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Results for paf1

Gene Name Gene ID Reads Annotation
paf1 ENSDARG00000098432 1806 PAF1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-050506-101]










Genes with expression patterns similar to paf1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. paf1 ENSDARG00000098432 1806 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 PAF1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-050506-101]
2. ddx27 ENSDARG00000091831 1471 2.565 - - - - 0.941 0.737 - - 0.887 DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Source:ZFIN;Acc:ZDB-GENE-031001-8]
3. polr3a ENSDARG00000102569 1072 2.56 - - - - - 0.922 0.774 - 0.864 polymerase (RNA) III (DNA directed) polypeptide A [Source:ZFIN;Acc:ZDB-GENE-050208-103]
4. ube2g1b ENSDARG00000069527 5376 2.418 - 0.797 - - - - 0.809 - 0.812 ubiquitin-conjugating enzyme E2G 1b (UBC7 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-2939]
5. imp4 ENSDARG00000054540 1396 2.364 - 0.743 - - - - 0.734 - 0.887 IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-474]
6. sult6b1 ENSDARG00000086826 2070 2.323 - - - - 0.890 - 0.712 - 0.721 sulfotransferase family, cytosolic, 6b, member 1 [Source:ZFIN;Acc:ZDB-GENE-050417-228]
7. aar2 ENSDARG00000018658 297 1.855 - - - - 0.951 0.904 - - - AAR2 splicing factor homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040704-68]
8. stub1 ENSDARG00000045228 105 1.854 - - - - 0.960 0.894 - - - STIP1 homology and U-Box containing protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2963]
9. alg10 ENSDARG00000053917 491 1.82 - - - - 0.962 - 0.858 - - asparagine-linked glycosylation 10 [Source:ZFIN;Acc:ZDB-GENE-110310-8]
10. si:busm1-105l16.2 ENSDARG00000070858, ENSDARG00000114184 199 1.81 - - - - 0.958 0.852 - - - si:busm1-105l16.2 [Source:ZFIN;Acc:ZDB-GENE-030616-108]
11. mlec ENSDARG00000059630 2057 1.8 - - - - 0.892 - 0.908 - - malectin [Source:ZFIN;Acc:ZDB-GENE-081105-187]
12. FOXK2 ENSDARG00000030583 5500 1.789 - - - - - - 0.909 - 0.880 forkhead box K2 [Source:ZFIN;Acc:ZDB-GENE-030131-2861]
13. C17H15orf41 C17H15orf41 313 1.785 - - - - 0.905 0.880 - - -
14. cxxc1 cxxc1 914 1.782 - - - - 0.947 - 0.835 - -
15. sugp1 ENSDARG00000075936 826 1.775 - - - - 0.957 0.818 - - - SURP and G patch domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-070615-33]
16. nfs1 ENSDARG00000062237 2741 1.77 - - - - 0.924 - - - 0.846 NFS1 cysteine desulfurase [Source:ZFIN;Acc:ZDB-GENE-060405-1]
17. utp18 ENSDARG00000102618 1983 1.76 - - - - 0.842 0.918 - - - UTP18 small subunit (SSU) processome component [Source:ZFIN;Acc:ZDB-GENE-060929-668]
18. GTSE1 ENSDARG00000013719 1115 1.758 - - - - 0.936 0.822 - - - G-2 and S-phase expressed 1 [Source:ZFIN;Acc:ZDB-GENE-050522-493]
19. ppp4cb ENSDARG00000076439 1693 1.755 - - - - 0.925 - - - 0.830 protein phosphatase 4, catalytic subunit b [Source:ZFIN;Acc:ZDB-GENE-080219-32]
20. PPP1R8 PPP1R8 1897 1.749 - 0.852 - - 0.897 - - - -
21. ehmt1b ENSDARG00000026634, ENSDARG00000116921 1261 1.74 - - - - 0.922 0.818 - - - euchromatic histone-lysine N-methyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-080515-3]
22. sipa1l1 ENSDARG00000020134 565 1.737 - - - - - 0.873 - - 0.864 signal-induced proliferation-associated 1 like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9909]
23. tfap4 ENSDARG00000103923 2203 1.728 - - - - 0.924 - - - 0.804 transcription factor AP-4 (activating enhancer binding protein 4) [Source:ZFIN;Acc:ZDB-GENE-090810-1]
24. mdm2 ENSDARG00000033443, ENSDARG00000115677 2480 1.719 - - - - 0.895 - - - 0.824 MDM2 oncogene, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-990415-153]
25. CU570681.1 CU570681.1 512 1.718 - - - - 0.936 0.782 - - -
26. zgc:114130 ENSDARG00000040725, ENSDARG00000116854 806 1.715 - - - - 0.959 - - 0.756 - zgc:114130 [Source:ZFIN;Acc:ZDB-GENE-050913-48]
27. xpnpep1 ENSDARG00000029011 1723 1.71 - - - - - 0.876 - - 0.834 X-prolyl aminopeptidase (aminopeptidase P) 1, soluble [Source:ZFIN;Acc:ZDB-GENE-040426-999]
28. TSG101 TSG101 1686 1.707 - - - - 0.914 0.793 - - -
29. wbscr16 wbscr16 791 1.7 - - - - 0.937 0.763 - - -
30. si:dkey-22o12.7 si:dkey-22o12.7 1812 1.699 - - - - 0.932 - 0.767 - -
31. ndfip2 ENSDARG00000033928 3129 1.698 - - - - - - 0.888 - 0.810 Nedd4 family interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2662]
32. CRP CRP 136 1.694 - - - - 0.950 - 0.744 - -
33. MON1B_1 MON1B_1 697 1.692 - - - - 0.951 - 0.741 - -
34. egfl6 ENSDARG00000045958 335 1.691 - - - - - 0.871 0.820 - - EGF-like-domain, multiple 6 [Source:ZFIN;Acc:ZDB-GENE-040718-157]
35. ralgps2 ENSDARG00000026519 1610 1.69 - - - - - - 0.819 - 0.871 Ral GEF with PH domain and SH3 binding motif 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1212]
36. prpf6 ENSDARG00000091367 1868 1.686 - - - - - - - 0.786 0.900 PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-2575]
37. zgc:65772 zgc:65772 2092 1.683 - - - - 0.796 - - - 0.887
38. LPHN2 LPHN2 1971 1.682 - - - - 0.816 0.866 - - -
39. pak2b ENSDARG00000018476 4331 1.681 - 0.735 - - 0.946 - - - - p21 protein (Cdc42/Rac)-activated kinase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-3759]
40. C2H14orf119 C2H14orf119 716 1.681 - - - - 0.942 - - 0.739 -
41. timeless ENSDARG00000078497 1114 1.679 - - - - - 0.810 - - 0.869 timeless circadian clock [Source:ZFIN;Acc:ZDB-GENE-030131-8978]
42. get4 ENSDARG00000024398 1818 1.679 - - - - 0.913 0.766 - - - golgi to ER traffic protein 4 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5399]
43. ercc8 ENSDARG00000069283, ENSDARG00000116263 546 1.677 - - - - - 0.787 0.890 - - excision repair cross-complementation group 8 [Source:ZFIN;Acc:ZDB-GENE-041010-60]
44. prkrira 971 1.673 - - - - - 0.773 - - 0.900 protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor) a
45. tradd ENSDARG00000036057, ENSDARG00000117083 1583 1.672 - - - - - 0.813 - - 0.859 tnfrsf1a-associated via death domain [Source:ZFIN;Acc:ZDB-GENE-000511-5]
46. zgc:171971 ENSDARG00000042054 388 1.669 0.736 - - - - - 0.933 - - zgc:171971 [Source:ZFIN;Acc:ZDB-GENE-070928-37]
47. lamb1b ENSDARG00000045524, ENSDARG00000116025 613 1.667 - - - - - - 0.878 - 0.789 laminin, beta 1b [Source:ZFIN;Acc:ZDB-GENE-041210-197]
48. faf2 ENSDARG00000052374 1351 1.666 - - - - 0.851 - - - 0.815 Fas associated factor family member 2 [Source:ZFIN;Acc:ZDB-GENE-050208-312]
49. PLEKHG1 2100 1.665 - - - 0.790 0.875 - - - - pleckstrin homology and RhoGEF domain containing G1, transcript variant X2
50. abcf2a ENSDARG00000038785 2065 1.661 - - - - 0.886 - - 0.775 - ATP-binding cassette, sub-family F (GCN20), member 2a [Source:ZFIN;Acc:ZDB-GENE-030131-8714]
51. ttll4 ENSDARG00000078935 1663 1.66 - - - - 0.944 0.716 - - - tubulin tyrosine ligase-like family, member 4 [Source:ZFIN;Acc:ZDB-GENE-070912-313]
52. fmnl3 ENSDARG00000004372 821 1.659 0.719 - - - 0.940 - - - - formin-like 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1571]
53. prelid1a ENSDARG00000098671 4745 1.658 - - - - 0.922 - 0.736 - - PRELI domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1341]
54. wdr46_1 ENSDARG00000095879 1291 1.658 - - - 0.774 - 0.884 - - - WD repeat domain 46 [Source:ZFIN;Acc:ZDB-GENE-040426-1264]
55. PRC1 PRC1 583 1.654 - - - - 0.952 - - 0.702 -
56. cbx4 ENSDARG00000099441 372 1.652 - - - - 0.938 - 0.714 - - chromobox homolog 4 (Pc class homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040329-2]
57. krcp ENSDARG00000040224 5961 1.649 - - - 0.798 - 0.851 - - - kelch repeat-containing protein [Source:ZFIN;Acc:ZDB-GENE-030131-2126]
58. TUBGCP6 1991 1.645 - - - - 0.909 0.736 - - - tubulin, gamma complex associated protein 6
59. rnf20 ENSDARG00000016664 3641 1.643 - 0.811 - - - - - - 0.832 ring finger protein 20, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-130404-2]
60. C24H11orf54 C24H11orf54 719 1.64 - - - - 0.916 0.724 - - -
61. si:dkey-253d23.10 7602 1.639 - - - - - 0.777 0.862 - - si:dkey-253d23.10, transcript variant X4
62. brd8 ENSDARG00000025071 2605 1.637 - - - 0.760 - - - - 0.877 bromodomain containing 8 [Source:ZFIN;Acc:ZDB-GENE-030722-10]
63. EPT1 EPT1 1912 1.637 - - - - - - 0.824 - 0.813
64. atxn2l ENSDARG00000011597, ENSDARG00000112336 2104 1.635 - - - - - - 0.806 - 0.829 ataxin 2-like [Source:ZFIN;Acc:ZDB-GENE-030131-3246]
65. zfand3 ENSDARG00000052833 2682 1.635 - - - - 0.856 - - 0.779 - zinc finger, AN1-type domain 3 [Source:ZFIN;Acc:ZDB-GENE-050706-134]
66. rae1 ENSDARG00000007196, ENSDARG00000113905 3321 1.633 - - - - 0.820 - - - 0.813 ribonucleic acid export 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1029]
67. ints2 ENSDARG00000069085, ENSDARG00000101876 1249 1.632 - - - - - - - 0.830 0.802 integrator complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-050522-148]
68. nelfb ENSDARG00000035505 1337 1.632 - - - - 0.882 - - 0.750 - negative elongation factor complex member B [Source:ZFIN;Acc:ZDB-GENE-040426-765]
69. tmprss13a ENSDARG00000100969 84 1.631 - - - - - 0.859 0.772 - - transmembrane serine protease 13a [Source:ZFIN;Acc:ZDB-GENE-090309-3]
70. tp53rk ENSDARG00000112667 806 1.628 - - - - 0.917 - 0.711 - - TP53 regulating kinase [Source:ZFIN;Acc:ZDB-GENE-050522-123]
71. skia ENSDARG00000042151 1850 1.625 - - - - 0.894 - 0.731 - - v-ski avian sarcoma viral oncogene homolog a [Source:ZFIN;Acc:ZDB-GENE-990715-9]
72. LMAN2L LMAN2L 555 1.624 0.703 - - - 0.921 - - - -
73. snx27a ENSDARG00000033804 2249 1.624 - - - - 0.862 - - - 0.762 sorting nexin family member 27a [Source:ZFIN;Acc:ZDB-GENE-060503-371]
74. gpsm2 ENSDARG00000017311, ENSDARG00000113810 1001 1.623 - - - - - - 0.751 - 0.872 G protein signaling modulator 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1169]
75. Sep-12 Sep-12 1828 1.623 - - - - - 0.775 - - 0.848
76. slc29a2 ENSDARG00000001767, ENSDARG00000115816 439 1.623 - - - - - 0.765 0.858 - - solute carrier family 29 (equilibrative nucleoside transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-050220-15]
77. cul1a ENSDARG00000019239, ENSDARG00000113068, ENSDARG00000114068 2110 1.622 - - - - 0.879 - 0.743 - - cullin 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2603]
78. C5H9orf78 C5H9orf78 1550 1.618 - - - - - 0.743 - - 0.875
79. POLDIP3 ENSDARG00000099375 832 1.612 - - - - - 0.833 0.779 - - polymerase (DNA-directed), delta interacting protein 3 [Source:ZFIN;Acc:ZDB-GENE-120201-2]
80. ino80c ENSDARG00000055719 1512 1.609 - 0.730 - - 0.879 - - - - INO80 complex subunit C [Source:ZFIN;Acc:ZDB-GENE-040625-97]
81. dut ENSDARG00000106529 3120 1.607 - - - - 0.737 - - 0.870 - deoxyuridine triphosphatase [Source:ZFIN;Acc:ZDB-GENE-041010-93]
82. pdcd10a ENSDARG00000035054, ENSDARG00000109378 2227 1.607 - 0.752 - - - - 0.855 - - programmed cell death 10a [Source:ZFIN;Acc:ZDB-GENE-040426-1432]
83. IKZF2 ENSDARG00000069111 1366 1.604 - - - - 0.818 - - - 0.786 IKAROS family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-100922-169]
84. necap2 ENSDARG00000046002 4372 1.603 - - - - 0.876 0.727 - - - NECAP endocytosis associated 2 [Source:ZFIN;Acc:ZDB-GENE-050522-67]
85. pcf11 ENSDARG00000044625, ENSDARG00000114082 1885 1.599 - - - - - 0.839 - 0.760 - PCF11, cleavage and polyadenylation factor subunit [Source:ZFIN;Acc:ZDB-GENE-041114-175]
86. si:ch211-286b5.5 ENSDARG00000096661 3136 1.597 - - - - - - 0.837 - 0.760 si:ch211-286b5.5 [Source:ZFIN;Acc:ZDB-GENE-121214-209]
87. C21H5orf15 C21H5orf15 2318 1.593 - - - - - - 0.811 - 0.782
88. sf3b5 ENSDARG00000016855 4015 1.593 - 0.760 - - - - - 0.833 - splicing factor 3b, subunit 5 [Source:ZFIN;Acc:ZDB-GENE-040718-181]
89. ppp1cc 2361 1.591 - - - - - 0.768 0.823 - - protein phosphatase 1, catalytic subunit, gamma isozyme
90. psmc1a ENSDARG00000030537 2799 1.59 - 0.850 - - - - 0.740 - - proteasome 26S subunit, ATPase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8730]
91. lsr ENSDARG00000099291 881 1.589 - - - - - - 0.770 - 0.819 lipolysis stimulated lipoprotein receptor [Source:ZFIN;Acc:ZDB-GENE-050913-73]
92. rassf7a ENSDARG00000079917 162 1.587 - - - - - 0.842 0.745 - - Ras association (RalGDS/AF-6) domain family (N-terminal) member 7a [Source:ZFIN;Acc:ZDB-GENE-091013-3]
93. unga ENSDARG00000042527 1169 1.584 - - - 0.728 0.856 - - - - uracil DNA glycosylase a [Source:ZFIN;Acc:ZDB-GENE-040426-900]
94. smarcc1a ENSDARG00000017397 2957 1.583 - - - - - 0.781 - - 0.802 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1a [Source:ZFIN;Acc:ZDB-GENE-080514-3]
95. RUNDC1 ENSDARG00000091962 693 1.583 - - - - - 0.819 0.764 - - RUN domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25418]
96. FUZ ENSDARG00000079730 821 1.58 - - - - - - 0.749 - 0.831 fuzzy planar cell polarity protein [Source:ZFIN;Acc:ZDB-GENE-090609-2]
97. dck ENSDARG00000044807 510 1.579 - - - - - 0.774 - 0.805 - deoxycytidine kinase [Source:ZFIN;Acc:ZDB-GENE-041024-3]
98. atrip ENSDARG00000063076 385 1.578 - - - - - - 0.728 - 0.850 ATR interacting protein [Source:ZFIN;Acc:ZDB-GENE-050208-331]
99. man1b1 man1b1 3294 1.575 - - - - - - 0.761 - 0.814
100. daam1b ENSDARG00000009689 1520 1.575 - - - - - 0.726 0.849 - - dishevelled associated activator of morphogenesis 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4212]

There are 2214 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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