Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for pabpc4

Gene Name Gene ID Reads Annotation
pabpc4 ENSDARG00000059259, ENSDARG00000111312 2392 poly(A) binding protein, cytoplasmic 4 (inducible form) [Source:ZFIN;Acc:ZDB-GENE-030131-9663]










Genes with expression patterns similar to pabpc4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pabpc4 ENSDARG00000059259, ENSDARG00000111312 2392 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 poly(A) binding protein, cytoplasmic 4 (inducible form) [Source:ZFIN;Acc:ZDB-GENE-030131-9663]
2. bin1 bin1 3199 4.674 0.855 0.819 0.767 - 0.761 - 0.729 - 0.743
3. klhl41b ENSDARG00000006757 10762 4.64 0.823 - 0.715 - 0.713 0.797 0.864 - 0.728 kelch-like family member 41b [Source:ZFIN;Acc:ZDB-GENE-030131-9875]
4. nexn ENSDARG00000057317 10972 4.08 0.836 - 0.778 - - 0.853 0.888 - 0.725 nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
5. CR354540.2 ENSDARG00000117517 18452 3.935 0.796 - 0.739 - - - 0.842 0.703 0.855
6. sgcd ENSDARG00000098573 4980 3.88 0.720 0.821 0.823 - - - 0.813 - 0.703 sarcoglycan, delta (dystrophin-associated glycoprotein) [Source:ZFIN;Acc:ZDB-GENE-030131-3684]
7. tnnt3a ENSDARG00000030270 112506 3.807 0.820 - 0.752 - - - 0.701 0.707 0.827 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
8. CR847973.1 ENSDARG00000115516 8754 3.378 0.867 - - - - 0.860 0.873 - 0.778
9. ldb3a ENSDARG00000056322, ENSDARG00000116388 2569 3.298 0.787 - - - - 0.894 0.884 - 0.733 LIM domain binding 3a [Source:ZFIN;Acc:ZDB-GENE-040121-6]
10. C13H10orf71 3489 3.294 0.816 - 0.775 - - - 0.905 - 0.798 chromosome 13 C10orf71 homolog
11. trdn ENSDARG00000041779 4283 3.286 0.807 - 0.746 - - - 0.924 - 0.809 triadin [Source:ZFIN;Acc:ZDB-GENE-041014-193]
12. myom1a ENSDARG00000061249 10230 3.24 - - 0.794 - - 0.851 0.870 - 0.725 myomesin 1a (skelemin) [Source:ZFIN;Acc:ZDB-GENE-030131-2856]
13. fxr2 ENSDARG00000016260, ENSDARG00000116730 10030 3.178 0.786 - - - 0.770 0.738 0.884 - - fragile X mental retardation, autosomal homolog 2 [Source:ZFIN;Acc:ZDB-GENE-040426-943]
14. zgc:92518 ENSDARG00000016343 3837 3.171 0.782 - - - 0.718 0.846 0.825 - - zgc:92518 [Source:ZFIN;Acc:ZDB-GENE-040718-53]
15. PTPLA PTPLA 4044 3.168 0.800 - - - - 0.764 0.841 - 0.763
16. NRAP ENSDARG00000009341 3565 3.166 0.774 - 0.711 - - 0.814 0.867 - - nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
17. BX324201.1 BX324201.1 3302 3.142 0.811 - 0.747 - - - 0.876 - 0.708
18. flncb ENSDARG00000018820 5595 3.134 0.796 0.788 - - - 0.757 0.793 - - filamin C, gamma b (actin binding protein 280) [Source:ZFIN;Acc:ZDB-GENE-041008-175]
19. SPEG SPEG 4017 3.13 0.710 - 0.734 - - - 0.890 - 0.796
20. zgc:92113 1738 3.126 0.714 - - - - 0.821 0.887 - 0.704 zgc:92113
21. jph2 ENSDARG00000028625 6706 3.124 0.746 - - - - 0.760 0.852 - 0.766 junctophilin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9848]
22. SYNPO2L SYNPO2L 6697 3.111 0.798 - 0.733 - - 0.823 - - 0.757
23. mdh1b ENSDARG00000018008 3196 3.109 0.762 - 0.798 - - - 0.826 - 0.723 malate dehydrogenase 1B, NAD (soluble) [Source:ZFIN;Acc:ZDB-GENE-060929-384]
24. prx ENSDARG00000017246 6183 3.099 0.703 - 0.762 - - - 0.896 - 0.738 periaxin [Source:ZFIN;Acc:ZDB-GENE-030131-5790]
25. ttnb ttnb 73721 3.078 - - 0.803 - - 0.770 - 0.729 0.776
26. atp2a1 ENSDARG00000020574 291561 3.067 0.828 - 0.729 - - - 0.737 - 0.773 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
27. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 3.05 0.758 - 0.740 - - 0.738 0.814 - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
28. MYOM1 MYOM1 3870 3.04 0.749 - 0.731 - - - 0.835 - 0.725
29. myod1 ENSDARG00000030110 6019 2.574 0.834 - - - - 0.931 0.809 - - myogenic differentiation 1 [Source:ZFIN;Acc:ZDB-GENE-980526-561]
30. smtnl1 ENSDARG00000041257 7410 2.564 0.825 - - - - 0.835 0.904 - - smoothelin-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-23]
31. srl ENSDARG00000104587 11126 2.555 0.895 - 0.745 - - - 0.915 - - sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]
32. atp1b3b ENSDARG00000042837 5163 2.519 0.708 - - - - 0.889 0.922 - - ATPase Na+/K+ transporting subunit beta 3b [Source:ZFIN;Acc:ZDB-GENE-001127-1]
33. trim63 trim63 2437 2.517 - 0.848 - - - 0.812 0.857 - -
34. tgm2a ENSDARG00000070157 4516 2.516 0.835 - - - - 0.825 0.856 - - transglutaminase 2, C polypeptide A [Source:ZFIN;Acc:ZDB-GENE-040912-78]
35. stac3 ENSDARG00000098883 1765 2.504 0.807 - - - - 0.862 0.835 - - SH3 and cysteine rich domain 3 [Source:ZFIN;Acc:ZDB-GENE-040801-248]
36. ryr1b ENSDARG00000023797 5693 2.502 - - 0.810 - - - 0.876 - 0.816 ryanodine receptor 1b (skeletal) [Source:ZFIN;Acc:ZDB-GENE-070705-417]
37. ppapdc3 ppapdc3 4924 2.49 0.722 - - - - 0.853 0.915 - -
38. neb ENSDARG00000032630, ENSDARG00000109273 19493 2.484 0.788 - 0.803 - - - - - 0.893 nebulin [Source:ZFIN;Acc:ZDB-GENE-041111-216]
39. si:ch211-156j16.1 ENSDARG00000092035 7441 2.478 0.879 - 0.777 - - - 0.822 - - si:ch211-156j16.1 [Source:ZFIN;Acc:ZDB-GENE-030131-4106]
40. xirp2a ENSDARG00000071113 7113 2.475 0.891 - - - - 0.702 0.882 - - xin actin binding repeat containing 2a [Source:ZFIN;Acc:ZDB-GENE-040108-7]
41. gypc ENSDARG00000041546 1487 2.471 0.766 - - - - 0.878 0.827 - - glycophorin C (Gerbich blood group) [Source:ZFIN;Acc:ZDB-GENE-030131-7930]
42. fitm1 ENSDARG00000056464 1759 2.46 0.858 - 0.785 - - - 0.817 - - fat storage-inducing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-050306-28]
43. chrna1 ENSDARG00000009021 2931 2.459 0.817 - - - - 0.811 0.831 - - cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
44. ryr3 ENSDARG00000071331 6795 2.457 - - - - - 0.726 0.894 - 0.837 ryanodine receptor 3 [Source:ZFIN;Acc:ZDB-GENE-041001-165]
45. sh3bgr ENSDARG00000021633 3498 2.454 0.836 - - - - 0.751 0.867 - - SH3 domain binding glutamate-rich protein [Source:ZFIN;Acc:ZDB-GENE-040801-27]
46. BX294434.1 ENSDARG00000061272 6493 2.444 0.799 - - - - - 0.880 - 0.765 solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
47. svila ENSDARG00000055075, ENSDARG00000110002, ENSDARG00000114888 4078 2.439 0.775 - 0.755 - - - 0.909 - - supervillin a [Source:ZFIN;Acc:ZDB-GENE-990706-5]
48. DUSP27 ENSDARG00000099889 1197 2.435 0.768 - - - - 0.761 0.906 - - dual specificity phosphatase 27 [Source:ZFIN;Acc:ZDB-GENE-140513-1]
49. smyd1a ENSDARG00000009280 1503 2.429 0.744 - - - - 0.801 0.884 - - SET and MYND domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9825]
50. sptb ENSDARG00000030490 7128 2.429 0.807 - 0.726 - - - 0.896 - - spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
51. smpx ENSDARG00000045302 2175 2.427 0.728 - - - - 0.803 0.896 - - small muscle protein X-linked [Source:ZFIN;Acc:ZDB-GENE-040704-24]
52. si:ch211-255p10.3 ENSDARG00000096616 8336 2.423 - - - - - 0.824 0.764 - 0.835 si:ch211-255p10.3 [Source:ZFIN;Acc:ZDB-GENE-121214-339]
53. MYOM3 2720 2.417 0.782 - - - - 0.785 0.850 - - myomesin 3, transcript variant X2
54. hhatla ENSDARG00000039051 6598 2.417 0.764 - - - - - 0.858 - 0.795 hedgehog acyltransferase like, a [Source:ZFIN;Acc:ZDB-GENE-040426-1865]
55. rbfox1l ENSDARG00000021184, ENSDARG00000111700 26249 2.414 - - 0.796 - - - 0.844 - 0.774 RNA binding fox-1 homolog 1, like [Source:ZFIN;Acc:ZDB-GENE-040923-2]
56. slc16a3 ENSDARG00000045051 818 2.414 - - - - - 0.820 0.846 - 0.748 solute carrier family 16 (monocarboxylate transporter), member 3 [Source:ZFIN;Acc:ZDB-GENE-030131-5487]
57. tnnc1b ENSDARG00000037539 13945 2.413 - - 0.751 - - 0.748 0.914 - - troponin C type 1b (slow) [Source:ZFIN;Acc:ZDB-GENE-040625-62]
58. rtn2a ENSDARG00000016088 12184 2.412 0.755 - 0.761 - - - 0.896 - - reticulon 2a [Source:ZFIN;Acc:ZDB-GENE-060420-1]
59. MYOT ENSDARG00000076312 1791 2.408 0.783 - - - - 0.826 0.799 - - myotilin [Source:ZFIN;Acc:ZDB-GENE-110411-129]
60. ITGB1BP2 ENSDARG00000030176 2472 2.407 0.777 - - - - 0.819 0.811 - - integrin subunit beta 1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:6154]
61. myoz2b ENSDARG00000037266 2139 2.392 0.760 - - - - 0.723 0.909 - - myozenin 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1853]
62. mafa ENSDARG00000015890 2140 2.391 0.766 - - - - 0.810 0.815 - - v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog a (paralog a) [Source:ZFIN;Acc:ZDB-GENE-010605-2]
63. ttna ttna 101197 2.387 0.749 - 0.788 - - - - - 0.850
64. znf106a ENSDARG00000016651 6049 2.381 0.751 - - - - - 0.865 - 0.765 zinc finger protein 106a [Source:ZFIN;Acc:ZDB-GENE-040718-21]
65. TRIM63 TRIM63 1600 2.376 0.746 - - - - 0.805 0.825 - -
66. usp2a ENSDARG00000020107 2586 2.376 0.796 - - - - 0.745 0.835 - - ubiquitin specific peptidase 2a [Source:ZFIN;Acc:ZDB-GENE-041212-59]
67. cacng1 cacng1 3118 2.375 0.779 - - - - 0.800 0.796 - -
68. TMPO TMPO 3264 2.374 0.814 - 0.742 - - - 0.818 - -
69. mybpc2b ENSDARG00000021265 9618 2.372 0.805 - - - - - 0.839 - 0.728 myosin binding protein C, fast type b [Source:ZFIN;Acc:ZDB-GENE-050320-80]
70. pbxip1a ENSDARG00000071015 4960 2.37 0.749 - 0.776 - - - 0.845 - - pre-B-cell leukemia homeobox interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-060503-871]
71. tmx2a ENSDARG00000079122, ENSDARG00000109756 1156 2.365 0.807 0.845 - - - - 0.713 - - thioredoxin-related transmembrane protein 2a [Source:ZFIN;Acc:ZDB-GENE-050208-95]
72. tnnt2d ENSDARG00000002988 7590 2.364 0.726 - - - - - 0.909 - 0.729 troponin T2d, cardiac [Source:ZFIN;Acc:ZDB-GENE-050626-97]
73. tbx15 ENSDARG00000002582 755 2.364 0.711 - - - - 0.790 0.863 - - T-box 15 [Source:ZFIN;Acc:ZDB-GENE-020529-1]
74. parvb ENSDARG00000019117 1042 2.361 0.750 - - - - 0.747 0.864 - - parvin, beta [Source:ZFIN;Acc:ZDB-GENE-030131-4411]
75. CR392006.1 CR392006.1 1401 2.356 0.727 - - - - 0.746 0.883 - -
76. cmya5 ENSDARG00000061379 1423 2.348 0.704 - - - - 0.852 0.792 - - cardiomyopathy associated 5 [Source:ZFIN;Acc:ZDB-GENE-070630-1]
77. tmem38a ENSDARG00000024047 41883 2.347 0.840 - 0.795 - 0.712 - - - - transmembrane protein 38A [Source:ZFIN;Acc:ZDB-GENE-040426-1888]
78. klhl40a ENSDARG00000039052 2537 2.338 0.766 - - - - 0.726 0.846 - - kelch-like family member 40a [Source:ZFIN;Acc:ZDB-GENE-050916-1]
79. tmem161a ENSDARG00000012790 16094 2.334 0.807 - 0.797 - - - - - 0.730 transmembrane protein 161A [Source:ZFIN;Acc:ZDB-GENE-041111-267]
80. EHBP1L1 EHBP1L1 2500 2.332 0.763 - 0.736 - - - 0.833 - -
81. acta1b ENSDARG00000055618 195597 2.331 0.821 - 0.778 - - 0.732 - - - actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
82. METTL21C METTL21C 1717 2.331 0.784 - - - 0.768 - 0.779 - -
83. jph1a ENSDARG00000058603 2852 2.321 - - - - - 0.709 0.814 - 0.798 junctophilin 1a [Source:ZFIN;Acc:ZDB-GENE-040724-233]
84. cap2 ENSDARG00000104478 3266 2.319 0.762 - - - - - 0.838 - 0.719 CAP, adenylate cyclase-associated protein, 2 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1758]
85. txlnba ENSDARG00000020594 9385 2.317 - - 0.729 - 0.709 - 0.879 - - taxilin beta a [Source:ZFIN;Acc:ZDB-GENE-030131-322]
86. smyd2b ENSDARG00000005629 8181 2.317 0.772 - - - - 0.817 - - 0.728 SET and MYND domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-041001-201]
87. slc6a8 ENSDARG00000043646 1114 2.308 0.708 0.853 - - - - 0.747 - - solute carrier family 6 (neurotransmitter transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-071024-2]
88. lama2 ENSDARG00000099390 24734 2.305 0.821 - - - - - 0.777 - 0.707 laminin, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-060119-1]
89. mylz3 ENSDARG00000017441 303597 2.304 0.773 - 0.777 - - - - - 0.754 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
90. COMP 2018 2.302 - 0.846 - - - 0.720 0.736 - - cartilage oligomeric matrix protein, transcript variant X1
91. DUSP26 ENSDARG00000103752 404 2.301 0.726 - - - - 0.776 0.799 - - dual specificity phosphatase 26 [Source:HGNC Symbol;Acc:HGNC:28161]
92. txlnbb ENSDARG00000076241 6396 2.299 0.775 - 0.713 - - - 0.811 - - taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
93. myl1 ENSDARG00000014196 98943 2.297 0.746 - 0.780 - - 0.771 - - - myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
94. ms4a17a.14 829 2.286 - - - - - 0.818 0.722 - 0.746 membrane-spanning 4-domains, subfamily A, member 17A.14
95. calm1b ENSDARG00000034187 13158 2.282 0.777 - 0.741 - - 0.764 - - - calmodulin 1b [Source:ZFIN;Acc:ZDB-GENE-030804-2]
96. TENC1 TENC1 1729 2.282 0.703 - - - - 0.738 0.841 - -
97. ckma ENSDARG00000035327, ENSDARG00000114671 418792 2.274 0.783 - - - - 0.759 - - 0.732 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
98. tpma ENSDARG00000033683 752432 2.273 0.802 - 0.727 - - - 0.744 - - alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
99. kcnma1a ENSDARG00000079840 2584 2.271 0.842 - 0.711 - - - 0.718 - - potassium large conductance calcium-activated channel, subfamily M, alpha member 1a [Source:ZFIN;Acc:ZDB-GENE-070202-9]
100. scn4ba ENSDARG00000099031 1634 2.268 - - - - - 0.702 0.752 - 0.814 sodium channel, voltage-gated, type IV, beta a [Source:ZFIN;Acc:ZDB-GENE-070615-18]

There are 1079 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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