Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for pacsin3

Gene Name Gene ID Reads Annotation
pacsin3 ENSDARG00000099339 4668 protein kinase C and casein kinase substrate in neurons 3 [Source:ZFIN;Acc:ZDB-GENE-040426-984]










Genes with expression patterns similar to pacsin3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pacsin3 ENSDARG00000099339 4668 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 protein kinase C and casein kinase substrate in neurons 3 [Source:ZFIN;Acc:ZDB-GENE-040426-984]
2. rab10 ENSDARG00000046106 15618 2.476 - - - - 0.881 0.776 0.819 - - RAB10, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040718-304]
3. lima1 lima1 4760 1.901 - - - - 0.911 0.990 - - -
4. nuf2 ENSDARG00000034624 2252 1.863 - - - - 0.868 0.995 - - - NUF2, NDC80 kinetochore complex component, homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1121]
5. fam3c ENSDARG00000056152 3833 1.862 - - - - - 0.996 0.866 - - family with sequence similarity 3, member C [Source:ZFIN;Acc:ZDB-GENE-030131-6137]
6. alpi.1 ENSDARG00000015273 1712 1.845 - - - - - 0.995 0.850 - - alkaline phosphatase, intestinal, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050327-78]
7. LRP10 ENSDARG00000054539 1895 1.845 - - - - - 0.996 0.849 - - low density lipoprotein receptor-related protein 10 [Source:ZFIN;Acc:ZDB-GENE-140418-2]
8. pank1b ENSDARG00000010098 3202 1.837 - - - - 0.854 0.983 - - - pantothenate kinase 1b [Source:ZFIN;Acc:ZDB-GENE-070209-259]
9. MTMR11 ENSDARG00000069755 917 1.836 - 0.840 - - - 0.996 - - - myotubularin related protein 11 [Source:ZFIN;Acc:ZDB-GENE-130530-726]
10. nhsl1b ENSDARG00000042627 3697 1.827 - - - - - 0.993 0.834 - - NHS-like 1b [Source:ZFIN;Acc:ZDB-GENE-040910-1]
11. psma3 ENSDARG00000086618 6200 1.824 - 0.830 - - - 0.994 - - - proteasome subunit alpha 3 [Source:ZFIN;Acc:ZDB-GENE-050913-120]
12. ndrg2 ENSDARG00000011170 11442 1.821 - 0.824 - - - 0.997 - - - NDRG family member 2 [Source:ZFIN;Acc:ZDB-GENE-041212-15]
13. rab11a ENSDARG00000041450, ENSDARG00000109465 7418 1.804 - - - - - 0.966 0.838 - - RAB11a, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-041114-53]
14. loxl2b ENSDARG00000044074 1919 1.782 - - - - 0.927 - 0.855 - - lysyl oxidase-like 2b [Source:ZFIN;Acc:ZDB-GENE-050208-29]
15. tufm ENSDARG00000104173 9292 1.775 - 0.794 - - - 0.981 - - - Tu translation elongation factor, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-050320-73]
16. nefma ENSDARG00000021351 790 1.767 - - - - 0.922 - 0.845 - - neurofilament, medium polypeptide a [Source:ZFIN;Acc:ZDB-GENE-050522-205]
17. cd9b ENSDARG00000016691 15573 1.759 - - - - 0.890 0.869 - - - CD9 molecule b [Source:ZFIN;Acc:ZDB-GENE-040426-2768]
18. CU633999.1 ENSDARG00000098197 2880 1.757 - - - - 0.921 - 0.836 - -
19. med14 ENSDARG00000009953 1383 1.737 - - - - 0.892 - 0.845 - - mediator complex subunit 14 [Source:ZFIN;Acc:ZDB-GENE-030131-8867]
20. dpp9 ENSDARG00000052606 2279 1.734 - - - - 0.896 - 0.838 - - dipeptidyl-peptidase 9 [Source:ZFIN;Acc:ZDB-GENE-061013-777]
21. gapdhs ENSDARG00000039914 8760 1.729 - - - - - 0.912 0.817 - - glyceraldehyde-3-phosphate dehydrogenase, spermatogenic [Source:ZFIN;Acc:ZDB-GENE-020913-1]
22. ldha ENSDARG00000101251 10868 1.727 - 0.837 - - - 0.890 - - - lactate dehydrogenase A4 [Source:ZFIN;Acc:ZDB-GENE-991026-5]
23. pdcd5 ENSDARG00000026072 3135 1.72 - 0.835 - - 0.885 - - - - programmed cell death 5 [Source:ZFIN;Acc:ZDB-GENE-040426-980]
24. c5 ENSDARG00000021004 3536 1.714 - - - - - 0.911 0.803 - - complement component 5 [Source:ZFIN;Acc:ZDB-GENE-120510-2]
25. ccnd1 ENSDARG00000101637 34762 1.698 - - - - - 0.927 0.771 - - cyclin D1 [Source:ZFIN;Acc:ZDB-GENE-980526-176]
26. setbp1 ENSDARG00000093799 4499 1.689 - 0.841 - - - - 0.848 - - SET binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060526-72]
27. cdc42bpb ENSDARG00000019383 5976 1.68 - - - - 0.873 - 0.807 - - CDC42 binding protein kinase beta (DMPK-like) [Source:ZFIN;Acc:ZDB-GENE-030131-3647]
28. thbs4a ENSDARG00000102777 625 1.679 - 0.842 - - - - 0.837 - - thrombospondin 4a [Source:ZFIN;Acc:ZDB-GENE-080215-11]
29. zc4h2 ENSDARG00000015314, ENSDARG00000112180 5141 1.671 - 0.838 - - - - 0.833 - - zinc finger, C4H2 domain containing [Source:ZFIN;Acc:ZDB-GENE-030131-2207]
30. matn4 ENSDARG00000015947 10967 1.669 - - - - 0.802 0.867 - - - matrilin 4 [Source:ZFIN;Acc:ZDB-GENE-050208-64]
31. zgc:55461 ENSDARG00000116706, ENSDARG00000117112 2835 1.662 - - - - 0.900 - 0.762 - - zgc:55461 [Source:ZFIN;Acc:ZDB-GENE-040426-2879]
32. sord ENSDARG00000053405 2406 1.65 - 0.803 - - - - 0.847 - - sorbitol dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040426-1231]
33. met ENSDARG00000070903 2088 1.649 - 0.827 - - - - 0.822 - - MET proto-oncogene, receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-041014-1]
34. mlf2 ENSDARG00000034616, ENSDARG00000110660 14039 1.648 - - - - 0.841 0.807 - - - myeloid leukemia factor 2 [Source:ZFIN;Acc:ZDB-GENE-050913-67]
35. rbm4.2 ENSDARG00000055080 5241 1.647 - - - - 0.779 - 0.868 - - RNA binding motif protein 4.2 [Source:ZFIN;Acc:ZDB-GENE-030131-3019]
36. hexim1 ENSDARG00000036482 4317 1.635 - - - - 0.855 0.780 - - - hexamethylene bis-acetamide inducible 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4637]
37. TBC1D4 ENSDARG00000075156 2503 1.621 - - 0.798 - - - 0.823 - - TBC1 domain family, member 4 [Source:ZFIN;Acc:ZDB-GENE-030131-9881]
38. SRGAP3 ENSDARG00000060309 5353 1.584 - - - - 0.870 - 0.714 - - SLIT-ROBO Rho GTPase activating protein 3 [Source:ZFIN;Acc:ZDB-GENE-060524-4]
39. gnb2l1 61553 1.555 - - - - 0.716 0.839 - - - guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1
40. myl9b ENSDARG00000008030 7830 1.551 - - - - 0.752 - 0.799 - - myosin, light chain 9b, regulatory [Source:ZFIN;Acc:ZDB-GENE-040426-2296]
41. cnot3a ENSDARG00000007135 3084 1.55 0.714 - - - - - 0.836 - - CCR4-NOT transcription complex, subunit 3a [Source:ZFIN;Acc:ZDB-GENE-040927-6]
42. hmgb1a ENSDARG00000099175, ENSDARG00000114353 17231 1.548 - - - - 0.758 0.790 - - - high mobility group box 1a [Source:ZFIN;Acc:ZDB-GENE-030131-341]
43. NCOA7_1 NCOA7_1 3222 1.499 - 0.794 - - - - 0.705 - -
44. ces2 ENSDARG00000041569, ENSDARG00000110630 5541 1.442 - 0.730 - - - - 0.712 - - carboxylesterase 2 (intestine, liver) [Source:ZFIN;Acc:ZDB-GENE-061013-99]
45. sap18 ENSDARG00000057854, ENSDARG00000110983 3132 0.997 - - - - - 0.997 - - - Sin3A-associated protein [Source:ZFIN;Acc:ZDB-GENE-040426-1679]
46. mef2cb ENSDARG00000009418 1124 0.997 - - - - - 0.997 - - - myocyte enhancer factor 2cb [Source:ZFIN;Acc:ZDB-GENE-040901-7]
47. zgc:66479 ENSDARG00000008732 3347 0.997 - - - - - 0.997 - - - zgc:66479 [Source:ZFIN;Acc:ZDB-GENE-031030-10]
48. timm10b ENSDARG00000043898 1233 0.997 - - - - - 0.997 - - - translocase of inner mitochondrial membrane 10 homolog B (yeast) [Source:ZFIN;Acc:ZDB-GENE-050417-370]
49. hspb7 ENSDARG00000104441 1417 0.997 - - - - - 0.997 - - - heat shock protein family, member 7 (cardiovascular) [Source:ZFIN;Acc:ZDB-GENE-041010-136]
50. icln icln 1279 0.996 - - - - - 0.996 - - -
51. ufm1 ENSDARG00000043857 4152 0.996 - - - - - 0.996 - - - ubiquitin-fold modifier 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2930]
52. etf1 etf1 12861 0.996 - - - - - 0.996 - - -
53. hoxb1a ENSDARG00000008174 462 0.996 - - - - - 0.996 - - - homeobox B1a [Source:ZFIN;Acc:ZDB-GENE-990415-101]
54. mrps24 ENSDARG00000100116 1750 0.996 - - - - - 0.996 - - - mitochondrial ribosomal protein S24 [Source:ZFIN;Acc:ZDB-GENE-050522-393]
55. vps13a ENSDARG00000039225 3151 0.996 - - - - - 0.996 - - - vacuolar protein sorting 13 homolog A (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030926-1]
56. gopc ENSDARG00000023117 1206 0.996 - - - - - 0.996 - - - golgi-associated PDZ and coiled-coil motif containing [Source:ZFIN;Acc:ZDB-GENE-030131-5086]
57. cited2 ENSDARG00000030905 1319 0.996 - - - - - 0.996 - - - Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 [Source:ZFIN;Acc:ZDB-GENE-041010-141]
58. myo5b ENSDARG00000062003 653 0.996 - - - - - 0.996 - - - myosin VB [Source:ZFIN;Acc:ZDB-GENE-031219-7]
59. sart3 ENSDARG00000008032 2594 0.996 - - - - - 0.996 - - - squamous cell carcinoma antigen recognized by T cells 3 [Source:ZFIN;Acc:ZDB-GENE-040724-10]
60. kank2 ENSDARG00000018393 1804 0.996 - - - - - 0.996 - - - KN motif and ankyrin repeat domains 2 [Source:ZFIN;Acc:ZDB-GENE-040724-121]
61. FRG1 ENSDARG00000056504 1196 0.996 - - - - - 0.996 - - - FSHD region gene 1 [Source:ZFIN;Acc:ZDB-GENE-050417-324]
62. C19H1orf51 C19H1orf51 1776 0.996 - - - - - 0.996 - - -
63. nudcd2 ENSDARG00000078059, ENSDARG00000109490 2234 0.996 - - - - - 0.996 - - - NudC domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040801-49]
64. wwp2 ENSDARG00000061345 3459 0.996 - - - - - 0.996 - - - WW domain containing E3 ubiquitin protein ligase 2 [Source:ZFIN;Acc:ZDB-GENE-000607-82]
65. arl8ba ENSDARG00000006915 720 0.996 - - - - - 0.996 - - - ADP-ribosylation factor-like 8Ba [Source:ZFIN;Acc:ZDB-GENE-030131-9370]
66. CABZ01028296.1 CABZ01028296.1 6203 0.995 - - - - - 0.995 - - -
67. ldlrad3 ENSDARG00000078600 926 0.995 - - - - - 0.995 - - - low density lipoprotein receptor class A domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1533]
68. chst11 ENSDARG00000034375 2701 0.995 - - - - - 0.995 - - - carbohydrate (chondroitin 4) sulfotransferase 11 [Source:ZFIN;Acc:ZDB-GENE-040315-1]
69. cul1a ENSDARG00000019239, ENSDARG00000113068, ENSDARG00000114068 2110 0.995 - - - - - 0.995 - - - cullin 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2603]
70. olfml2bb ENSDARG00000021480 256 0.995 - - - - - 0.995 - - - olfactomedin-like 2Bb [Source:ZFIN;Acc:ZDB-GENE-070912-266]
71. hm13 ENSDARG00000037846 5019 0.995 - - - - - 0.995 - - - histocompatibility (minor) 13 [Source:ZFIN;Acc:ZDB-GENE-020802-3]
72. s1pr2 ENSDARG00000036548 1109 0.995 - - - - - 0.995 - - - sphingosine-1-phosphate receptor 2 [Source:ZFIN;Acc:ZDB-GENE-020123-2]
73. ctdspla ENSDARG00000071673 1447 0.995 - - - - - 0.995 - - - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like a [Source:ZFIN;Acc:ZDB-GENE-060825-333]
74. slc3a2a ENSDARG00000036427, ENSDARG00000112231 2967 0.995 - - - - - 0.995 - - - solute carrier family 3 (amino acid transporter heavy chain), member 2a [Source:ZFIN;Acc:ZDB-GENE-000831-3]
75. kifc3 ENSDARG00000054978 1220 0.995 - - - - - 0.995 - - - kinesin family member C3 [Source:ZFIN;Acc:ZDB-GENE-030131-3724]
76. tars ENSDARG00000013250, ENSDARG00000110996, ENSDARG00000113759 4599 0.995 - - - - - 0.995 - - - threonyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-041010-218]
77. ARHGAP35 2409 0.995 - - - - - 0.995 - - - Rho GTPase activating protein 35b, transcript variant X2
78. zgc:162945 ENSDARG00000028815, ENSDARG00000116996 439 0.995 - - - - - 0.995 - - - zgc:162945 [Source:ZFIN;Acc:ZDB-GENE-030131-3975]
79. thbs4b ENSDARG00000020072 2500 0.995 - - - - - 0.995 - - - thrombospondin 4b [Source:ZFIN;Acc:ZDB-GENE-020708-4]
80. ST7 ENSDARG00000039960, ENSDARG00000112691 2020 0.995 - - - - - 0.995 - - - suppression of tumorigenicity 7 [Source:ZFIN;Acc:ZDB-GENE-060421-2807]
81. flcn ENSDARG00000062385, ENSDARG00000116055 614 0.995 - - - - - 0.995 - - - folliculin [Source:ZFIN;Acc:ZDB-GENE-060421-3470]
82. larp1b ENSDARG00000061169 9939 0.995 - - - - - 0.995 - - - La ribonucleoprotein domain family, member 1B [Source:ZFIN;Acc:ZDB-GENE-030131-4154]
83. prpf6 ENSDARG00000091367 1868 0.995 - - - - - 0.995 - - - PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-2575]
84. zcchc7 ENSDARG00000055443 2159 0.995 - - - - - 0.995 - - - zinc finger, CCHC domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-030102-2]
85. thoc1 ENSDARG00000088246 1718 0.995 - - - - - 0.995 - - - THO complex 1 [Source:ZFIN;Acc:ZDB-GENE-030826-9]
86. fam50a ENSDARG00000024895 3020 0.995 - - - - - 0.995 - - - family with sequence similarity 50, member A [Source:ZFIN;Acc:ZDB-GENE-050417-110]
87. pir ENSDARG00000056638 722 0.995 - - - - - 0.995 - - - pirin [Source:ZFIN;Acc:ZDB-GENE-040718-288]
88. sufu ENSDARG00000056801 1543 0.995 - - - - - 0.995 - - - suppressor of fused homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-6223]
89. ube2g2 ENSDARG00000025404 1774 0.995 - - - - - 0.995 - - - ubiquitin-conjugating enzyme E2G 2 (UBC7 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-050417-288]
90. nudt3a ENSDARG00000016256 2713 0.995 - - - - - 0.995 - - - nudix (nucleoside diphosphate linked moiety X)-type motif 3a [Source:ZFIN;Acc:ZDB-GENE-040426-792]
91. si:dkeyp-27e10.3 ENSDARG00000063008 369 0.995 - - - - - 0.995 - - - si:dkeyp-27e10.3 [Source:ZFIN;Acc:ZDB-GENE-041210-96]
92. kif13ba ENSDARG00000079731 1726 0.994 - - - - - 0.994 - - - kinesin family member 13Ba [Source:ZFIN;Acc:ZDB-GENE-070521-1]
93. tpd52l2a ENSDARG00000027154 4359 0.994 - - - - - 0.994 - - - tumor protein D52-like 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7047]
94. myo1c myo1c 4978 0.994 - - - - - 0.994 - - -
95. mgat1b ENSDARG00000036065 996 0.994 - - - - - 0.994 - - - mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase b [Source:ZFIN;Acc:ZDB-GENE-061103-589]
96. UNCX ENSDARG00000102976 847 0.994 - - - - - 0.994 - - - UNC homeobox [Source:ZFIN;Acc:ZDB-GENE-080509-1]
97. pi4kaa ENSDARG00000076724 1949 0.994 - - - - - 0.994 - - - phosphatidylinositol 4-kinase, catalytic, alpha a [Source:ZFIN;Acc:ZDB-GENE-100204-2]
98. emc8 ENSDARG00000017093 1947 0.994 - - - - - 0.994 - - - ER membrane protein complex subunit 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2692]
99. pitx2 ENSDARG00000036194 2279 0.994 - - - - - 0.994 - - - paired-like homeodomain 2 [Source:ZFIN;Acc:ZDB-GENE-990714-27]
100. klhl40b ENSDARG00000019125 3633 0.994 - - - - - 0.994 - - - kelch-like family member 40b [Source:ZFIN;Acc:ZDB-GENE-060227-1]

There are 797 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA