Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for pabpn1l

Gene Name Gene ID Reads Annotation
pabpn1l ENSDARG00000087996, ENSDARG00000113382 40 poly(A) binding protein, nuclear 1-like (cytoplasmic) [Source:ZFIN;Acc:ZDB-GENE-080709-5]










Genes with expression patterns similar to pabpn1l

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pabpn1l ENSDARG00000087996, ENSDARG00000113382 40 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 poly(A) binding protein, nuclear 1-like (cytoplasmic) [Source:ZFIN;Acc:ZDB-GENE-080709-5]
2. ARSI_1 ARSI_1 38 2.637 - 0.832 - - - 0.889 - - 0.916
3. si:dkeyp-89c11.1 si:dkeyp-89c11.1 11 2.623 - 0.913 0.800 - - - 0.910 - -
4. NFATC4 ENSDARG00000054162 44 2.557 - - - - 0.786 0.873 - - 0.898 nuclear factor of activated T cells 4 [Source:ZFIN;Acc:ZDB-GENE-070912-659]
5. FP236789.1 ENSDARG00000105406 57 2.468 - 0.891 - - - - 0.861 - 0.716
6. snapc4 ENSDARG00000067673 81 2.218 - 0.719 - - 0.788 - 0.711 - - small nuclear RNA activating complex, polypeptide 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5794]
7. gdf9 ENSDARG00000003229 4 2 1.000 - - - - 1.000 - - - growth differentiation factor 9 [Source:ZFIN;Acc:ZDB-GENE-050221-7]
8. RBBP6_3 RBBP6_3 34 2 1.000 - - - - 1.000 - - -
9. mcm5_1 ENSDARG00000019507 10 2 1.000 - - - - 1.000 - - - minichromosome maintenance complex component 5 [Source:ZFIN;Acc:ZDB-GENE-021209-1]
10. rac1l_1 ENSDARG00000054649, ENSDARG00000096549 12 1.951 - - - - - 1.000 - - 0.951 Rac family small GTPase 1, like [Source:ZFIN;Acc:ZDB-GENE-060315-6]
11. CU184832.2 CU184832.2 35 1.928 - - - - - - 0.965 - 0.963
12. svopb ENSDARG00000014951 1 1.913 - 0.913 - - - 1.000 - - - SV2 related protein b [Source:ZFIN;Acc:ZDB-GENE-070705-359]
13. ENSDARG00000096199 ENSDARG00000096199 15 1.913 - 0.913 - - - 1.000 - - -
14. tas1r3 ENSDARG00000006341 3 1.913 1.000 0.913 - - - - - - - taste receptor, type 1, member 3 [Source:ZFIN;Acc:ZDB-GENE-070917-3]
15. CABZ01086354.1 CABZ01086354.1 22 1.913 - 0.913 - - - 1.000 - - -
16. snai3 ENSDARG00000031243 31 1.913 - 0.913 - - - 1.000 - - - snail family zinc finger 3 [Source:ZFIN;Acc:ZDB-GENE-061013-757]
17. GLIPR1 GLIPR1 37 1.909 - - - - - - 0.965 - 0.944
18. SLC47A1_2 SLC47A1_2 50 1.876 1.000 - - - - - 0.876 - -
19. brwd3 ENSDARG00000035540 92 1.863 - 0.863 - - - 1.000 - - - bromodomain and WD repeat domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-100921-43]
20. zgc:113030 ENSDARG00000069869 53 1.856 - 0.967 - - - - - - 0.889 zgc:113030 [Source:ZFIN;Acc:ZDB-GENE-050522-528]
21. zgc:173705 ENSDARG00000105137, ENSDARG00000114437 83 1.854 - 0.854 - - - 1.000 - - - zgc:173705 [Source:ZFIN;Acc:ZDB-GENE-080212-6]
22. rnf150a_1 ENSDARG00000024827 12 1.853 1.000 - - - - - 0.853 - - ring finger protein 150a [Source:ZFIN;Acc:ZDB-GENE-060213-1]
23. si:ch211-120c15.1 si:ch211-120c15.1 20 1.853 1.000 - - - - - 0.853 - -
24. adipoqa ENSDARG00000062228 7 1.853 1.000 - - - - - 0.853 - - adiponectin, C1Q and collagen domain containing, a [Source:ZFIN;Acc:ZDB-GENE-080423-2]
25. PROC PROC 11 1.853 - - - - - 1.000 0.853 - -
26. polm ENSDARG00000103470 49 1.853 - - - - - 1.000 0.853 - - polymerase (DNA directed), mu [Source:ZFIN;Acc:ZDB-GENE-040426-911]
27. si:dkeyp-69e1.9 si:dkeyp-69e1.9 29 1.836 - - 0.983 - - - 0.853 - -
28. GPR180 73 1.829 - - - - - - 0.919 - 0.910 G protein-coupled receptor 180, transcript variant X2
29. si:dkey-209n16.2 ENSDARG00000095914 27 1.822 1.000 0.822 - - - - - - - si:dkey-209n16.2 [Source:ZFIN;Acc:ZDB-GENE-110408-44]
30. RAB38 122 1.816 - 0.816 - - - 1.000 - - - RAB38, member RAS oncogene family
31. CR388132.1 ENSDARG00000097728 61 1.812 0.959 - - - - - 0.853 - -
32. efemp2b ENSDARG00000020811 116 1.796 1.000 - - - - - - - 0.796 EGF containing fibulin extracellular matrix protein 2b [Source:ZFIN;Acc:ZDB-GENE-030219-125]
33. luzp2 ENSDARG00000068247 80 1.79 1.000 - - - 0.790 - - - - leucine zipper protein 2 [Source:ZFIN;Acc:ZDB-GENE-060503-278]
34. Metazoa_SRP_25 Metazoa_SRP_25 13 1.786 - 0.913 - - - 0.873 - - -
35. PCBP3 ENSDARG00000054378 17 1.785 - - - 0.785 - 1.000 - - - poly(rC) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-050522-157]
36. CU856207.1 CU856207.1 87 1.776 - - - - 0.811 - 0.965 - -
37. LPL ENSDARG00000087697 18 1.771 1.000 - - - - - 0.771 - - lipoprotein lipase [Source:ZFIN;Acc:ZDB-GENE-990415-139]
38. rdh14a ENSDARG00000039299 79 1.767 1.000 0.767 - - - - - - - retinol dehydrogenase 14a [Source:ZFIN;Acc:ZDB-GENE-041010-124]
39. bmf2 ENSDARG00000041414, ENSDARG00000116024 18 1.767 - - 0.767 - - 1.000 - - - BCL2 modifying factor 2 [Source:ZFIN;Acc:ZDB-GENE-041210-319]
40. zgc:114081 ENSDARG00000057899, ENSDARG00000113048 5 1.766 - 0.913 - - - - 0.853 - - zgc:114081 [Source:ZFIN;Acc:ZDB-GENE-050913-78]
41. si:dkeyp-66a7.1 si:dkeyp-66a7.1 6 1.765 1.000 - - 0.765 - - - - -
42. mtnr1aa ENSDARG00000037545, ENSDARG00000114868 40 1.757 0.866 0.891 - - - - - - - melatonin receptor 1A a [Source:ZFIN;Acc:ZDB-GENE-990415-155]
43. zte25 zte25 29 1.756 - 0.883 - - - 0.873 - - -
44. ralgapa1 ENSDARG00000076889 36 1.751 - - - - - 1.000 0.751 - - Ral GTPase activating protein, alpha subunit 1 (catalytic) [Source:ZFIN;Acc:ZDB-GENE-080806-1]
45. lars2 ENSDARG00000075337 31 1.743 1.000 0.743 - - - - - - - leucyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-070928-3]
46. nudt18 ENSDARG00000041576 61 1.724 0.724 - - - - 1.000 - - - nudix (nucleoside diphosphate linked moiety X)-type motif 18 [Source:ZFIN;Acc:ZDB-GENE-050417-388]
47. ldhbb ENSDARG00000071076 31 1.721 - 0.721 - - - 1.000 - - - lactate dehydrogenase Bb [Source:ZFIN;Acc:ZDB-GENE-040718-176]
48. cryba2b ENSDARG00000041925 4329 1.719 0.719 - - - - 1.000 - - - crystallin, beta A2b [Source:ZFIN;Acc:ZDB-GENE-040718-324]
49. samsn1a ENSDARG00000054543 28 1.717 - - - - - 0.952 0.765 - - SAM domain, SH3 domain and nuclear localisation signals 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8639]
50. ZNFX1 ENSDARG00000100280 118 1.717 - 0.717 - - - 1.000 - - - zinc finger, NFX1-type containing 1 [Source:ZFIN;Acc:ZDB-GENE-110804-2]
51. dmrt1 ENSDARG00000007349 16 1.705 - - - - - 1.000 0.705 - - doublesex and mab-3 related transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-050511-1]
52. GPC5 GPC5 11 1.698 - 0.913 - 0.785 - - - - -
53. ncf1 ENSDARG00000033735 83 1.695 - 0.913 - - - - 0.782 - - neutrophil cytosolic factor 1 [Source:ZFIN;Acc:ZDB-GENE-031006-6]
54. calcr ENSDARG00000028845, ENSDARG00000109526 17 1.692 - 0.839 - - - - 0.853 - - calcitonin receptor [Source:ZFIN;Acc:ZDB-GENE-060503-420]
55. slc23a1 ENSDARG00000015033 40 1.687 - - - - - - 0.719 - 0.968 solute carrier family 23 (ascorbic acid transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-080804-2]
56. spi1b ENSDARG00000000767 88 1.684 - 0.913 - - - - 0.771 - - Spi-1 proto-oncogene b [Source:ZFIN;Acc:ZDB-GENE-980526-164]
57. wasb ENSDARG00000026350 139 1.669 0.812 - - - - 0.857 - - - Wiskott-Aldrich syndrome (eczema-thrombocytopenia) b [Source:ZFIN;Acc:ZDB-GENE-030131-7098]
58. BX119916.1 BX119916.1 19 1.66 - - - - - 0.775 0.885 - -
59. im:7154842 im:7154842 434 1.66 - 0.846 - - - - 0.814 - -
60. si:dkey-4c23.3 ENSDARG00000092028, ENSDARG00000110418 4 1.657 - 0.913 - - - 0.744 - - - si:dkey-4c23.3 [Source:ZFIN;Acc:ZDB-GENE-050208-668]
61. CR382327.4 CR382327.4 143 1.653 - 0.913 - - - - - - 0.740
62. efnb2b ENSDARG00000074050 77 1.652 - - - - - - 0.815 - 0.837 ephrin-B2b [Source:ZFIN;Acc:ZDB-GENE-010618-1]
63. spef2 ENSDARG00000098330 59 1.651 - - - - - - 0.758 - 0.893 sperm flagellar 2 [Source:ZFIN;Acc:ZDB-GENE-060526-47]
64. nanos3 ENSDARG00000068255 319 1.644 - - - - - 0.768 0.876 - - nanos homolog 3 [Source:ZFIN;Acc:ZDB-GENE-011221-1]
65. sfi1 ENSDARG00000053992 1075 1.63 0.872 - - - - - 0.758 - - SFI1 centrin binding protein [Source:ZFIN;Acc:ZDB-GENE-080206-4]
66. NACC2 160 1.621 - 0.768 - - - - 0.853 - - NACC family member 2
67. PDCL3 ENSDARG00000100651 164 1.618 - 0.857 - - - 0.761 - - - phosducin like 3 [Source:HGNC Symbol;Acc:HGNC:28860]
68. glis3 ENSDARG00000069726 59 1.607 - 0.889 - - - - 0.718 - - GLIS family zinc finger 3 [Source:ZFIN;Acc:ZDB-GENE-070112-2232]
69. trmt44 ENSDARG00000033957 133 1.602 - 0.867 - - 0.735 - - - - tRNA methyltransferase 44 homolog [Source:ZFIN;Acc:ZDB-GENE-041010-189]
70. dcaf5 ENSDARG00000060320 163 1.601 - 0.743 - - - 0.858 - - - ddb1 and cul4 associated factor 5 [Source:ZFIN;Acc:ZDB-GENE-060929-808]
71. AK9 ENSDARG00000021913 53 1.598 - - - - - - 0.824 - 0.774 adenylate kinase 9 [Source:ZFIN;Acc:ZDB-GENE-041014-337]
72. capslb ENSDARG00000003414 77 1.597 - - - - 0.744 - 0.853 - - calcyphosine-like b [Source:ZFIN;Acc:ZDB-GENE-050417-298]
73. zgc:112977 ENSDARG00000071741 109 1.597 0.705 - - - - - 0.892 - - zgc:112977 [Source:ZFIN;Acc:ZDB-GENE-050327-98]
74. TSHZ2 ENSDARG00000079201 301 1.587 0.868 - - - - - 0.719 - - teashirt zinc finger homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-100322-2]
75. ggh ENSDARG00000037176 9 1.586 0.825 - - - - 0.761 - - - gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase) [Source:ZFIN;Acc:ZDB-GENE-040426-2615]
76. si:ch211-13o20.1 si:ch211-13o20.1 30 1.574 - 0.719 - - - - 0.855 - -
77. pls1 ENSDARG00000039272 39 1.56 - 0.829 - - - 0.731 - - - plastin 1 (I isoform) [Source:ZFIN;Acc:ZDB-GENE-030131-6205]
78. efhc2 ENSDARG00000004204 59 1.55 - - - - 0.724 - 0.826 - - EF-hand domain (C-terminal) containing 2 [Source:ZFIN;Acc:ZDB-GENE-031001-10]
79. CR774186.2 CR774186.2 104 1.548 - - - - - - 0.728 - 0.820
80. RFFL ENSDARG00000042833 73 1.529 - 0.796 - - - - - - 0.733 ring finger and FYVE-like domain containing E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-040426-2274]
81. efcab2 ENSDARG00000074323 88 1.515 0.740 - - - - - 0.775 - - EF-hand calcium binding domain 2 [Source:ZFIN;Acc:ZDB-GENE-070521-5]
82. elf3 ENSDARG00000077982 211 1.506 - - - - - 0.702 0.804 - - E74-like factor 3 (ets domain transcription factor, epithelial-specific ) [Source:ZFIN;Acc:ZDB-GENE-030131-8760]
83. si:ch73-7i4.2 ENSDARG00000093998 154 1.492 0.743 - - - 0.749 - - - - si:ch73-7i4.2 [Source:ZFIN;Acc:ZDB-GENE-060810-137]
84. ZNF784_3 ZNF784_3 44 1.488 0.724 0.764 - - - - - - -
85. rasal3 ENSDARG00000089933 17 1.478 - - - 0.707 - - 0.771 - - RAS protein activator like 3 [Source:ZFIN;Acc:ZDB-GENE-101130-3]
86. arl14 ENSDARG00000063223 211 1.477 - 0.776 - - 0.701 - - - - ADP-ribosylation factor-like 14 [Source:ZFIN;Acc:ZDB-GENE-070705-288]
87. FAM120A ENSDARG00000075021 73 1.476 - - - 0.705 - - 0.771 - - family with sequence similarity 120A [Source:ZFIN;Acc:ZDB-GENE-110131-10]
88. ccl25b ENSDARG00000070873 454 1.459 - - - - - 0.705 0.754 - - chemokine (C-C motif) ligand 25b [Source:ZFIN;Acc:ZDB-GENE-110222-2]
89. esr2a ENSDARG00000016454 23 1 - - - - - 1.000 - - - estrogen receptor 2a [Source:ZFIN;Acc:ZDB-GENE-030116-2]
90. CABZ01080434.1 ENSDARG00000102438 4 1 - - - - - 1.000 - - -
91. jak3 ENSDARG00000010252 11 1 - - - - - 1.000 - - - Janus kinase 3 (a protein tyrosine kinase, leukocyte) [Source:ZFIN;Acc:ZDB-GENE-070725-4]
92. bmp1b ENSDARG00000028053 25 1 1.000 - - - - - - - - bone morphogenetic protein 1b [Source:ZFIN;Acc:ZDB-GENE-060818-2]
93. FP102786.1 ENSDARG00000090551 3 1 - - - - - 1.000 - - - GTPase IMAP family member 8-like [Source:NCBI gene;Acc:101882698]
94. zgc:153311 ENSDARG00000015964 85 1 - - - - - 1.000 - - - zgc:153311 [Source:ZFIN;Acc:ZDB-GENE-060825-194]
95. HIPK1 HIPK1 8 1 - - - - - 1.000 - - -
96. zgc:174688 zgc:174688 170 1 1.000 - - - - - - - -
97. cyp2aa2 ENSDARG00000104811 77 1 - - - - - 1.000 - - - y cytochrome P450, family 2, subfamily AA, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-061027-232]
98. zgc:171759_5 ENSDARG00000100259, ENSDARG00000109737, ENSDARG00000111964, ENSDARG00000114195, ENSDARG00000115938 274 1 1.000 - - - - - - - - zgc:171759 [Source:ZFIN;Acc:ZDB-GENE-071004-32]
99. hoxa4a 37 1 - - - - - 1.000 - - - homeobox A4a, transcript variant X4
100. prkacbb ENSDARG00000059125 7 1 - - - - - 1.000 - - - protein kinase, cAMP-dependent, catalytic, beta b [Source:ZFIN;Acc:ZDB-GENE-050904-4]

There are 1435 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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