.621 - - - - - 0.702 0.919 - - DIRAS family, GTP-binding RAS-like 1a [Source:ZFIN;Acc:ZDB-GENE-030131-5788]
87. pbx3a ENSDARG00000089262 97 1.617 - - - - - 0.812 0.805 - - pre-B-cell leukemia homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-031218-1]
88. s1pr1 ENSDARG00000042690, ENSDARG00000113842, ENSDARG00000116038 2510 1.616 - - - - - 0.852 0.764 - - sphingosine-1-phosphate receptor 1 [Source:ZFIN;Acc:ZDB-GENE-001228-2]
89. CRIP2 ENSDARG00000070670 323 1.615 - - - - - 0.807 0.808 - - cysteine-rich protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2889]
90. SPOCK1 ENSDARG00000074644 794 1.614 - - - - - 0.805 0.809 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:ZFIN;Acc:ZDB-GENE-110428-1]
91. scn1bb ENSDARG00000105003 239 1.614 - - - - - 0.875 0.739 - - sodium channel, voltage-gated, type I, beta b [Source:ZFIN;Acc:ZDB-GENE-090408-1]
92. cpsf5 cpsf5 1841 1.613 - - - - 0.903 - 0.710 - -
93. knop1 ENSDARG00000077721 2198 1.613 - - - - 0.843 - - 0.770 - lysine-rich nucleolar protein 1 [Source:ZFIN;Acc:ZDB-GENE-090313-76]
94. tmie ENSDARG00000069423 305 1.613 - - - - - 0.912 0.701 - - transmembrane inner ear [Source:ZFIN;Acc:ZDB-GENE-061207-9]
95. ptf1a ENSDARG00000014479 349 1.611 - - - - - 0.759 0.852 - - pancreas associated transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030616-579]
96. csdc2a ENSDARG00000041323, ENSDARG00000115932 490 1.607 - - - - - 0.865 0.742 - - cold shock domain containing C2, RNA binding a [Source:ZFIN;Acc:ZDB-GENE-040718-442]
97. arnt2 ENSDARG00000103697 5731 1.606 - - - - - 0.809 0.797 - - aryl-hydrocarbon receptor nuclear translocator 2 [Source:ZFIN;Acc:ZDB-GENE-001207-3]
98. celf3a ENSDARG00000034668 2432 1.606 - - - - 0.873 0.733 - - - cugbp, Elav-like family member 3a [Source:ZFIN;Acc:ZDB-GENE-000501-2]
99. rhbdl3 ENSDARG00000105190, ENSDARG00000112687, ENSDARG00000116222 977 1.606 - - - - - 0.712 0.894 - - rhomboid, veinlet-like 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050417-2]
100. nlgn3a ENSDARG00000104786 91 1.605 - - - - - 0.726 0.879 - - neuroligin 3a [Source:ZFIN;Acc:ZDB-GENE-071219-1]

There are 1745 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA